Alternaria alternata: CC77DRAFT_968752
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Entry
CC77DRAFT_968752 CDS
T05291
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
aalt
Alternaria alternata
Pathway
aalt03030
DNA replication
aalt03410
Base excision repair
aalt03420
Nucleotide excision repair
aalt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CC77DRAFT_968752
03410 Base excision repair
CC77DRAFT_968752
03420 Nucleotide excision repair
CC77DRAFT_968752
03430 Mismatch repair
CC77DRAFT_968752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalt03032
]
CC77DRAFT_968752
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_968752
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_968752
DNA replication proteins [BR:
aalt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CC77DRAFT_968752
DNA Replication Termination Factors
ELG1-RFC complex
CC77DRAFT_968752
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CC77DRAFT_968752
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CC77DRAFT_968752
Check point factors
HRAD17(Rad24)-RFC complex
CC77DRAFT_968752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
Viral_helicase1
Gp44_lid
nSTAND3
RCF1-5-like_lid
RuvB_N
AAA_3
Mg_chelatase
Rad17
AAA_19
AAA_assoc_2
AAA_11
MeaB
DNAX_ATPase_lid
NTPase_1
AAA_24
AAA_30
NB-ARC
Motif
Other DBs
NCBI-GeneID:
29121370
NCBI-ProteinID:
XP_018382825
JGI:
968752
UniProt:
A0A177DC53
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MSKAESSKAAASNGVKPNPNAAGGANYELPWVEKYRPVYLDDVVGNTETIERLKIIAKDG
NMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKK
VTLAPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAI
LRYARLTDAQVVRRVMQICEAEDVKYSDDGIAALVFSAEGDMRQAINNLQSTFAGFGFVN
GDNVFRVVDSPHPIKVQAMIKACHEQRIDDALASLKELWDLGYSCHDIISTMFKVTKTID
TLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCVARLCKINMQPQLFALPTTSK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccgaatcttccaaagcagctgccagcaatggtgtcaaaccaaatcccaac
gctgctggtggtgctaactatgaactgccatgggtagagaaataccgtcccgtctacctc
gatgatgtcgtcggcaacactgaaaccattgaacgcctcaagatcattgccaaagacggt
aacatgccacatatgatcatctctggcatgcctggtatcggcaaaaccacgtccatcctc
tgtctcgcacgccagctcctcggtgacgcctacaaagaggctgttctcgaactcaacgcc
tctgacgagcgtggtatcgacgtcgtacgcaacaggataaagggcttcgcgcagaagaaa
gtcacacttgcaccaggcaggcaaaagctcgtcattctggatgaggcggacagcatgacc
agcggtgcgcagcaagccctgaggaggacaatggagatctacagtgcaacaacacggttt
gcattcgcttgcaaccagtcgaacaagatcattgagccgctgcagtcgagatgtgccata
ctcagatacgctcgccttaccgatgcgcaagtcgtgcgccgcgttatgcagatctgcgag
gccgaggacgtaaagtattcagacgatgggattgcggcactcgtcttctccgctgaggga
gatatgcgacaagctatcaacaacctacagtcgacattcgctggtttcggctttgtaaac
ggcgacaatgtcttcagagtggtcgacagcccgcatcccatcaaagtgcaagccatgatc
aaggcgtgccacgagcagcgcatcgatgatgccttggcgtcgttgaaagagctctgggat
ttaggatattcatgccacgatattatcagcacaatgttcaaagttactaagaccattgat
acgctgagtgagcacgcgaagttggagttcatcaaggaaattggcttcacccacatgcgc
atcctcgaaggcgtgcaaacacttctacagctatccggctgcgttgcgcgcttgtgcaag
atcaacatgcagccgcaattgttcgccctccccacgacgtcgaagtaa
DBGET
integrated database retrieval system
