KEGG   Alternaria alternata: CC77DRAFT_976496
Entry
CC77DRAFT_976496  CDS       T05291                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12880  THO complex subunit 3
Organism
aalt  Alternaria alternata
Pathway
aalt03013  Nucleocytoplasmic transport
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_976496
  09122 Translation
   03013 Nucleocytoplasmic transport
    CC77DRAFT_976496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_976496
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_976496
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CC77DRAFT_976496
Spliceosome [BR:aalt03041]
 Complex C
  Other components
   EJC/TREX
    CC77DRAFT_976496
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CC77DRAFT_976496
SSDB
Motif
Pfam: Beta-prop_THOC3 adh_short adh_short_C2 Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd KR Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_Aladin SDR Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Glyco_tran_WecG Polysacc_synt_2
Other DBs
NCBI-GeneID: 29121538
NCBI-ProteinID: XP_018379165
JGI: 976496
UniProt: A0A177D292
LinkDB
Position
Unknown
AA seq 657 aa
MAPPIRARSIKSDAFHEHFRKLKTSVYQDSPRPNAVSTSHYIRSISWNASGTFIATGAAD
RTLRIWNPEKTNSKNSTELRTPNTTASLERVSFHPINENELASATSDGMVRFWDIRSKAS
VGEVKVGECPFTLAWTPDGNGLVAGRKDNLLTTIDRSTLSVVSEHQQVYQTNQCVFDWSG
NHLYSTVGDGSVRLLKYPSFENTLTLNAHTSACYAVSLSPSGEYLAAGGGDALISLWDTQ
EWICTRTLELTGGIIKSVDFSFDGSYVTAGSDDKEEKKIRIAHVHTGEIVHTIDVPTPAL
HVAWHPCRYILAYSAENLGLKIIPSDYHYTIYDSIIMDVTTPIRPADLFSAKGLVVIITG
GGSGLGLAIASALHQNGAERVYLLGRRADVLDNAANNLQSNTPRTSQSSSGSVHGIPCDV
TDLTSVRAAAETIKKDIGYVDVLINNAGVIGPKNGADIYKAESIQQLADTMVAGYDDWSQ
AMAINTQSVIGVSATFLPLLEAANTRRGWAPGKVTGTGNARARDTSAAEANGIDTDDDRM
AHIITVASVASYMRWISAGLAYNASKAAAAHLGKMMATFLSEWGVRSNIVCPGPYPSEMT
AGIHPVYGTNQIPQGRMGGIGDISGLMLFLVGKGGAYVNGTTQLTDGGRVGVFPAVY
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggcgcccccgatacgtgcgcgctcaatcaagtcagacgctttccacgaacacttcagg
aagctcaaaacatcagtctaccaagacagtccccgcccaaacgccgtatccacctcgcac
tacatccgctcaatatcctggaatgcgtctggtacatttattgcaacgggtgccgcggac
aggacactgcgcatctggaaccctgaaaagaccaattccaagaactcgactgagttgcgc
acgcccaacacgacggcctcgctagagcgcgtttcctttcacccaatcaacgagaacgag
ctggcaagcgctacttcagatggcatggtcaggttctgggacatacggtccaaagctagc
gtgggtgaagtcaaggttggcgagtgcccgtttacgctggcgtggacaccagatggcaac
ggactggtcgcaggaagaaaggataatctcctcaccaccatcgatcgatcgacgctcagc
gtcgtctcggagcaccaacaagtctaccaaaccaaccaatgcgtcttcgactggtcaggc
aaccacctctactcgacagtcggcgacggcagtgtgcgactcctgaaatacccgtcgttt
gagaatacgctcacactcaatgctcacacctcggcatgctacgccgtatcactatcaccc
agcggcgagtatctggcggctggtggcggtgacgcgctcatctcgctctgggatacacag
gaatggatatgcacacgcacgctggaattgacgggcggtatcatcaagtcggtcgacttc
tccttcgacggcagctacgtcactgctggctccgacgacaaagaggagaagaagattcgt
attgcgcacgttcatactggcgagattgtacacacgattgatgttccaacaccggcatta
catgtcgcctggcatccatgccggtacatactggcgtattcggcggaaaacctgggattg
aagattataccttcggattaccactacaccatctacgactctatcatcatggatgtaaca
acgccaatcaggccagccgatctcttctcagcgaaaggactagtagtaatcataacaggc
ggaggcagcggtctcggtctcgccatcgcatccgccctacaccagaatggcgctgaacgc
gtatacctcctcggccggcgcgccgacgtgctcgacaacgccgccaacaacctccaatcc
aatacaccgcgcacctcgcaaagcagcagcggctccgtccatggcatcccctgcgacgta
acagacctgacctctgtccgggccgccgccgaaaccataaagaaggacattggctatgtc
gacgtcctgatcaacaacgcgggtgtcatcggacccaaaaacggcgccgacatctacaaa
gcagagtcgatccaacaactcgccgacaccatggtcgccggctacgacgactggtcccaa
gccatggctatcaacacgcaatccgtcatcggcgtcagcgctaccttcctccctctcctc
gaagcagcaaacacacgccgcggatgggctccgggcaaagtaacaggcacaggcaatgcg
cgggcgcgcgatacttccgccgcggaggccaacggcatcgataccgacgacgaccgcatg
gcgcacatcatcaccgtcgcgtcagtcgcgtcgtatatgcgctggatatccgcgggtctg
gcgtacaatgctagtaaagcggcggctgcacacttgggcaagatgatggcaacgttcttg
tccgagtggggtgtcaggagtaatatcgtttgtccagggccttatccgagtgagatgacg
gctggtatacacccggtttatggcacgaatcagattccgcaggggaggatgggcgggatt
ggtgatattagcggattgatgcttttcttggttggtaaaggtggggcctatgtcaatggg
actacgcagcttactgatggtgggagggtgggcgtgtttcctgctgtgtattag

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