Alternaria alternata: CC77DRAFT_980593
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Entry
CC77DRAFT_980593 CDS
T05291
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aalt
Alternaria alternata
Pathway
aalt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC77DRAFT_980593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_980593
Enzymes [BR:
aalt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC77DRAFT_980593
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CC77DRAFT_980593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YscO-like
Motif
Other DBs
NCBI-GeneID:
29121657
NCBI-ProteinID:
XP_018390810
JGI:
980593
UniProt:
A0A177E323
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MEAPRTSAKQQVVDRIPARIKHIQFGIYSNQDIVNQAVLEVSDRNVYDLQPAADGTRSLT
ANGPMDTHMGISSKQGKCGTCGEGLDKCNGHFGHIKLALPAFHVGYLKHIIEVLNCICKD
CSRVLLDEVERRRYLRSMRRPDMDTLRKGAVTKKILDDCRKKKTCPYCGALQGTVRKVPG
HPLKIIHNRYDAFNRSTAKTKKPPAGKIEFDQSFDAAKSANPDLDKHLKKAVDDMHPLRT
LNLFKKISPEDCELLAMIPEDARPEMLIWEYMPVPPVALRPSVMQEGGATEDDVTNKIGD
ICQISSIIRAGLARGFPLQILMEQWDFLQLQIAMYINSDAPGLKQQGLQKTMRGFSQRLK
GKGGRFRQNLSGKRVDFSGRTVIGPDPNLSIDEVAVPERIAKNLTYPEKATRYNIDKLRR
LVKNGSNRYPGANYIISDQGPNKEPSKTSLIGLSRFDTTGERLEGASKRLKIGDIVERHI
EDGDIVLFNRQPSLHKLSILSHRAKVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEE
ARTEATELMGVKYNLATPKNGTPIIAAIQDFITAAYLLSNKNNFYDRRTFCQIVNYMFNG
EGAFDPDTGKKHPIDIPPPVVWKPQALWTGKQVFNLLMKPYKGCRVLINLEAACKQFKNT
PDQAPDLNENDAYLVIRNSEVMCGVMDKATVGDGKKDSVFYVMMRDFGPDHAVQGMNRLS
KLSARWLSNNGFSLGISDVTPGEKLNKKKQDLVEEAYAKCDKLIKDFKEGKLQRDPGCDE
EQTMENRIGGILSGVRQAAGDICFEELSRWNSPLLMAKCGSKGSNINVSQMVASVGQQMI
GGARVADGFHHRTLPHFPKAARQPASKGFVSNSFFSGLTPSEFIFHAMSGREGLVDTAVK
TAETGYMSRRLMKSLEDLSAQYDDTVRNSSGTVVQFQYGDDNLDPVDMEGKAKPVHFDRT
FSHAVTSTWDNSESGLTPEEVKEYTEARLNTERNKYPRYKLDGVTPLEYRDRTDAGIDQK
ESMRDFLDTVQDYVFKKAKKLETTLAYLGVVQPDGRKDRKQSAADAEKYSLADGIAKISH
SALDAFITLCLTKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVP
RIKEIINASSTISTPVIACDLSNKVSESAARIVKARVEKTYLRDVISYVEDVWHPTGAYI
AMRIDWDTINQLFVDVQPHEIAAAINAHKPLKWGKAGAQVRISSSIIRVEVPDPNAAKKR
PTKTTRNHKEFFERVQQVKALIPDVVIKGYPDCSRAIIKKESSPNAQGQYECQLLVEGYG
LSDCMTTPGIEPYSTKSNHVMEVKTVLGIEAARATIVREIGDVMGNMDIDPRHMQLLADV
MTFKGEVFGITRFGLQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSECIIMGQSV
KLGTGSMQVVRPLYLGAEELKVKKTMFEEGWDAL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgcgcacctcggccaagcagcaggtcgtggaccgcatccccgcgcgcatc
aagcacatccagttcggcatctactccaaccaggacatcgtgaaccaggccgtcctcgaa
gtctccgaccgcaatgtctacgacctccagcccgccgccgacggcacgcgctccctcacg
gccaacgggcccatggacacgcacatgggcatatcgagcaagcagggaaagtgcggaacc
tgcggcgaaggcctggacaagtgcaacggtcactttggccacatcaagcttgcgctgccc
gcattccacgtcggatacctgaagcacatcatcgaggtgctgaactgtatatgcaaagat
tgctcgcgcgtactgctggatgaggtggagcggcggagatacttgcgcagtatgcgccgg
ccagacatggacacgctgcgaaagggcgccgtcaccaagaagatcctcgacgactgcagg
aagaagaagacgtgcccgtactgcggcgctttgcagggtaccgtcagaaaagtacccggc
catccgctcaagatcatccacaaccgatacgatgccttcaaccgatccacggctaagacg
aagaagccaccggcaggcaagatcgagtttgaccagtccttcgatgccgccaaatccgcc
aacccagacctagacaaacacctgaagaaggctgtagacgatatgcatccgctgaggacg
ctcaatcttttcaaaaagatctccccggaggactgcgagctgctagccatgatacccgag
gatgcgcgacctgagatgttgatctgggagtacatgcctgtaccgcccgtggcgctgcgt
ccgtcagtcatgcaggaaggtggcgccaccgaggacgatgtaacgaacaagattggagac
atctgccagattagcagtataatacgcgccggtcttgcgcgaggctttccacttcagatc
ttaatggagcagtgggatttcctgcagctgcagatagccatgtacatcaacagcgacgcg
cctggtctgaaacagcaaggcttgcagaagactatgcgcggtttctctcagcgcctgaag
ggaaagggtggtcgtttccgacaaaatctttccggaaagcgtgtcgacttttctggacgt
actgtcattggacccgatccaaatttgagcattgacgaagtcgctgtcccagagcgcatt
gcgaagaacctcacgtaccccgaaaaggccacacgatacaacatcgacaagctaaggaga
cttgtgaagaacgggtcaaacagatatcccggtgccaactacatcattagcgatcaaggg
ccgaacaaggagcctagcaagacgtcacttatcggtctttcgcggttcgacacaaccggt
gagcgactagagggcgcctcgaagcgactcaagatcggcgacatcgtcgagcgccatatt
gaggatggcgacattgtcctcttcaatcgacaaccgtctctacacaagcttagtattctg
agtcatcgagcgaaagtacgaccatggaggacattccgattgaacgagtgtgtttgcaat
ccgtacaatgccgatttcgacggtgacgagatgaacttgcacgtaccacagaccgaggag
gcgcgaactgaagctacagagctcatgggcgtcaagtacaaccttgcaaccccaaagaac
ggaacaccaattatcgcagctatccaagatttcattactgcagcataccttctaagtaac
aagaacaacttctacgatcgacggacattctgtcagatcgtaaactacatgttcaacgga
gaaggagcttttgatccagatacaggaaagaagcaccctatcgacattccgcctcctgtg
gtatggaagcctcaagcactttggactggaaagcaggttttcaatcttttgatgaagcca
tacaagggctgtagagtgctgatcaacctcgaagctgcatgcaagcagttcaagaacacc
cctgaccaggctcctgatctgaacgagaacgatgcttaccttgttattcgcaattccgaa
gtcatgtgcggtgtcatggacaaggccactgttggtgatggtaagaaggattccgtcttt
tatgtcatgatgcgagatttcggccccgaccacgccgtccaaggcatgaacagattgtcc
aagttatccgcgcgatggctttccaacaacggcttctctcttggtatttccgacgttact
cctggagagaagctcaacaagaagaagcaagaccttgtcgaagaagcctacgccaagtgc
gacaagttgatcaaggatttcaaggagggaaagctgcagcgcgatcccggttgcgatgaa
gagcagacaatggagaacaggataggtggtatcttgtccggtgttcgtcaagcggctggt
gacatttgtttcgaagagctcagcagatggaactcgcccttgctcatggccaagtgtggt
tccaagggatccaacattaacgtttctcaaatggttgcttccgtcggacaacaaatgatt
ggcggtgctcgtgtcgctgatggattccaccatcgaacgctaccccactttcccaaagcc
gctcgtcagcctgcgtccaagggtttcgttagtaacagtttcttctcgggactgacacca
tccgaattcatctttcacgctatgagtggtcgtgaaggtctggtcgatacagctgtcaag
accgccgagactggttacatgagtagacgattgatgaagtcactggaagatctttctgca
caatacgatgacactgtccggaactcgtctggaactgtagtccagttccagtatggagac
gacaacctcgatcccgtggacatggagggcaaggccaaacctgtgcactttgacaggaca
ttctcacatgccgtcacatcgacctgggataactctgaatcgggattgacgcctgaagaa
gtcaaggagtacacagaagcaaggctgaacaccgaacgaaacaagtacccaaggtacaag
ctagacggtgtgacgccgctggagtatcgcgacaggaccgacgctggcatcgaccagaag
gagtctatgcgtgacttcctcgatacggttcaagactacgttttcaagaaggcaaagaag
cttgagactacccttgcttacctcggggtggtacaaccggatggcagaaaggataggaaa
cagtcagcagctgatgcggagaagtacagtcttgccgatggtattgcaaagatttcacat
agcgcactggacgccttcataacactctgtctaactaaataccatcgatcacgagtacag
cccggtcacgctgtcggggctattggtgctcagtctatcggtgaacccggaacgcaaatg
acgctgaagactttccattttgctggtgtcgccggtatgtccatcactcaaggtgtgccc
cgtatcaaggagattatcaacgcctcctccaccatctcaacacctgtcatcgcctgcgac
ctttcgaacaaggtctctgaatctgcggcgcgaatcgtcaaagcgcgtgtcgaaaagacc
taccttcgcgacgtcatttcgtatgttgaagatgtctggcatcctaccggcgcgtacatt
gctatgcgcatcgactgggataccatcaaccagcttttcgtcgacgtccagccccacgag
atcgccgcggcgatcaacgcccacaaacccctcaaatggggtaaagctggcgcccaagtc
cgcatatcctcatccataattcgcgtcgaagtccccgaccccaacgcggccaagaagcgt
cctacaaagacaacacgcaaccacaaagaattcttcgaacgcgtccaacaagtaaaggca
cttatccccgacgtcgtcatcaagggctacccagactgctcccgagccatcatcaaaaag
gaaagcagccccaacgcccaaggtcaatacgaatgtcaactcctcgtagaaggctacggt
ctcagcgactgtatgaccaccccaggtatagaaccttacagcacaaagtccaatcacgtc
atggaagtcaaaaccgtcctcggcatcgaagctgcccgcgcaaccatcgtgcgtgaaatc
ggcgacgtcatgggtaacatggacattgatcctcgtcacatgcagcttttggccgatgtc
atgacgttcaagggtgaagtctttggtatcacgcgtttcggtctgcagaagacgcgtgat
tccgtcttgcagcttgcatcgtttgagaagacgccggatcatctgttcgaggcagccgcg
aggggtaagacggatactatcgatggtgttagtgagtgtatcattatgggtcagagtgtc
aaactcggaactgggtcgatgcaagttgtcagaccattgtatcttggggctgaggagctc
aaggtcaagaagacgatgtttgaagagggttgggatgctttgtga
DBGET
integrated database retrieval system
