Alternaria alternata: CC77DRAFT_981211
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Entry
CC77DRAFT_981211 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_981211
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC77DRAFT_981211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amo1_N
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Nucleoporin_FG
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
29121669
NCBI-ProteinID:
XP_018389697
JGI:
981211
UniProt:
A0A177DXQ7
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MTVCNFYPRNACKFGDACKFEHPGSSRDAARGGGGFGGGSNNNRFGAFSGDRYRPGDNSG
SSSFGGSRESKSSTFNLDKDVIQADLSKERPTYPLSCYGPGKDAPRQLIEGPVEISPEEL
RLRYYTLRAAGNEPTAQQEEGALNEKMQQQVKAILDDVAGAISYVQAGADVHPNRIDIAK
GTASASGSMTNTTASSNTAANPFMKAPSNPFQAAAASSQPSAFGQASTPGFGKPAFGQPS
NPAQTTSAFGQPSNPGQSTSAFGQPSNPGQSTSAFGQASSLGQTTSAFGQTSNPGQATSA
FGQASNPGQSASPFGAASALGQKPSPFGQPSALGGAGSAFGKPAFGASGFGQPSMPGAGS
AFGQTSSMGQGSAFGQPSAPGAASGFGQTNALGQKPNPFSKPGFGQSGFGQASQPGANTS
PFGQQASSGASPFGQQASSGQSPFGQQAQQTNQPSPFGQQAQKPNPFGQPQQASTQAPAQ
SNPFGGTASSQTPAFGQTSKPSPFGTQQPQNNATQPAAANPFLKPQTSAAPATSTPSPSP
FATQPQNQPNNPPAPAQATSQLPSIAQPTSAARPHVEGVTPDGKPIDPKDRYKEGKPEEY
DGEQGRILEEIYKRVSQLGRFNDDEDIPVTPPKCEWIAPLAIL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctgcaacttctatccgcggaacgcttgcaaattcggagatgcttgcaaattc
gagcaccctggaagttcgcgggatgcagcccgagggggaggtggttttggcggaggctcc
aacaacaaccgctttggtgctttcagtggcgatcgctaccgtccgggtgacaatagcggg
tccagctcattcgggggtagccgcgaatcaaagtcgtcgactttcaacctagacaaggac
gtcattcaagccgatctcagtaaggagcgtccaacgtacccgctctcatgttatggccca
gggaaagatgctccacgacagcttattgaagggcctgtcgaaatcagtcccgaagagctc
cgccttcgatactatacgctacgagcggccggtaacgagcccacagcacaacaagaagag
ggtgcgctgaacgagaagatgcaacagcaagtaaaagcgatcttggacgacgtcgcaggg
gctatcagctatgttcaggcaggtgccgacgtccatcccaatcgcatcgacatcgccaag
ggcactgcttcagcaagcggatcgatgactaacacgactgcgtcatctaacactgccgcg
aatccttttatgaaagctccgtcaaacccgtttcaggcggcagcagcatcttcgcagcct
tctgcgttcggacaggcctcaacaccaggatttggaaagccggccttcggtcagccatcc
aacccagcacaaactacctccgcatttggacagccatcaaatccgggtcagagtacctca
gcattcggtcaaccctcaaatccgggtcaatccacctcagcgtttggacaggcgtcgagc
ctgggtcagactacttcggcttttggacagacctcaaatccaggtcaggctacttcagca
tttggacaggcgtcaaatccaggccagtcagcttcgccctttggcgcggcttctgctttg
ggtcaaaagccatcaccctttggtcagccttcagcgcttggcggtgctggtagtgcgttc
ggaaagcctgcatttggagcctccgggtttggtcagccgtcgatgccgggcgcaggaagc
gcattcgggcagaccagcagtatgggccaaggctcggcctttggccagccatcggcgcca
ggtgcggcgtctggatttggacagacaaacgctctagggcaaaagccaaacccattcagc
aaacctggattcggtcaaagtggattcggtcaagcgtctcagccaggtgccaatacctcg
cctttcgggcaacaagcatcgtctggcgcatcgccgtttggtcagcaagcttcgtcaggt
caatctcctttcggtcagcaagcgcagcagacaaatcagccttcaccgtttggtcaacaa
gcacagaagccaaacccatttggtcagccacagcaagcatcaacacaggcacctgcgcaa
tcgaacccctttggtggaactgcatcatcgcagactccagcattcggccagacgagcaag
ccctcacctttcggcacccaacagccgcaaaacaacgcgacgcagccagcagctgctaat
cctttccttaaaccccagacatccgccgctccagcaacttccacaccttctccctctcct
tttgcaactcaaccacagaatcaacctaacaatccccccgctcctgctcaagctacctct
cagctgccttcaattgcacagcctacctcggcagcacgtccccatgttgagggcgtcaca
ccagatggcaagccaatcgacccgaaggaccgttacaaagagggcaaaccagaggagtat
gatggcgagcagggtaggattttggaggagatttataagcgcgtgtcgcaactaggacga
tttaacgatgatgaggacatcccagtcacgcctccgaagtgtgaatggatagcgccgctt
gcgatattgtga
DBGET
integrated database retrieval system
