Alternaria alternata: CC77DRAFT_987231
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Entry
CC77DRAFT_987231 CDS
T05291
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
aalt
Alternaria alternata
Pathway
aalt03030
DNA replication
aalt03410
Base excision repair
aalt03420
Nucleotide excision repair
aalt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CC77DRAFT_987231
03410 Base excision repair
CC77DRAFT_987231
03420 Nucleotide excision repair
CC77DRAFT_987231
03430 Mismatch repair
CC77DRAFT_987231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalt03032
]
CC77DRAFT_987231
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_987231
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_987231
DNA replication proteins [BR:
aalt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CC77DRAFT_987231
DNA Replication Termination Factors
ELG1-RFC complex
CC77DRAFT_987231
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CC77DRAFT_987231
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CC77DRAFT_987231
Check point factors
HRAD17(Rad24)-RFC complex
CC77DRAFT_987231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_11
AAA_16
Mg_chelatase
AAA_assoc_2
SLFN-g3_helicase
AAA_19
AAA_28
AAA_7
DUF815
AAA_5
AAA_24
bpMoxR
AAA_14
AAA_30
ResIII
RNA_helicase
AAA_3
ATPase_2
AAA_2
Motif
Other DBs
NCBI-GeneID:
29121833
NCBI-ProteinID:
XP_018387135
JGI:
987231
UniProt:
A0A177DP37
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADFFNIKARQANAAKASSSKAPTTKQEPNRMQPWVEKYRPKTLSEVTAQDNTIQILSRT
MQSSNLPHMLFYGPPGTGKTSTILALAKELYGPELMKSRVLELNASDERGISIVRQKVKD
FARQQLSVAPNHTVMVEDKDGSEGGKTVRYRDKYPCPPFKIIVLDEADSMTQDAQSALRR
TMETYSRMTRFCLVCNYVTRIIDPLASRCSKFRFKSLDQGNAVKRVGDIARLEKVELEDG
VAEELVRVADGDLRKAITFLQSAARLVGAVVAANGHNAGAGGGKKKKEKEKKVVADEDEM
DIDGATLVPPPAVSLPIIAEIAGVLPPDTLSSFSDSLFPRSSANKVVRYAEIAKVVENMI
AEGWSASQTVGQLYEQIMFDERVEDVKKVRLAGVFSETDKRLVDGGDEHLAVLDLGVRVA
GVLCL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcttcaacataaaagcgcggcaagccaatgctgccaaggctagctcatcg
aaagcgcccacaacgaagcaagagcccaaccgcatgcagccatgggttgagaaataccgc
cccaaaactctctccgaagtcactgcccaagataataccatccaaatcctgtcccgcaca
atgcaatcctccaacctcccacacatgctcttctacgggcccccaggaaccgggaaaacc
tccaccatcctcgcccttgccaaggaactctacggccccgaactcatgaaatcacgtgtc
ctcgaactaaacgcctcggacgaacgtggcatcagcatcgtgcggcagaaagtgaaagat
ttcgcgagacagcagttgagtgttgcgccgaaccacaccgtcatggtcgaggataaagac
ggtagtgaggggggcaaaacggtgcggtatagagacaaatatccctgtccgccgttcaaa
atcatcgtgttggatgaggcggatagtatgacgcaagatgcgcagtctgcgctgcgtagg
accatggaaacatactcacgtatgacgcgcttctgccttgtgtgtaactacgtaacccgc
atcatcgaccccctcgcgtcccgttgttccaaatttcgcttcaagagcttagaccaagga
aacgctgtgaagcgtgtaggcgacattgcgagactcgagaaggtggagttggaagacggt
gttgcagaagagttagtgcgcgtcgcagatggggatttgagaaaggcaatcacattcttg
cagtctgcggctagacttgttggcgctgttgttgcagcaaacggccataatgctggggcg
ggaggaggaaagaagaagaaggagaaggagaagaaggttgtcgcagacgaggatgaaatg
gacattgatggagcaacactagtacccccaccagcagtctcccttcccatcatcgctgag
atcgcgggtgtattacctcccgacacactatcctccttcagcgacagccttttccccaga
tcttcagcgaacaaagtcgtgcggtatgcggagattgccaaagtcgtggagaacatgatt
gcggaggggtggagcgcgagtcagaccgtgggccaattgtacgaacagatcatgtttgat
gagagagtcgaggacgtgaagaaggttagactcgccggcgtgtttagtgagacggataag
aggcttgtggatggtggggatgaacatcttgctgtgctggacttgggggttagggttgct
ggggtgctttgtctctga
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