Alternaria alternata: CC77DRAFT_989318
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Entry
CC77DRAFT_989318 CDS
T05291
Name
(RefSeq) endoribonuclease dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_989318
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CC77DRAFT_989318
microRNA pathway
RISC loading complex
CC77DRAFT_989318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
DSRM_2
Dicer_dimer
Ribonucleas_3_3
Helicase_C
ResIII
DEAD
Dicer_platform
Motif
Other DBs
NCBI-GeneID:
29121882
NCBI-ProteinID:
XP_018385438
JGI:
989318
UniProt:
A0A177DKW9
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MVDATSQSWVTIEEQQEDYFSFEETLASSDSEDEDNKSNEARRQDKDEDSDVDADIAHAH
GPNTTSERRRAQNEILRAFAANISSRLTQKEVDDAAAKTANEEQLSIRDILAKQDGTARI
TNPRDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVLDGELEYRAAGGIPKIAFFL
VDSVNLVFQQANVLRCGLDQSVEGICGAMGASLWSKSTWESHFQSNMVIVCTAEVLVQCM
MHSFITMAQINLLIFDEAHHAKGNHPYARLMKDYYVHEPKLSNRPRIFGMTASPIDTRGL
SIDHIRNVANDLEKLLHSKIVTTSESVLASNSISRPIEEIAVYERLQDECETPLHQKIKA
KFGDISAFKKLFIASKHHGSELGRWASDMYWSFAFTDEQSRKLEDREHLKHNKIKQDGAA
QEWDAQSKRLQEAATFVQQFDFGSCALSDEDLSSKVLKLRHWLNLYYERDDGARCIVFVT
QRQTARLLELIFSQIGGPNLRCSVLVGVNNRVGEHNISLRNQILTVAKFRRGELNCLFAT
SVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRGRARHRNSRYLHMVEAGNEDHQSRVLDVK
SDEDTMRRYCKALPQDRQIGGNDVDLLSFEDKMYPSFVTKASAKLTYRSSLSVLNHFVAT
LPGPDRQTMLQPTYVVSPEVNYDALDPQRRGFVCEVMLPEHSPVISVTGDIQSKKATAKC
SAAFKACLKLYNKGYLSENLLPTTHKSLPAGTNALLALSEKKKGMYSMLIKPEFWKIGRG
VAPTCLYLTLIDLDAGLDRPHQPMGLLTRNPLPQMPNFPIYLTDCRPSNVISQSSQTPLY
VSAETIDILTGFTLRIYEDVYNKKYENDAKKMSYWVVPILPGKMSSPLSVTALDQILDME
QVHRVYNEPMWRWTPKTISKDLLDRYFVDPMNGGRRYYSNHLATQLKPQDPVPKRLPRSG
HKFMDSILDYSDSKWAKSRDISRWNQSQPVLEVEKIPFRRNHLARVEEKEKGELDDLKTY
ICPEPLHVSNLATPFVVVCYVLPAIIHRFESYLIALDACKTLDLDISPALALEALTKDSD
NSEEHGEEKINFKSGMGPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLC
NKNLMETAVGKKKVISADGTELDIQLYGYIRTDSFSRRTWYPEGLKLLKGKGLNKTEDDW
LKLTHNLGDKSIADVCEAFIGAAFQQHHKAGRWNPRDWDEAVKAVKLFANSRDHLMSKWS
DYYDAYQKPKYQIADATAAMLETARKIELKHPYHFKYPRLLRSAFAHPSYPYMYENIPNY
QRLEFLGDSLLDMAFIMHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHVHIKQN
TAILSSQIRQYVLEAEEAEREAGGAVDYWVTISEPPKCLADVIEAYTAAIFVDAEFDFSV
VQDFFDMHLKPFFEDMTLGTYENFASNHPTTRLSRLLSIAFGCSEWRMAAMETDTLIPGK
GKAIAAMIMIHGKVVFHTLGQSGRYARVRASHTALEKLDGLPPYEFRKRYGCDCVYEGEG
EGEQDESVLKAKAERMKEAIGLSI
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgccacaagccaatcgtgggtgacaatcgaagagcaacaagaagactacttc
tcgttcgaggagacattggcgtcttccgattctgaagacgaagacaataaatccaacgag
gcaaggcgtcaagataaggatgaagactctgatgtagacgctgacattgcgcatgcgcat
ggcccaaacacaacatcagagaggcgcagagcgcagaacgagatcttgagagcctttgct
gctaacatcagttcgcgcttaacgcagaaggaagtcgacgatgctgccgcaaagactgcc
aacgaagagcagctttcgatccgcgatatcctggcaaaacaagatggcaccgctcgcatc
acgaacccacgcgactaccaaaccgaactgttccagagagccaagagcgagaacgtgata
gcagtgctggacacgggctccggcaagacccacatcgcaactctactcctgcgacatgtc
ctagatggcgagcttgaatatcgggctgcaggcggcatccccaagattgcgttctttctg
gtagactcagtcaacctcgtcttccaacaagcaaatgtcttgcggtgcggtctagaccag
agtgtagagggtatatgtggcgctatgggtgcatcgctatggtcgaaatcgacctgggag
agtcactttcagagtaacatggtgatagtatgtaccgccgaggttctcgtgcagtgtatg
atgcactccttcatcaccatggcccagatcaatctcctcatctttgacgaggcccatcat
gcaaaaggcaaccacccctacgcccgtctgatgaaggactactacgttcatgaaccgaag
ctttctaatcggcctcgtatctttgggatgacagcttctccgatcgatacacgagggtta
tcgatcgatcacatcagaaacgtcgcgaatgaccttgagaaactactccattccaagata
gtcactacgtctgagagtgttctcgcttcgaacagtatcagcagacccatcgaggagata
gcggtatatgaacggctgcaggacgagtgtgagacgcccctccatcaaaagataaaagcc
aagtttggagatatatcggcgttcaagaaattgttcatcgcatccaagcaccacggctcc
gaactaggtcgttgggcttccgacatgtattggtctttcgctttcactgatgagcagagt
cgcaagctcgaggatcgtgagcaccttaagcacaacaagattaagcaagatggagccgcg
caggagtgggacgctcagtccaaacgcttacaggaggcggccacatttgtacaacagttc
gacttcggttcgtgcgcccttagcgacgaagatctgagttcaaaggttcttaagcttcgt
cattggctcaatctttactatgagcgcgatgatggagctcgttgcatcgtcttcgtcacg
cagcgacagaccgctcgcctgcttgagctcatcttctcccagatcggcggaccaaacctc
cgttgcagcgttcttgtcggggtcaataatcgtgtaggcgagcacaatatctccttacgg
aaccagattctgacagtcgccaaatttcgtcgcggtgaactgaactgcctgtttgccaca
tccgtagcagaggagggactcgatattccacaatgcaaccttgtggtacggttcgatctc
taccgcaccatgatagcatacgtgcagtctcgcggtcgggcaaggcatcgtaattccagg
tacctccatatggtcgaggctggcaacgaagatcatcaaagccgggtccttgatgtcaag
agcgacgaagacacaatgcgaaggtattgcaaagctcttccccaggatcgtcaaatcggc
ggaaatgacgttgacttgctatcgttcgaagacaagatgtacccaagttttgtcacaaag
gctagtgcaaagctcacttaccgctcaagcttatctgttctcaatcacttcgtagctacg
ctgcctggacctgacagacaaacaatgcttcaacccacctacgttgtcagtcctgaagtt
aattacgatgccctggatccgcagcggagaggttttgtttgcgaggtaatgctaccggag
cactcacctgtgatttcagtcactggtgacatccagagcaagaaagcaactgcaaagtgc
tccgccgcattcaaggcatgtctcaagttgtacaacaaaggctatctcagtgaaaatcta
ctccctacgacccataagagcttaccagccggaacaaatgcattgctggcactcagtgag
aagaagaaaggcatgtactccatgttgatcaagccagagttctggaagatcggacgtggc
gttgcccctacgtgtctttatctcaccctcatcgaccttgatgcgggtttggatcgacct
catcaacccatggggctcctcactcgcaatcccctcccgcaaatgccaaatttccccatc
tatcttactgattgcaggccctctaatgtcatctcccagtcctctcaaactccgctatat
gtgtcagcagagacgatagacatcctcactggttttactttgcgcatatatgaggacgtc
tacaacaagaaatatgagaatgatgctaagaagatgtcctattgggttgtgccgatacta
cctggcaagatgtcttctccgctatccgttaccgccctcgatcagattctggatatggaa
caagttcacagagtctacaacgagcctatgtggagatggacaccaaagactatttctaag
gacctattagaccggtacttcgtggaccctatgaatggaggccgacgctactactcaaac
cacctcgccacacagctcaagccacaagatccggttcccaaacgtctacctcgtagcggg
cacaaattcatggacagcatcttggactatagtgacagcaaatgggcaaagagtagggat
atctcaaggtggaaccaatcacagcctgttcttgaggtcgaaaagatccctttccgtcgc
aatcacctcgcacgtgtcgaagagaaagagaaaggcgagctcgacgacctcaagacatac
atttgtcccgagcccctacatgtctctaatctcgcaacaccattcgtagtcgtgtgctac
gtcctaccagctatcattcatcgattcgagagctacctcattgctttagacgcctgcaaa
actctggatctcgatatcagcccagcgcttgccttggaagccctgaccaaagactctgac
aattccgaagagcatggcgaggaaaagatcaacttcaagagcgggatgggcccgaactat
gagcgtctcgaatttctaggagattgtttcctcaagatggctacgtccctctcggtattt
gtacagcagccagacgagaacgagtttgaatttcacgtccgccgtatggaaatgctttgc
aacaagaatctgatggagactgcagtgggtaagaagaaagtaatttctgcagacggaact
gagctggacatccagctttacgggtacattcgcaccgactctttctcacggcgcacatgg
tatcctgaagggctcaaacttctcaagggtaaaggactgaacaagaccgaagacgactgg
ctcaaactcacgcacaatctcggggataagagtatagcggatgtttgtgaggcctttatt
ggtgctgctttccaacagcatcacaaggccggacggtggaaccccagggactgggatgaa
gccgtcaaagctgtcaagctgtttgccaacagtcgggatcatctgatgtcaaagtggtcg
gactactatgacgcgtaccagaagccaaagtatcagatcgcggacgccaccgcggcaatg
ctcgaaactgctcgcaagattgaactgaagcacccgtaccacttcaagtatcctcgctta
ctccgatcggccttcgctcatccatcgtacccatacatgtatgagaacataccaaactat
cagcgtctggaattcctaggtgactctctcctcgacatggctttcatcatgcatctctac
tacaaatatccggacaaggacccccagtggctcactgagcacaagacgcccatggtgtcc
aacaagttcttaggcgccgtgtgtgtcaagctgggctggcatgttcatatcaaacagaat
actgctatcctgagctcccagatccgccagtacgtcttggaggccgaggaagcagagagg
gaagcaggtggtgctgtcgactattgggtaaccatcagcgaaccacccaagtgtctggct
gatgtaatcgaggcatatactgcagccatcttcgtagatgcggagtttgacttcagcgtc
gtacaggatttcttcgacatgcatctcaagcccttcttcgaggacatgacgctcgggacc
tatgagaacttcgcttccaaccatccaaccacgcgtctcagtcgcctcctttccatcgcc
tttggctgcagcgagtggcgcatggccgccatggagacggacacgctcatccctggtaaa
ggcaaggccatcgctgctatgatcatgatccacgggaaggtcgtcttccataccttgggc
cagagcgggcgatatgcacgtgtcagggcgagccatacagcattggagaagttggatggg
cttccaccgtatgagttccggaagaggtatggttgtgattgcgtgtacgagggagagggt
gagggcgagcaggatgaatcagtattgaaggcgaaggcagagcggatgaaggaagctata
ggtctgagtatttaa
DBGET
integrated database retrieval system
