Alternaria alternata: CC77DRAFT_990433 Help Entry CC77DRAFT_990433  CDS       T05291                                  Name (RefSeq) hypothetical protein   KO K12879   THO complex subunit 2 Organism aalt  Alternaria alternata Pathway aalt03013   Nucleocytoplasmic transport aalt03040   Spliceosome Brite KEGG Orthology (KO) [BR:aalt00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CC77DRAFT_990433   09122 Translation    03013 Nucleocytoplasmic transport     CC77DRAFT_990433  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aalt03019]     CC77DRAFT_990433    03041 Spliceosome [BR:aalt03041]     CC77DRAFT_990433 Messenger RNA biogenesis [BR:aalt03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      CC77DRAFT_990433 Spliceosome [BR:aalt03041]  Complex C   Other components    EJC/TREX     CC77DRAFT_990433  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     CC77DRAFT_990433 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  THOC2_N Tho2 Thoc2 Motif Other DBs NCBI-GeneID:  29121909 NCBI-ProteinID:  XP_018385044 JGI:  990433 UniProt:  A0A177DIN3 LinkDB All DBs Position Unknown AA seq 2323 aa AA seqDB search MPPPPKRKRPERTYSQDDDRSGRPSPHRPQNLGFAHHQQQQANSPRGGGGGGGGGGGRRQ SRNNGRGGSSVPQSPNNASSHASPTAMSPPANTFPLTRPSQATPTTPAPAPAPSQPSTPS TPREVPESNEYLTPDRVARWNGEARDAVVKAAMAAQGTGDVLTLSVIFHEIIEASMDQLL DAGELGSIVRDITSAPADEHVDSVSTFLDTLSSLTQDEGKQALVRQMLVATDIDVSRMRA ELENDLLKSLGLVRDSFSKMAVRKATHALYRQSNYNLLREETEGYSKLMTEYFTTVNSEP PSQEVVGETWQRVNALIGAFDLDIGRVLDVTLDVFANLLVKHGRFFVKMLRSSAWWPELR GFDNIKWEEPEVPTLPLWARPDAKQWYYTDEEKDEQLRLRESRDCKFWQRVGELGDRAGI QAFFELGGRRITANNRQPDQTLPAEGAPLSKQQAARKWADEWMEQTKTLPPSGNDIAAQL LGFKLQFYASDVRDATDELPDNLMYLIALLIKIGFISILDLYPHLYPLEPDMGAHKERLL KAKKEKEESERGAVVNALTMAGALPDETPGPPAVSRLRDADSRSKSDTGRSTPAKSDEPA DKKKALPEPKDQKFTLLKSLLCIGALPEALFILGRHPWFLDVYPELLDLIFRLAHHSLTK VYEESKPTSVEKSVIATKGSNNRGIMRPSDYVPRRTLRWAKPDRKDQDGGTDYKFYWEDW VDNVPVCQEVDDVIKLCTSLLGLVGPECGKDSVLLTKIIRIGKKNLADDPSESNRKRWVN FSATFIAPAITFTGRNPGVINEAWDLFKHFDTATRYTIYQQWFNGMLKPVIKTAFKEVET ETRKTLSRISATNTKEYGRKIAKISYASPGIVFRTTVKQLVNYPNMITALVECSRYLTLL GYDVLTWTLVTYLLNPDKGSQQDDGMLSAPWLKNIATFVGKAYARYHLMDPVPVLQLTTH QLLTAEGELYMLDVLEQIVKSMGGISVSGSVSESVTLALCAGPALRTFTLQYRLADNRTH AASSARRLVRCLKETGLGPQILIALAQHVEAYVHRDDQLEVPDKPVLFNVDKLRSVMLQY LELLRTFLSVDDFDALFPPLVEMIADYHVEPDVAFTIARAGITAKANAFRAEQRSKLLSD TQTNGDVVMSGVEESQAVNEAQDDATSAETSKAKEDVEMKDSVAAEGDSASVTAARSDKP FLPDVPNSEVEILANQLKEQLPETFGNHPCVSYYVAFWQLSLTDVVVDVDGINQQYKDSI ETLERQLPAPVPERRGYRPNVPKADSESVKALKENIARIKDEQQVVTKNHAVTQESLKVE LRRWFEGVPMMGPQCDVLHNALLQDCFIPRSRISQEDAQYAFSMLIFMHSSGVPGFRMSR LLDMLFNANRLTSIISMYTEAESSSFGRFLGGIMRELQVWQENKDDAFVKNAHGLEKNLP GFGRSYDGDRNATSFFTYDQFCMVLFKWHKALAAALKTCLESGNYMQMRNSINVLHALGT NFPKVTSMGTELKEMVVRLKEGEERQDLMRSLESVLGPILKGEKFWQEDHVFRNVPAPTP APGSTTNGSDKAATEKGKTPQPQDAKLDAAAPAFKPKSETNGTPVRESNENRSKHNSATP APSSRDKPTPRTSDSRPSTPSQQDTGSGRPTPKPGPPMHHSSVPLRPDNRNTPGQNTPVG RPPHALPTRPDPQPRNRSERPIIDRTPESAHGRYDNRGPPGDYGRLDRSVDAGRLREASP GRRARPLPGGRTPERVPSAAEHREWSGRERDYDDRAMRGPPRDSRAPAVRPPTWDPHNPR DMRDQRERSDPRGHATPTAMESRRMPSTSSLANEYRRDGPPANAPYAAEQNDRPSRLPAV PIPAKEEPTVNPARAALINQAEHAGGRHMPPRSDRDNRSERDSRMNSPRHGDDRRGDDRR VEERPPAGYHGRNDLPRDVRDERPQMPPSGGRDRRDDPGASAPTGPRGGRNEAAAASRAS REMFQPTPGPRAQDPNYGRLNQPSEPAPPSGPRSDRPHAPSQPSTPNAPTGPAASLPAGI HPSRLVNIEGRAPSGPPLQTNVPNAPSGPRGNNRGPQGPVPSSPVGPRPPTGPGGPRNAG NPLRAINNVLTGNAPGDRSNERGAPPSNPPVRGRGATRANGPIEGSGGMTSPMPPPALDS TPNRMENQHPRSSRNDDVASRMEGAPPEEGRSESRSHRHRSGRERSPDRSDRPREERSSR NPPSDRPEGERGSDRDRGGREKRGGDRGSSHRERERDGESRSGREPRESSRRERGSRDDG RASGRDERDRRSRGGGGSGGTDDGRKRGRDPQDQGHGETKRRR NT seq 6972 nt NT seq  +upstreamnt  +downstreamnt atgcctcctccccccaagcgcaagcgacccgagcgcacttactcacaggacgacgaccgc agtggacgcccgtcgccgcaccgcccccagaacctcggattcgcgcatcaccagcagcag caggccaacagcccgcgcggaggcggcggcggcggcggcggcggaggtggcaggcggcag agcagaaacaacggacgcggtggctccagcgttccccaaagccctaacaacgcctcatca cacgcatcgccgaccgccatgtctccgcctgcgaacaccttcccgttgactcggccgtct caagccacaccgaccaccccggccccagcgccggctccctcacaaccttcgacgccttcc acaccgcgcgaggtccccgagagcaatgagtatctgacgccagaccgcgtcgctcgctgg aatggcgaagcacgcgacgctgtggtcaaggccgccatggctgctcaaggcacaggcgac gtcctcaccctctcggtcatatttcacgagatcatcgaggcgtccatggaccagctgcta gatgccggcgagttgggctcaatagtacgcgacatcacatctgccccggccgacgagcac gtcgactcagtatcgacgttcctcgacacgctaagttcgctcacacaagatgaaggcaaa caggcgctcgtgcgacaaatgcttgtcgcgacagacatcgacgtgtcgcgcatgcgagcc gaactagaaaacgacctcttgaagtccttgggccttgttcgcgatagtttctcaaaaatg gcagttcgcaaagcaactcacgccctgtaccgacagtccaactacaacctgctgcgcgaa gagaccgagggctactccaagctcatgaccgagtacttcaccaccgtaaacagcgaaccg ccctcacaggaagtcgtcggcgagacctggcaacgagtaaacgctctcattggcgcattc gacctggacattggcagagttcttgatgtgacgctggatgtgtttgccaacctcctagtc aagcatggaaggttctttgttaagatgctaaggtcgagcgcatggtggcccgagctacgt ggtttcgataacatcaagtgggaagagcccgaagtaccgacattgcccttatgggcgcga cctgatgcgaagcagtggtattacaccgatgaggagaaggacgaacagctgcgcctgcga gagtcgcgcgactgcaaattctggcagcgagtgggtgagttgggcgaccgggcaggcatt caggccttctttgaacttggaggccgtcgcatcactgcgaacaaccgacaacccgaccag accttacctgccgaaggcgcgccattatcgaagcaacaggcagctcggaaatgggccgac gagtggatggagcagaccaagacactccctccgtcaggaaacgacatcgccgcccaactg cttggcttcaagctccaattctacgcgtcagatgtccgcgatgccaccgacgaacttcct gacaatctcatgtacctgattgcgctcctgatcaagattggcttcatctctattctggat ctttatcctcatctatatccactagagccagacatgggtgcacacaaagaaaggctcctc aaggccaagaaagagaaggaggaaagcgaacgaggcgcagttgtcaacgctctgactatg gccggtgcactgcccgacgagactcctggcccgccagctgtttcccgcctccgagacgcc gactccagatccaaatccgacactggacggagcacgcctgccaagtctgatgagcccgcg gacaagaagaaagctttacccgagcccaaggaccagaagttcacgcttttgaagagtctg ttgtgcatcggcgcgcttccagaagctctgttcatactcgggcgacatccttggtttctg gacgtttaccccgagctattggacctcatcttccgcctggcacatcactctttgaccaag gtttacgaggaatccaaaccgacctcagttgaaaagtccgtcattgccaccaagggtagt aataatcggggcatcatgcggcctagcgattatgtccctcgacgaactctccgatgggcc aaaccggaccggaaagaccaagatggaggaaccgactacaagttctattgggaagactgg gttgacaacgtccccgtgtgtcaagaggtggatgatgtcatcaagctttgcaccagtctc ctaggcttggtgggaccagagtgtggaaaggatagcgttctcctaaccaagatcatacgt atcggcaagaagaacctggccgacgatccttccgagtcgaatcgcaagcgatgggtcaac ttctcagcaactttcattgcacctgcgattactttcacaggcagaaatccaggagtcatc aacgaggcatgggatctgttcaaacatttcgacacagccacacgatacaccatttaccaa cagtggttcaacggaatgctcaagccggtgatcaagacagctttcaaagaagtcgaaact gaaaccaggaagactctaagtcgtatctctgcaaccaacaccaaagaatatggtcgcaaa atcgccaagatctcgtatgctagcccaggcatcgtcttccgaacaacagtcaagcaattg gtcaactacccaaacatgatcactgccttagtcgaatgcagtcgatatcttactttgctt gggtatgacgtcctgacctggacgctggttacataccttctcaaccccgacaaaggatca cagcaggatgacggtatgttgtctgcgccgtggttaaagaacattgctacctttgtcggc aaagcttacgcaagatatcacttgatggatcctgttcccgttctacagctcaccacacac cagctcttgactgctgaaggcgagctatacatgttggatgttcttgaacaaatagtgaag tccatgggtggcattagcgtcagtggatctgtgtcagagtcagtgactctggcgctttgc gcaggacctgcccttcgtacgttcactttacagtatcgtctagcggataaccgtacccac gctgcttcttcagcaagacgtctagtcaggtgtctgaaggagacgggactcgggccacaa atcctcatcgcattggcgcagcacgtggaagcttatgttcaccgcgacgaccagctggaa gtacccgacaagcctgtacttttcaacgtcgacaaattgcgctccgtcatgcttcaatac ctggagcttctccgtacattcctctctgtggacgactttgacgctctgttccctccgctg gtagagatgattgcggattaccacgtcgagccggacgttgctttcacgattgctcgtgcg ggcataacagccaaggccaatgctttccgagctgaacaacgctcgaagctactttccgat acacagacgaacggcgatgttgtcatgagcggcgttgaagagtcacaagctgtgaatgaa gctcaagatgatgccacatccgctgagacctcgaaagcgaaagaagacgtggagatgaaa gattctgttgctgcagaaggagactcggcatccgtgactgcagctcgttcggacaagcct ttcttgcccgatgtgccaaattcagaggttgaaatcctcgcgaaccaactgaaggagcag ctaccggagaccttcggcaaccatccttgtgtgtcctactatgtcgcattctggcagttg tccctgacagacgttgtcgtcgacgtcgatggcatcaatcaacaatacaaggattcaatc gagaccttggagcgacaactgcctgctcctgtgcccgagcgccgtgggtaccgacctaac gtacccaaagctgattcagaatctgtcaaggctcttaaggagaacatagccaggatcaag gacgaacaacaggttgtcacgaagaaccatgctgtgacacaagagagtttgaaggtcgaa ttgcgtcgatggttcgagggcgttccaatgatgggaccacagtgcgacgtcttgcacaac gctctgctccaagactgctttatccctcgcagtcgcatatctcaagaagacgcccaatat gcgttctctatgctcatattcatgcacagctcgggtgtgccagggttccgcatgagtcga ctactggatatgctcttcaacgcaaataggcttacatctattatcagtatgtacactgaa gcagagtcctcatctttcgggaggttcctcggtggtatcatgcgtgagctacaagtctgg caggagaacaaggatgatgcttttgtcaagaacgcccatggtttggaaaagaatcttcct ggctttggcaggagctacgacggggaccgcaacgcgacaagcttcttcacttacgatcag ttttgcatggtgttgttcaagtggcacaaggcacttgcagctgcgcttaagacatgcctg gagagcggcaactacatgcaaatgcgtaactcgatcaacgtccttcacgcgctgggtacc aacttccctaaagtcacgagcatgggcacagagctgaaggagatggtggtgcgcctgaag gagggagaggagagacaagatcttatgagatcgttggagtctgttcttgggcctatcctc aaaggagagaagttctggcaagaagaccatgttttccgcaacgtaccggcacctactcct gcgccaggaagcacgacgaacggaagcgacaaagctgctacggagaagggtaagactcca cagccacaagatgcgaaactcgacgcggctgcacctgctttcaagccgaagtccgaaacg aacggtacgccagtacgagaatcgaatgaaaataggtcaaagcataatagtgcaactccc gcgccttcctcgagggacaagccgacgccaagaacatccgacagcaggccttctacccca tcgcaacaagacaccggctccggcagacctacaccgaagccaggtcctccgatgcatcat tcctctgttccactgcgaccagacaacaggaatacaccagggcagaatacccccgttggc agaccaccgcacgcattaccaacgcgaccagatccacaaccgaggaatcgatcagaacgt cctatcattgatcgcacgcccgaaagtgcgcatggtagatatgacaatcgaggtccccct ggagactatggccgactagatcgctcggtagatgccggacgtctgcgtgaggcttcgcct ggtcggcgcgcacgacctctgcctggcggcagaactccagaaagggtaccttcagccgcc gagcatcgcgaatggtctggcagagaacgtgattatgatgatcgggctatgcgaggaccc ccacgagattcgcgagcgccagcagtacggccacctacttgggatccacacaatcctaga gatatgagagatcaacgtgagcgttctgatcctcgaggtcatgctacacctacagcgatg gagtctcgccggatgccctctacttcctcgttagccaatgaataccggcgagatggtcca ccagccaacgccccgtatgctgcagagcaaaacgataggccatcacgactgccagcagtg ccgatcccggccaaggaagagcccacagtcaaccccgcgcgtgctgccttgatcaatcaa gcagagcatgcaggtggcagacacatgccaccgaggtctgatcgtgacaaccgtagcgag cgagactctcgtatgaactctccacgtcatggcgatgataggcgtggtgacgatcgtcga gtcgaagagcgcccgcctgctgggtatcatggacgaaacgacctgccccgagacgttcgg gatgagcgtcctcagatgccaccctctggtggccgcgaccgtcgggacgatccaggagct agtgccccaactggtcctcgtggcgggcgcaatgaagccgctgcagcgtctcgtgcatca cgagagatgttccagcctacacctggaccacgcgcgcaggaccccaactatggaagactg aaccagccttcggagccggcaccaccatcaggcccacgcagtgacagaccacatgcgccg tcgcagccttccacaccgaatgcacccaccggtcccgcagcgtcactaccagcaggtatt catcctagtaggctcgttaacatcgagggtagagcaccaagcgggccaccgcttcagact aatgtaccgaacgctccaagcggcccgcgtggtaacaaccgcggtccccaaggacccgtc ccatcatcaccagttggtccgcgacctccaaccggtcccggaggacccaggaatgctggt aaccctctccgtgccattaataacgtattgactggaaatgcgcccggcgatcggtcaaac gaacgcggtgcacctccttctaatcctcctgtgcgaggtcgtggcgctacacgcgccaat ggcccaatagaaggatccggtggtatgacaagcccgatgccaccgccggcgcttgattct acacccaaccgtatggagaatcagcatccgagaagcagcaggaacgatgatgtagcaagc aggatggagggtgctccaccagaagaaggccgctcagagtcacgcagccatcgacaccga tcaggacgcgagcgttcacccgatcgatccgaccgaccccgcgaagaaaggagcagccgc aaccctccttccgaccgcccagagggtgagcggggctccgaccgagaccgcggtggtcgt gaaaaacgaggtggcgacaggggaagcagtcatcgagagcgcgaacgagacggtgaatca aggtcaggacgggagccccgtgaaagcagcagacgcgagcgtggttctcgtgatgatgga cgagcttcaggaagggacgaacgcgatagaaggagccgtggtggcggaggcagtggagga acagacgatggccgcaagagaggtcgcgatccccaggatcaaggccatggagaaacgaag aggaggcgttag

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