Alternaria alternata: CC77DRAFT_996223
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Entry
CC77DRAFT_996223 CDS
T05291
Name
(RefSeq) SNF5-domain-containing protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
aalt
Alternaria alternata
Pathway
aalt03082
ATP-dependent chromatin remodeling
aalt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CC77DRAFT_996223
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CC77DRAFT_996223
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aalt01009
]
CC77DRAFT_996223
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_996223
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_996223
Protein phosphatases and associated proteins [BR:
aalt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CC77DRAFT_996223
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CC77DRAFT_996223
SWI/SNF complex
CC77DRAFT_996223
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CC77DRAFT_996223
PBAF complex
CC77DRAFT_996223
SWI/SNF complex
CC77DRAFT_996223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
TFIIA_gamma_N
Motif
Other DBs
NCBI-GeneID:
29122073
NCBI-ProteinID:
XP_018382229
JGI:
996223
UniProt:
A0A177DBE3
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MPSPPLADSQGLDPAHGASTNGNSSEGAVQPANAPTSINGPDSASNENNAIRDGKQKAKA
VMAASGLNLTGAQGDTASPAQPEAINGASPSRKRSRSGTRKSSRTPSHDDGAKPTTSQAH
LLDRHIARDLLDSVNKYERNKHSEKVYGELNDLRHFYRDEVYPVRRQNPGAIFGYGYAGY
GNGVTDIPPDPRDPRALPQTKLLYPEHAKRAGRRLAPQLKVSKEKGLQQADQIEELVPVR
LDIELDRLKLRDTFTWNLHDRVTNPVLFAQTLVEDFQIPPELRQNVMQQIDREIHEQVQD
YYPHAFFDDEPLDPHQPYSAYKNDEMRILIKLNITIGQHTLVDQFEWEINNPLNAPEEFA
RQMAADLSLSGEFTTAIAHSIREQCQMFTKSLYITGHPFDGRPVEDTDIQDNFLASPLPS
VFRPMQSTKDYQPYLYELSNADLERAELSIMREQRRQKRSVNRRGGPALPDLKDRQRTVR
TLVVSSVLPGAAETIEDSQLFKATRKIREGRRRGADGSSDESDSDESVVDSPAPAQLTGG
TARTRGMRGAATAAQAAMRSAIGRSATPEVSNIQPHHEPRASRSLRYEAREESVSEPTTL
IVKLRISPVKLRELQRNPRAFAKPASTPMVAPSQPPTRSTPTANSMPPPPSPAIPTRSTP
TASASVEASPKPPPTPTPTTQNKQWQYRPDGSLEAPWPTPAVSQHPPTPPWLQQALQDLR
DRNPGELFESTMRYAVMNERYEDPKTGDIVSRQVKLDTLQPNAPLPANHKAYFLPRIRCI
DCPGKLYNAGPEQTVNNFELHLKNRVHMENVRKRTGQPL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccctctccgccgctagccgactcccaaggcctcgatcccgcccacggcgcgtccaca
aacggcaacagcagtgaaggtgctgtccaacccgcaaacgccccaaccagcatcaatgga
cccgacagcgcgtccaacgagaacaacgcgattcgagacggaaagcagaaggccaaggct
gtcatggcggcttctggcttgaacctcaccggcgcgcagggcgacacggcatcgccagcg
cagcccgaagccatcaacggcgcgtcgcctagtagaaagcgatcgcgttcgggaacccgc
aagtcttcacgcacgccttctcacgacgatggcgcgaaacccacaacctcgcaggcccat
ctcctcgaccgccacattgcgcgcgacctcctcgacagcgtaaacaagtacgagcgcaac
aaacattccgagaaggtctatggcgagctgaacgacctgcgccatttctaccgcgacgag
gtataccctgtccgacgacagaaccccggcgccatctttggatatggctatgctggctac
ggcaacggcgtgaccgacataccacccgatcccagagacccgcgagccctaccgcaaacg
aagctgctatatcccgaacatgccaagcgcgccggtcgtcgactcgcgccgcaactcaag
gtttcgaaagagaagggtttgcagcaagcagaccagatcgaagagcttgtgcctgtgcgt
ctggacatcgaattagacagactgaaactacgcgacacttttacctggaacctccatgac
cgtgttaccaaccctgtgctcttcgcccagaccctcgtcgaggacttccagataccaccc
gagctgcgtcagaacgttatgcaacaaatcgatcgcgagatccacgagcaggttcaagac
tactaccctcacgctttcttcgatgatgagcctctggacccccatcagccatactcggca
tacaagaatgacgagatgcggatattgatcaaattgaacattaccattggccaacacact
cttgtggaccagttcgagtgggaaatcaacaatcctctgaatgcgcccgaggaatttgca
aggcagatggctgctgatttgtcactgtccggagagttcactaccgccattgcccattcc
ataagagagcagtgtcagatgttcacaaagagcctgtacatcacaggtcatcccttcgat
ggacgaccagttgaagataccgatatccaggacaacttcttggcctcaccactcccctct
gtattccgcccgatgcagtctacaaaggattaccagccgtacctatacgaactgagtaac
gctgacctagaacgagccgaactatcgattatgcgcgaacagcggcgccagaaacgatct
gtcaacagacgtggcggccctgccctgccagaccttaaagaccgccaacggacagtacgc
accttggttgtttcttcagtcctacctggtgctgcagaaaccatcgaggacagtcagctc
ttcaaggctacacgcaaaattagagagggccgccgtcgtggtgctgatggaagctcagac
gaatcggatagtgacgaatcggtagtagactctcccgcacctgcgcaactgaccggaggt
actgcgcggacccggggtatgcgtggagctgccactgctgctcaagctgctatgcggtcc
gctattggaagatcagcaacccccgaagtgtccaacattcaacctcatcacgagccacgg
gcatccagatcactacgatatgaggcgcgggaagagagtgtatctgagcctacaacactc
atagtcaaactccgcatatcgcccgtcaaacttagggaattgcagagaaacccaagggct
ttcgcaaagcccgcctcgactcccatggtggccccctcgcaacccccaacacgaagcaca
cctaccgcaaactcaatgccacctccaccatcaccagccatacctactcgttcaacccca
accgcatcagcttcggtagaagcttcgccgaaacctccgcctacgcccacaccaacgacc
cagaacaagcagtggcagtacaggccggatggttcacttgaggcaccttggccaacgccc
gccgtttctcaacatcctcccactcctccgtggcttcaacaagcactccaggatctacgt
gatcgaaatcccggcgagctcttcgaatctactatgcgctatgctgtcatgaatgagcgc
tacgaggacccgaagacgggcgatattgtgtcccgacaagtcaagcttgatacgctacaa
ccaaatgcccccctgccagcgaaccacaaagcatatttcttgccgcgaatccggtgcata
gactgcccgggcaaattgtacaatgctggacccgagcaaacagtcaataatttcgaacta
catctgaagaaccgcgtacatatggagaacgtgcgcaaacggactggacagcctttgtag
DBGET
integrated database retrieval system
