Algihabitans albus: ABWI00_00285
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Entry
ABWI00_00285 CDS
T10848
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aalu Algihabitans albus
Pathway
aalu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWI00_00285 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalu03019
]
ABWI00_00285 (recQ)
03400 DNA repair and recombination proteins [BR:
aalu03400
]
ABWI00_00285 (recQ)
Enzymes [BR:
aalu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWI00_00285 (recQ)
Messenger RNA biogenesis [BR:
aalu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABWI00_00285 (recQ)
DNA repair and recombination proteins [BR:
aalu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABWI00_00285 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
XHC50494
LinkDB
All DBs
Position
complement(63082..64950)
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AA seq
622 aa
AA seq
DB search
MLECPVRVADENRGVFADPRQALREVFGHEAFRGLQADAIEALLKGRDALVVAPTGFGKS
ACYQIPALCRPGIAVVVSPLIALMADQVAQLREAGVVADMLNSALPEGERRAVLERLRSG
QTRLLYVAPERLLMDGTLELLERCQISLIAIDEAHCVSQWGHDFRPEYRRLSALTGWFPT
VPRIALTATADAQTRADILNQLQMAEAEVLVGGFDRPNLRWNFAEKREPLRQLDRFLAAR
PEGSSGIVYVRSRKKAEQTAERLAAMGYAAEAYHAGLDAELRADRQARFQREDGRVMVAT
IAFGMGIDKPDVRWVVHLDLPRSLEAWYQEVGRAGRDGLPSETLTLFGPQDVSFTRRMIR
ESDAPDEVKRVELLKLEQLVGLAEGVGCRRQAVLAYFGDSCDPCGNCDACLEPQEAVDGT
AAAQKALSAVYRTDQVFGAAHIVDVLRGVESEKVLRNRHQTLAVFGMGAETAEAEWRSIL
RQLTTRGLLEVDLEGHGGLRLGPAERVRPVLRGETEVTLRRPPPRALSPSRSRRGEAAGK
TTPAAELSGADTVLFESLKAKRREMAEAAGVPPYVVFHDRTLIEMALLRPGSRAAFAELP
GVGRSKLDKYAETFLAVIAAET
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctagagtgtcccgtccgagtcgcagacgaaaaccgaggggtcttcgccgatccgcgc
caggcgctgcgcgaagtcttcggtcatgaggcttttcgaggcctgcaagccgatgccatt
gaggcgctgctaaaggggcgcgacgctctggtcgtcgcgccgaccggcttcggcaaatcg
gcctgctatcagattcccgccctctgccgcccgggtatcgccgttgtggtttcgccgctg
atcgccctgatggccgaccaggtggcccagctgcgcgaggccggcgtcgtcgccgacatg
ctgaactcggccttgcccgagggggagcgccgcgcggtgctggagcgcctgcgcagcggg
caaacccgcctgctctacgtcgcgcccgagcggctgctgatggacggaacgctcgagctg
ctggagcgttgccagatctcgctgatcgccatcgacgaagcgcactgcgtgtcgcaatgg
gggcacgacttccgccccgagtatcggcggctctccgccctcacaggctggttccccacg
gtgccgcggatcgcgctgaccgccacggcggacgcccagacccgtgcggacattctcaac
cagttgcagatggccgaggcggaggtcctggtcggcggcttcgaccgcccgaatctgcgc
tggaactttgcggaaaagcgcgagccgctgcgccagctcgaccgcttcctggcagcgcgg
ccggagggctcctccggcatcgtctatgtgcgctcgcgcaagaaggcggagcagacggcc
gagcgcctggccgctatgggctatgccgccgaggcctatcacgcaggtctcgatgcggaa
ctgcgcgccgaccgacaggcccgcttccagcgcgaggacggacgggtcatggtcgccacc
atcgccttcggcatgggcatcgacaaacccgacgtgcgctgggtcgtgcatctggatctg
ccgcggtcgctggaggcctggtaccaggaggtcggccgcgccgggcgcgatgggttgccg
agcgagaccctgacgctgttcggcccgcaggacgtaagcttcacgcgccgtatgatccgc
gagtccgacgcgccggacgaggtgaaacgggtcgaactgctgaagctggagcaactggtc
gggctggccgagggcgtcggctgccgccgccaggccgtcttggcctacttcggagacagc
tgcgacccctgcggcaactgcgatgcctgcctggaaccgcaggaggccgtcgacgggacc
gccgccgcccagaaagcgctttctgccgtctaccgcaccgatcaggtattcggtgccgcg
cacatcgtcgacgtgttgcgcggcgtggagagcgagaaggttctgcgcaaccgccaccag
acgctggccgtcttcggcatgggtgccgagaccgccgaagcggaatggcgctcgatcctg
cgccagctcaccacacgcggccttctggaggtcgatctggagggccatggcgggctgcgt
ctcggcccagccgagcgggtccggccggtgctgcgcggcgagacggaggtgacgctgcgc
cgaccgccgccccgcgcgctttcgccatccagaagccgcagaggagaggcggcaggcaag
acgactccggcggcggagctatcgggtgcggacacggtgctgttcgagtcgctgaaggcg
aagcgccgggagatggccgaagccgccggcgtgccgccctacgtggttttccacgaccgc
accttgatcgagatggcgctgctgcgacccggcagccgcgcggccttcgccgaactgcct
ggggtcggccgctccaaactggacaagtacgccgagaccttcctggccgtgatcgcggcc
gagacctga
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