Algihabitans albus: ABWI00_09925
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Entry
ABWI00_09925 CDS
T10848
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aalu Algihabitans albus
Brite
KEGG Orthology (KO) [BR:
aalu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalu03032
]
ABWI00_09925 (topA)
03400 DNA repair and recombination proteins [BR:
aalu03400
]
ABWI00_09925 (topA)
Enzymes [BR:
aalu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABWI00_09925 (topA)
DNA replication proteins [BR:
aalu03032
]
Prokaryotic type
DNA Topoisomerases
ABWI00_09925 (topA)
DNA repair and recombination proteins [BR:
aalu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABWI00_09925 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XHC52327
LinkDB
All DBs
Position
2129044..2131680
Genome browser
AA seq
878 aa
AA seq
DB search
MHLVVVESPAKAKTIERYLGGDYRVLASYGHVRDLPPKDGSVRPDEDFAMDWSVDDRGDK
RIKEIARELKSAQQLYLATDPDREGEAISWHIIEELNRRRALNGKPVKRVVFNEITKRAV
QDAFKHPRDLDRPLVEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICER
EAEIEAFRAQEYWTVTATLDALETAAFDARLTHLQGSKLDKFDLNSEAKAQEAVALLESA
GRFTVASVETKRSKRNPQPPFTTSTLQQEASRKLGFGATRTMRVAQKLYEGIEVSGETVG
LITYMRTDGVGMSNEAITAARELIAGRYGDRYLPDQARIYKTKAKNAQEAHEAIRPTDLQ
RLPKEVRGQLGDDEARLYDLIWTRALASQMQSAEFDQMTADIDVDGSSARLRATGSVQVF
DGFLTLYQEGRDDPEDEDGEGKRLPPLTKGQDLNRKAVTPQQHFTQPPPRFSEASLVKRM
EELGIGRPSTYASILQVLQDRDYVRLEKKRFLPEDRGRIVTAFLTAFFRRYVEYDFTASL
EEDLDRISAGDSRYKEVLLRFWQAFNQAVEETKELRISDVIDALDEDLGPHFFPTDSENP
DRDPRLCPACGTGRLGLRLGKTGGFIGCSNYPECRFTRALAVQAEDGNGGAAAGEAGPRR
LGEDPQSGQEVSLRKGPYGHYVQLGEQGEDKSVKPKRTSLPKGMAPDSVDLAAALGLLAL
PRALGSHEGAEVTAGIGRYGPYVRKANTYKSIPADEDVLTIGLNRAVDLLAQAKGGGAAA
LKTLGDHPSDSKPVTLHEGRYGPYVKHGRLNASLPKDLGIDEIDLAGAVELLVKQAEKKG
GGKKAPAKKAATKKAPSGKTSAKKATASKAKTKKTADA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggtcgtcgtcgaatctcctgccaaagccaagaccatcgaacgttatctgggt
ggcgactatcgggtgctggccagctacggccacgtgcgcgatctgccgcccaaggacggt
tcggtgcggcccgacgaagacttcgcaatggactggtccgtcgacgaccgcggcgacaag
cggatcaaggagatcgcccgcgagctgaagagcgcccagcagctctacctggcgaccgac
ccggaccgcgaaggcgaggccatctcctggcacatcatcgaggagctgaaccgccgccgg
gcgctcaacggcaagccggtcaagcgcgtggtcttcaacgaaatcaccaagcgcgccgtg
caggatgccttcaagcatccgcgcgatctcgaccggccgctggtcgaggcctacctggca
cgccgtgcgctcgactatctggtcggcttcacgctgtcgcccgtgctgtggcgcaaactg
ccgggcagccgctccgccgggcgcgtgcagtcggtggccctgaggctgatctgcgaacgg
gaggccgagatcgaggccttccgggcgcaggagtactggacggtcacggcgaccctggat
gccctcgaaaccgcggccttcgacgcgcggctcacccacctgcagggcagcaagctcgac
aagttcgacctgaacagcgaagccaaggcgcaagaggccgtggcgctgttggaaagcgcg
ggccgcttcaccgtcgcgagcgtcgaaaccaagcgcagcaagcgcaatccgcagccgccc
ttcaccacctcgaccctgcagcaagaggcctcgcgcaagctgggcttcggggcgacccgg
accatgcgcgtggcccagaagctctatgaaggcatcgaggtgagcggcgaaaccgtcggc
ctgatcacctacatgcggaccgacggcgtcggcatgtcgaacgaggcgatcacggcggcg
cgcgagctgatcgccgggcgctacggcgaccgctacctgccggaccaggcccggatctac
aagaccaaggccaagaacgcgcaggaggcgcacgaggcgatccgcccgacggatctacag
cgcctgcccaaggaggtccgcggccagctgggcgacgacgaggcgcgactctacgacctg
atctggacccgcgccctggccagccagatgcagtcggccgagttcgaccagatgacggcg
gatatcgacgtcgacggcagcagcgcgcgcctgcgcgccaccggctcggtccaggtcttc
gacggcttcctgacgctctatcaggaaggccgcgacgacccggaggacgaggacggcgaa
ggcaagcgcctgccgccgctgaccaagggccaggacctcaaccgcaaggccgtcacgccg
cagcagcacttcacccagccgccgccgcgcttcagcgaggcgagcctggtcaagagaatg
gaagagctgggcatcggccgcccctcgacctacgcctcgatcctgcaggttctgcaggac
cgcgactacgtccggctggagaagaaacgcttcctgcccgaggatcgcggccgcatcgtc
acggctttcctgaccgccttcttccgccgttacgtggagtacgacttcaccgccagcctg
gaggaggatctcgaccgcatctccgccggggacagccgctacaaggaggtgctgctgcgc
ttctggcaggccttcaaccaggccgtcgaggagacgaaggagctgcgcatctccgacgtc
atcgatgcgctggacgaggacctcggcccccacttcttcccgacggattcggagaatccg
gaccgcgacccgcgcctctgtccggcctgcggcaccggccggctcggcctgcggctcggc
aagaccggcggcttcataggctgctccaactatccggagtgccgcttcacccgcgccctt
gcggtgcaggccgaggacggcaacggcggcgcggccgccggcgaggccggcccccggcgc
ctgggcgaagatccgcaaagcggccaggaggtcagcctgcgcaagggaccctacggtcac
tacgtgcagctcggcgagcagggagaggacaagtcggtcaagcccaagcgcacgtcgctg
ccgaagggcatggcccccgacagcgtcgacctggcggcggcactcggcctgctggcgctg
ccgcgcgccctgggcagccacgaaggcgcggaggtcaccgccggcatcggacgctacggc
ccctacgtgcgcaaggccaacacctacaagtcgattccggcggacgaagacgtcctgacc
atcggtctcaaccgggcggtcgatctgctcgcccaggccaagggcggcggcgcggcggcc
ctgaagacgctgggcgaccatccgagcgacagcaagccggtgaccctgcacgaaggccgc
tacggcccctacgtcaagcacggccggctcaatgcctccctgccgaaggatctggggatc
gacgagatcgatctcgcgggtgccgtcgagctgctcgtcaagcaggccgagaagaagggc
ggcggcaagaaggcgccggcgaagaaggcggctaccaagaaagcgccatctggtaagact
tcggccaagaaggcgaccgcatccaaggcgaagacgaagaagacagccgacgcctag
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