Algihabitans albus: ABWI00_16645
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Entry
ABWI00_16645 CDS
T10848
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aalu Algihabitans albus
Brite
KEGG Orthology (KO) [BR:
aalu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalu03032
]
ABWI00_16645 (gyrB)
03400 DNA repair and recombination proteins [BR:
aalu03400
]
ABWI00_16645 (gyrB)
Enzymes [BR:
aalu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABWI00_16645 (gyrB)
DNA replication proteins [BR:
aalu03032
]
Prokaryotic type
DNA Topoisomerases
ABWI00_16645 (gyrB)
DNA repair and recombination proteins [BR:
aalu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABWI00_16645 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
KorB
HATPase_c_3
UFD1_N2
Rotamase_2
Motif
Other DBs
NCBI-ProteinID:
XHC49406
LinkDB
All DBs
Position
3610629..3613085
Genome browser
AA seq
818 aa
AA seq
DB search
MADETPTPQRIEEDPAAYGAELIKVLRGLEAVRKRPGMYIGDTDDGTGLHHMVYEAVDNA
IDEALAGHCDLVEVQLNGDGSVMVRDNGRGIPTEIHKEEGVSAAEVIMTRLHAGGKFDQN
SYKVSGGLHGVGVSVVNALSEWLELRIWRDGSEHLIRFRHGEAEAPLEALGPAPDRSGTE
VTFLPSTETFTMVEFDQATLEHRLRELAFLNSGVHIRLTDARHPEPKVVDLHYEGGVEAF
VRYLDRAKTPLIDPPVVIAAERDGIVVEAALQWTDAFHEATLCFTNNIPQRDGGTHLAGF
RAALTRQVNAYATGTGLAKKEKVSLAGEDCREGLTCVLSVKVPDPKFSSQTKDKLVSSEV
RPVVETILNEKLEQYFEEHPAEARRIVSKVVEAAAAREAARKARELTRRKSALDVASLPG
KLADCQERDPALSELFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERARFDKMLSSQ
EIGTLITALGTGIGPDEFDLGKLRYHKIVIMTDADVDGSHIRTLLLTFFFRQMRPLIEAG
NLYIAQPPLYKVKRKSSEQYKKDDNEMERFLIEQGAEGALLTLYDGTQIAGSDLQNLVRQ
AVDARHLMAPLARKAGALEMVEQAAIAGALNAQILAESEQAAEVAAYLARRLNALHADQE
WEPDWTPGVGADGGLVFSRMLRGVTQHRQIDATMLRSAEARRLDAVAPQLQETYAKAGTL
AGADGEEVAVHGPSDLADAVLRWGRKGVSVARYKGLGEMNPDQLWQTTLDPEARTLLKVR
VAQAEAADGLFDTLMGDVVEPRREFIQDNALEVSNLDV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgagaccccaacaccgcagcgaatcgaagaggatcccgctgcctacggtgcc
gaattgatcaaggtcctgcgcggcctggaggccgtgcgcaagcgccccggcatgtacatc
ggggataccgacgacgggaccggcctgcaccatatggtctacgaggcggtcgacaacgcc
atcgacgaggcgctcgccggccactgcgacctcgtcgaggtgcagctgaacggcgatggc
agcgtcatggtgcgcgacaacggccgcggcattccgaccgagatccataaggaggaaggg
gtttccgccgccgaagtcatcatgacccgcctgcatgccggcgggaagttcgaccagaac
tcctacaaggtgtccggcggtctgcacggcgtcggcgtctcggtggtcaatgcgctcagc
gagtggctcgagctgcggatctggcgcgacggcagcgagcacctgatccgctttcgccat
ggcgaagcggaagcgccgctggaggccttgggcccggcaccggacaggtccggcaccgag
gtcaccttcctgccgagcaccgaaaccttcaccatggtcgagttcgatcaagccacgctg
gagcaccgcctgcgcgagctggccttcctgaactccggcgtgcatatccgcctgaccgat
gcgcgccatcccgagcccaaggtcgtggatctgcactacgaaggcggcgtcgaggccttc
gtgcgttacctggaccgcgccaagactccccttatcgatccgcctgtggtcatcgcggcc
gagcgcgacggcatcgtggtcgaggccgcgcttcagtggaccgatgccttccacgaggcg
acgctctgcttcaccaacaacattccgcaacgcgacggcggcacccacctggccggcttc
cgcgccgccctgacacgccaggtcaacgcctacgcgaccggcaccggtctcgcgaagaaa
gagaaggtttccctggccggcgaggactgccgcgagggcctgacctgcgtcctgtccgtc
aaggtgcccgacccgaagttctccagccagaccaaggacaagctggtttccagcgaagtt
cgtcccgttgtcgaaacgattttgaacgagaagctggagcagtacttcgaggagcatccc
gccgaggcccggcgcatcgtctccaaggtggtcgaggccgccgccgcccgcgaggccgcg
cgcaaggcccgcgaactgacccgccgcaagtccgcgctcgacgtcgcctccctccccggc
aagctggccgactgtcaggagcgggatccggcgctctccgaactcttcatcgtcgagggc
gactcggccggcggctcggccaagcagggccgcgaccggcgcttccaggccatcctgccg
ctgcgcggcaagatcctgaacgtggaacgcgcccgcttcgacaagatgctgtcgagccag
gaaatcggcacgctgatcacagccttggggaccggcatcggcccggacgagttcgatctc
ggcaagctgcgctaccacaagatcgtcatcatgaccgacgccgacgtcgacggcagccac
atccgtacgctcctgctgaccttcttcttccgccagatgcgcccgctgatcgaagctggg
aacctctacatcgcccagccgccgctctacaaggtcaagcgcaagtcgtccgagcagtac
aagaaggacgacaacgagatggagcgcttcctgatcgagcagggcgccgagggggcgctc
ctgaccctctacgacggcacccagatcgccggcagcgacctgcagaatctggtgcgccag
gccgtcgacgcccgtcatcttatggcccccctggcacgaaaggccggcgccctggagatg
gtcgaacaagccgcgatcgccggcgccctcaacgcacagatcctcgcggaatccgagcag
gcggcggaggtggctgcctatctcgcgcgccggctcaatgccctgcacgcggatcaggag
tgggagccggactggacccccggcgtcggcgcggacggcggcctggtcttctcgcgcatg
ctgcggggcgtgacgcagcaccgccagatcgatgccaccatgctgaggtcggcagaggcc
cgacggctcgacgccgtggcgccccagctgcaggaaacttatgccaaggcgggaacgctg
gcgggggccgacggagaggaggtcgcggtgcatgggcccagcgacctagccgacgcggtg
ctgcgttggggtcgcaagggcgtctccgtcgcccgctacaagggcctgggcgaaatgaac
ccggaccagctctggcaaacgaccctcgaccccgaagcgcgcacgctgctgaaggtgcgg
gtcgctcaggcagaggccgcggacggtctgttcgacaccctgatgggggacgtggtggaa
ccgcgccgggagttcatccaggacaacgccctggaggtctccaacctggacgtctag
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