Algihabitans albus: ABWI00_17265
Help
Entry
ABWI00_17265 CDS
T10848
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aalu Algihabitans albus
Pathway
aalu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWI00_17265 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalu03019
]
ABWI00_17265 (pnp)
03016 Transfer RNA biogenesis [BR:
aalu03016
]
ABWI00_17265 (pnp)
Enzymes [BR:
aalu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABWI00_17265 (pnp)
Messenger RNA biogenesis [BR:
aalu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABWI00_17265 (pnp)
Transfer RNA biogenesis [BR:
aalu03016
]
Prokaryotic type
tRNA degradation factors
ABWI00_17265 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XHC49524
LinkDB
All DBs
Position
complement(3735798..3737915)
Genome browser
AA seq
705 aa
AA seq
DB search
MFTIHKKELDWGGRKLTLETGRIARQADGAVLATYGETQVLCTVVGAKSGRDVDFFPLSV
HYQEKTSATGKIPGGFFKREGRPTEKEVLTSRLIDRPIRPLFVKGFRNETQVICTVLSHD
LENDPDIVAMVGTSAALTISGLPFLGPIGGARVGYIDGEYVLNPARDELPSSALDLVVAG
TQDGVLMVESEAQELTESIMLGAVNFGHDQMQPVIQAIIDLAEQAAKDPWDLAPEPEAKA
PLAARLKDAFGNKLVEAYGIADKTERRDAVEAVKEEAKASIGDNDEELAVFGDVFKTLES
DVVRGTILDTGSRIDGRDTRTVRAIDCQVGVLTRTHGSALFTRGETQALVTTTLGTGSDE
QIIDALEGEYREAFLLHYNFPPYSVGEAGRFGSPGRREIGHGKLAWRAIRPVLPSREDFP
YTLRIISEITESNGSSSMATVCGTSLSMMDAGVPLPRPVAGIAMGLIKEGERFAVLSDIL
GDEDHLGDMDFKVAGTETGITSLQMDIKITSITREIMQIALDQAKDGRLHILGEMAKAIS
SAREGVSSHAPRITTISIPRDKIREVIGTGGKVIREICETTGAKIDIEDDGTIKVAAVEE
SAMQRALDWIESIVAEPEVGKIYNGKVVKIMDFGAFVNFLGPRDGLVHISQLAPQRVQTV
GEVVKEGDEVKVKVLGLDDRGKVKLSMKVVDQETGEDLTAEQAAS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaatccacaagaaggaactcgactggggcggccgtaagctgaccctggagacc
gggcgcatcgcgcgacaggcagacggcgccgtactggcgacctacggcgaaacccaggtg
ctctgcaccgtggtgggcgctaagtccggccgcgacgtcgacttcttccccttgagcgtc
cactatcaggagaagacctcagccaccggcaagatccccggcggcttcttcaaacgcgag
ggccggccgaccgagaaggaggtgctgacctcccgcctgatcgaccgcccgatccggccg
ctcttcgtcaaaggcttccgcaacgaaacccaggtcatctgcacggtcctgagccacgac
ctggagaacgatcccgacatcgtggccatggtcggcacctcggcggcactgaccatctcg
ggcctgcctttcctgggtccgatcggcggcgcccgcgtcggctatatcgacggcgagtac
gtgctcaaccccgcgcgcgacgaactgcccagttccgccctcgatctggtcgttgccggc
acccaggacggcgtgctgatggtcgagtccgaggcgcaggagctgacggaatccatcatg
ctgggcgccgtcaacttcggtcacgaccagatgcagccggtgatccaggcgatcatcgat
ctggccgagcaggccgccaaggacccctgggatctggcgccggaaccggaagccaaagcg
ccactggccgcgcggctcaaagacgcgttcggcaacaagctggtcgaggcctatggcatc
gccgacaagaccgagcggcgcgacgccgtcgaggccgtcaaggaggaggcgaaggcctcc
atcggcgacaacgacgaggaactcgccgtcttcggcgacgtcttcaagacactggaaagc
gacgtggtccgcggcacgatcctggacaccggcagccggatcgacggccgcgacacgcgg
acggtgcgggcgatcgactgtcaggtcggcgtgctgacccgcacgcacggctcggcgctc
tttacccgcggcgagacccaggcgctggtcacgacgacgctcggtaccggcagcgacgag
cagatcatcgatgcgctcgagggcgagtatcgcgaggccttcttgctgcactataacttc
ccgccctattccgtgggcgaagccggacgtttcgggtcgccgggccggcgcgagatcggg
cacggcaagctcgcatggagagcaatccgcccggttctgccgagccgcgaagactttccc
tacaccctgcgcatcatctcggagatcaccgagtccaacggctcgtcctccatggcgacg
gtctgcggtaccagcctttcgatgatggacgccggcgtcccgctgccgcgccccgtggcc
gggatcgcgatgggcctgatcaaggagggcgagcgcttcgccgtgctctccgacatcctg
ggcgacgaggatcatctcggcgacatggacttcaaggtggccggcacggaaaccggaatc
acctccttgcagatggacatcaagatcacctcgatcacccgcgagatcatgcagatcgcg
ctggaccaggccaaggacggccgcctgcacattctgggcgagatggcgaaggccatcagc
agtgcccgggagggcgtatcctcccatgcgccccggatcacgaccatcagcattccgcgc
gataagatccgcgaagtgatcggcacgggcggcaaggtcatccgggagatctgcgaaacc
accggcgcgaagatcgacatcgaggacgacggcaccatcaaggtcgcagccgtcgaggag
agcgcgatgcagcgggcgctggactggatcgagtcgatcgtcgccgaaccggaagtcggg
aagatctacaacggcaaggtcgtcaagatcatggacttcggcgccttcgtgaacttcctg
ggtccccgcgacggtctggtgcacatctcgcagctcgcgccgcagcgcgtgcagacggtg
ggcgaggtcgtcaaggaaggcgacgaggtgaaggtcaaggtcctgggcctggacgatcgc
ggcaaggtcaagctgtcgatgaaggtggtcgaccaggagaccggcgaagacctgacggca
gagcaagcggcctcctaa
DBGET
integrated database retrieval system
