Algihabitans albus: ABWI00_18940
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Entry
ABWI00_18940 CDS
T10848
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aalu Algihabitans albus
Pathway
aalu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aalu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ABWI00_18940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalu03019
]
ABWI00_18940
03009 Ribosome biogenesis [BR:
aalu03009
]
ABWI00_18940
04131 Membrane trafficking [BR:
aalu04131
]
ABWI00_18940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aalu04147
]
ABWI00_18940
Messenger RNA biogenesis [BR:
aalu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ABWI00_18940
Ribosome biogenesis [BR:
aalu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ABWI00_18940
Membrane trafficking [BR:
aalu04131
]
SNARE
SNARE associated proteins
Others
ABWI00_18940
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ABWI00_18940
Exosome [BR:
aalu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABWI00_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_22
TIP49
AAA_14
AAA_33
AAA_2
nSTAND3
AAA_28
NPHP3_N
IstB_IS21
RNA_helicase
AAA_3
Mg_chelatase
SLFN-g3_helicase
Sigma54_activat
Zeta_toxin
TsaE
CDC48_2
AAA_18
Parvo_NS1
AAA_7
AAA_17
AFG1_ATPase
AAA_24
Molydop_binding
PhoH
Zot
Motif
Other DBs
NCBI-ProteinID:
XHC49843
LinkDB
All DBs
Position
4083568..4085712
Genome browser
AA seq
714 aa
AA seq
DB search
MTAPADASVAQTAPEMQGGSLKVAEAMAKDTGRGIARLDPRDMRELGLEIGDVVEVLGKH
GALCRVLPAHTDQRGQRLIQIDGILRANAGTGLDQHVTVRRVVTRRARSVVLATVESSGR
SLPSRYLTKLLDGIPVQRGNRVRVTPFGPQPHTFVVQRSDPPGQVIFDRTTQVRCEGTAD
AQSAVTYEDIGGLHKEVRRVREIIELPLKHPEVFEHIGIDPPKGVLLYGPPGTGKTLIAR
AVAHEASVHFIHVNGPEIIDKVYGASEAHLRKVFEEAKQNAPAFIFIDEIDAIAPSRTQL
NSDRQMERRVVAQLLALMDGLNTRGQVIVAAATNIPDSIDPALRRPGRFDRETEIGVPDR
DGRMEILEIHSRGMPLGQGVTLDGLAGMTHGFVGADLAALCREAAMAAVRRLLPDIDLDE
GVVPVDRLSELRVERDDFEEALNEVGPSALREIAADISETRWSDVGGLDEIKQTLHEAAV
LPLTHGPLFARMGVRPPRGILLHGGPGRGKTLLARALAGECEANFIAVQGPQLVSMWVGE
SERAVRELFRKAKQARPCVVFIDEIDAVAPRRGSGEDPVSERLVAQFLVALDGMEQLQDI
TVIAATNRVDRLDPALIRPGRFDCLIELPLPDEGQREAILRIHTDRMPLAGDVAISALSR
QTTDWSGAALAALCRNAAVRAIRRRLSPDAAGPAVVTEADFAGALEATRRGRTA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaccggcagatgcctccgttgcccagacggcgcccgaaatgcagggcgggagt
ttgaaggtggccgaagccatggccaaggatacggggcgcggaatcgcgcgcctggacccg
cgtgatatgcgtgagctggggttggaaatcggcgatgtcgtcgaggttctcggcaagcac
ggcgcgctctgccgggtgctgccggcccataccgatcagcgcggccagcgtttgattcag
atcgatggcatcctgcgtgcgaacgcgggaaccggcctcgatcagcacgtcaccgttcgc
cgggtcgtcacccggcgggcacgctcggtcgtgttggcgacggtcgagtcttccggacgc
agtctgccgtcccgctacctgaccaagctgctggacggcatcccggtccagcgcggcaac
cgcgtgcgggtcacgcccttcgggccgcagccgcacaccttcgtggtgcagcgcagcgat
cctccgggtcaggtgatcttcgaccgaacgacccaggtgcgctgcgaaggaaccgccgac
gctcagagcgcggtgacctacgaggacatcggcggtctgcacaaggaggtccgccgcgtc
cgcgagatcatcgagctgcccctgaagcaccccgaggtcttcgagcatatcggcatcgat
ccgcccaagggggtgctgctctacggtccaccgggtacaggcaagaccttgattgcgcga
gcggtcgcccacgaggccagcgtgcatttcattcacgtcaacgggcccgagatcatcgac
aaggtctatggcgccagtgaggcgcatctccgcaaagtcttcgaggaggcaaagcagaac
gcgcccgcattcatctttatcgatgagatcgatgcgatcgcgcccagccgtacgcagttg
aacagcgatcgccagatggagcggcgtgtggttgcgcagctgctggcactgatggatggc
ctcaatacccggggtcaggtgatcgtcgcggccgcaacgaacattcccgatagcatcgat
ccggcgctccgccggcccgggcgtttcgaccgcgagaccgagatcggcgtgcctgaccgg
gacggccgaatggagatcctggagattcacagccgcggcatgcccctggggcagggtgtg
acgctcgacggtctcgcaggtatgacccacggcttcgtcggggccgatcttgccgcgctc
tgccgggaagcggcgatggcggcggttcggcgcctgctgcctgacattgatctggacgaa
ggcgtggtgccggtcgacaggctgagcgagctgcgtgtcgagcgcgacgatttcgaagag
gcgctcaacgaagttggcccctcggccttgcgcgagatcgcggccgatatctcggagacc
cgctggagcgatgtcggcggactcgacgagatcaagcagacgctacacgaagcggccgtg
ctgcctctgacccacggtcccctgtttgcccgcatgggcgtgcggccgccgcgcggcatt
ctgctgcacggcgggccgggccgcggcaagaccctgctggcgcgggcgttggccggcgaa
tgcgaagccaacttcatcgccgtgcaaggaccgcagctcgtcagcatgtgggtcggtgaa
tccgaacgcgccgtacgcgagctcttccgcaaggcgaagcaagccaggccctgcgttgtc
tttatcgatgagatcgacgccgtcgcgccgcgtcggggcagtggcgaggacccggtatcg
gagcgcctggtcgctcagttcctggtggcactcgacggtatggagcagttgcaggatatc
accgtcatagcggcgaccaatcgcgtcgatcgtctggaccccgccctgatccgtccgggc
cgctttgactgcttgatcgagttgccgctgcccgacgaaggtcagcgcgaagcgatcctt
cgcatccacaccgaccgaatgccgctggcgggcgacgtcgcgatttccgccctgtcgcgg
caaacgaccgactggtcgggcgccgcgctggctgcgctctgccgcaacgcggccgtgcgc
gcgattcgacgccggctcagcccggatgccgccgggccggccgtggtgacggaagcggac
tttgccggagctctcgaggcaacccgcagagggaggactgcatga
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