Apteryx mantelli mantelli (North Island brown kiwi): 106482289
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Entry
106482289 CDS
T04298
Symbol
COL18A1
Name
(RefSeq) collagen type XVIII alpha 1 chain
KO
K06823
collagen type XVIII alpha
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aam04147
]
106482289 (COL18A1)
00535 Proteoglycans [BR:
aam00535
]
106482289 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
aam00536
]
106482289 (COL18A1)
Exosome [BR:
aam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106482289 (COL18A1)
Proteoglycans [BR:
aam00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106482289 (COL18A1)
Glycosaminoglycan binding proteins [BR:
aam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106482289 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106482289
NCBI-ProteinID:
XP_013795296
UniProt:
A0A8B7I8W4
LinkDB
All DBs
Position
Un
AA seq
1543 aa
AA seq
DB search
MAIGSRGFYPLGRCPLRRLLLGLFVLLVPAAFQEPENLSTEVSLLELIGDPPPEEILKIY
GPDNNPGYVFGPSANTGQVARYHLPSPFYRDFSLLFHIQPTTPRAGVLFAITDSSQSIIY
VGVKLSDLRAGKQQIIFYYTEPDSQSSYAAATFTVPTLLNRWTRFAISVEEDEVVLYLDC
EEHERVRFERSPDDMELEDGSGLFVAQAGGADPYLIENLSTEVSLLELIGDPPPEEILKI
YGPDNNPGYVFGPSANTGQVARYHLPSPFYRDFSLLFHIQPTTPRAGVLFAITDSSQSII
YVGVKLSDLRAGKQQIIFYYTEPDSQSSYAAATFTVPTLLNRWTRFAISVEEDEVVLYLD
CEEHERVRFERSPDDMELEDGSGLFVAQAGGADPDKYQGVIADLKLKGDPRAAEHQCEEE
EDDAEEVSGDFGSGAEDGHHPLGKDRGVPGLADAVPVTSPPVAEGSVPRISAGSPTQAER
AGVEETLLVSAGGTGPKEERGEKGERGPKGDLGTGSVLGTGSAKGEKGEKGDVGIKGSAG
FGYPGSKGQKGEPGDPGPPGTVVQRPDGSVAEQVTGPPGPAGPPGPPGKDGAPGRTFIDM
EGSGFGSDLDSLRTDLPGPPGLPGRDGSPGPPGPAGPPGPPGKDGMAGQPGPKGERGDVG
DLGLPGAPGPKGSKGETGPAGAPGEMGLAGLPGPVGPRGQPGPPGPPGPPGPGYEAGFGD
MEGSGLPFAAGSTGPRGPEGPQGLPGLPGIKGDAGSPGQPGLPGLKGDPGMPGVDGRPGL
EGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGLPGPPGQVIYISNEDKSLAAFPGPEG
RPGHAGFPGPMGPKGDQGSPGFQGSPGLKGEKGEPGVIISPDGTIIAANVKGEKGEPGPR
GPVGPSGPHGRSGQKGEIGFPGRPGRPGMNGLKGEKGDPANVSGMPGPRGPPGPPGPPGP
PGLPGSAVYDNNNAFGDTSHPALPAFPGFHQFPGQKGEKGDVGAPGPPGQFPYDLSRFSA
NLRGPPGPPGPPGPPGLPGSAVYDNNNAFGDTSHPALPAFPGFHQFPGQKGEKGDVGAPG
PPGQFPYDLSRFSANLRGEKGEAGLKGEKGEPGGTALYGSSVSALPGPPGPQGYPGLPGP
KGDSIVGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISIPGPPGPPGPP
GPPGTSGTSPGLRTLPTYQAMLSTTHELPEGWLVFLADRQELYVRVRNGFRRVLLEEHTL
ISSSALDNEVYDKPPSVHYSHGGAVPSGSQHPFQPRGPLHPLRNHSPPPTARPWRGDDIV
ANQHRLPEQPLLHHGAQHQQELLNSYYINHRPDPAPVATHVHQDFQPALHLVALNAPLSG
SMRGIRGADFQCFQQAREVGLLGTFRAFLSSRLQDLYSIVRRADRSTVPIVNLRDEVLFN
NWESLFAGSEAPMRAGARILSFDGRDILRDSAWPQKSVWHGSDAKGRRLTESYCETWRTE
ERAAVGQASSLSSGKLLEQAASSCQHAFVVLCIENSFMTASKK
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggccattggctccaggggcttttaccctctgggcaggtgtcccctgcggcggctgctg
ctcgggctctttgtcctgctggtccccgccgctttccaggagccggagaatttgagcact
gaggtcagcctcctggagctgatcggagaccccccaccagaggagatcctcaaaatttac
ggccccgacaacaacccaggctatgtctttggacccagtgccaacacaggccaggtggcc
cggtaccacctgcccagccccttttaccgggacttttctctcctgttccacatccagccc
accaccccccgggctggtgtgctctttgctatcacggactcctcgcagagcatcatctat
gtgggcgtcaagctctcggacctgcgggcaggtaagcagcagatcatcttctactacaca
gagccagactcccagagctcctatgcagcggccaccttcaccgtgcccaccctgctgaac
cggtggacacgctttgccatcagtgtggaggaggatgaagttgtcctctacctggactgc
gaggagcacgagcgggtccgcttcgagcgctccccagatgacatggagctggaagatggt
tctgggctcttcgttgctcaggctggaggagctgacccntatttaattgagaatttgagc
actgaggtcagcctcctggagctgatcggagaccccccaccagaggagatcctcaaaatt
tacggccccgacaacaacccaggctatgtctttggacccagtgccaacacaggccaggtg
gcccggtaccacctgcccagccccttttaccgggacttttctctcctgttccacatccag
cccaccaccccccgggctggtgtgctctttgctatcacggactcctcgcagagcatcatc
tatgtgggcgtcaagctctcggacctgcgggcaggtaagcagcagatcatcttctactac
acagagccagactcccagagctcctatgcagcggccaccttcaccgtgcccaccctgctg
aaccggtggacacgctttgccatcagtgtggaggaggatgaagttgtcctctacctggac
tgcgaggagcacgagcgggtccgcttcgagcgctccccagatgacatggagctggaagat
ggttctgggctcttcgttgctcaggctggaggagctgacccggataaataccagggggtg
attgccgacttgaagctgaaaggggatccccgggcagccgagcaccagtgtgaggaagag
gaggatgacgctgaagaggtatccggcgattttggcagcggagcagaggatggacaccat
cccttgggaaaagacaggggcgtcccgggtctggcagatgccgtccccgtcacttctccc
cctgtggccgagggcagcgtgccgaggatcagcgcgggctccccgacgcaggcagagcgc
gccggagtggaggagacgctgctggtgtccgcgggaggcactggccccaaagaggaaagg
ggggagaagggtgaacgcggccccaaaggggacttggggactggcagcgtcttggggaca
ggcagcgccaaaggtgaaaagggagaaaaaggtgacgtgggcatcaagggcagcgcagga
tttggctaccccggctccaagggccagaaaggcgaaccgggcgaccccggcccccctggg
actgtcgtgcagcgccccgatggctccgttgcggagcaggtcactgggccgccggggcct
gccggcccaccagggccgcctgggaaagacggagcccccggcagaacgttcatcgacatg
gagggctctgggttcggcagtgacctggacagcctgcggacagacctgccaggaccgccg
gggctgccaggccgagacgggagccctgggcccccggggccagcgggtcctccaggtcct
cctgggaaagacgggatggctgggcagccggggcccaaaggagagcggggtgacgtgggg
gacctcggcctccctggagcacctggacccaagggcagcaaaggagaaacaggaccagca
ggagctccgggagaaatggggttagctggccttcctggacccgtcggacctcgagggcag
ccaggtcccccaggccctcctggaccaccagggccggggtatgaagctggatttggcgac
atggagggctcagggctgccattcgcagctggctccactggaccacgcgggcccgaagga
ccacaggggctgccaggactgccgggaatcaagggagatgctggcagccctgggcagcct
ggcttgccaggactgaagggggacccaggcatgcctggtgtggatggccgccccggcctg
gagggcttccctggaccacagggacccaaaggtgacagaggcagccctggcgagaagggc
gagcgaggccaagatggtgttggattgcctggcccccctggtttacctggcccaccagga
caggtcatctacatctcaaatgaagataagtctttggcagcttttccaggtccggaaggc
agaccgggccatgccggcttcccgggccccatgggaccaaaaggagaccaggggtcgcct
ggcttccagggctccccagggctgaagggtgagaagggagagcctggtgtcatcattagt
ccggacgggaccatcatagctgctaatgtgaaaggagaaaagggggagccagggccgcgg
ggaccggtgggtccttctggcccccacggacggtctggacagaagggagaaatcggcttt
ccgggcagacctgggcgtccaggcatgaacgggctgaagggcgagaagggcgatcccgcc
aacgtcagcggcatgccaggcccgcggggtcccccaggtcccccaggccctccagggcct
cctgggctgcccggcagtgcagtctacgacaacaacaatgccttcggtgacaccagccat
cctgcgctgccggccttccctggtttccaccagtttccaggacaaaagggagaaaaagga
gatgttggtgctccgggtcccccaggccagttcccatacgacctgagccgattcagtgcc
aacttgcggggtcccccaggtcccccaggccctccagggcctcctgggctgcccggcagt
gcagtctacgacaacaacaatgccttcggtgacaccagccatcctgcgctgccggccttc
cctggtttccaccagtttccaggacaaaagggagaaaaaggagatgttggtgctccgggt
cccccaggccagttcccatacgacctgagccgattcagtgccaacttgcggggtgaaaaa
ggggaggcaggcctcaagggcgagaagggcgaaccaggcgggacggcgctatatggctcc
agcgtctctgcgctgccaggcccaccgggtccccagggctaccctggcctgccgggtccc
aagggggacagtattgttggtccaccggggcctccaggaccacagggaccccctggcatt
ggatatgaagggcgacagggtcctcctggccctcctggcccccctggtcctccctccttc
ccaggcccacacagacaaactatcagcattcctggccctcccggcccaccaggaccccct
ggaccaccaggtaccagcgggacatctcctgggctacgcaccctgccaacgtaccaggcc
atgctgagcaccactcacgagctgcccgagggctggctcgtcttccttgctgaccggcag
gagctctacgtccgcgtgcgcaacggtttccgcagggtgctgcttgaggagcacaccctg
atctccagctctgctctggacaacgaggtgtatgacaagccacccagtgtccactactcc
cacggcggcgccgtcccttcagggtcccagcaccccttccagccccgtgggcccctgcac
cctctccgcaaccacagccccccgcccaccgcccgaccgtggcgaggggacgacatcgtg
gccaaccagcaccgccttcctgagcagcccctgctccatcatggtgcccagcatcagcaa
gagctcctgaacagttactacatcaaccaccggccagatccagcccccgtagccacccat
gttcaccaggacttccagcctgccctccacctcgtggccctgaacgcaccgctgagcggc
agcatgcgtggcatccgaggagccgacttccagtgcttccagcaagcccgcgaggttggc
ctcctgggcactttccgggccttcctctcctcccgcctgcaggacctatacagcatcgtg
cgcagggctgaccgcagcacggtgcccatcgttaacctccgggacgaagtgctcttcaat
aactgggagtccctctttgcgggcagcgaggccccgatgcgggccggtgcgcgcatcctc
tccttcgacggccgggacatcctgcgggactcggcatggccccagaagagcgtgtggcac
ggctcggatgccaagggccggcgcctcaccgagagctactgcgaaacgtggcggacggag
gagcgggccgcggtgggccaggcctcctcgttgagctcgggcaagctcctggagcaggcg
gccagcagctgccagcacgccttcgtcgtcctgtgcatcgagaacagcttcatgaccgcc
tccaaaaaataa
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integrated database retrieval system
