Apteryx mantelli mantelli (North Island brown kiwi): 106482314
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Entry
106482314 CDS
T04298
Symbol
COPA
Name
(RefSeq) coatomer protein complex subunit alpha
KO
K05236
coatomer subunit alpha
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aam04131
]
106482314 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aam04147
]
106482314 (COPA)
Membrane trafficking [BR:
aam04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106482314 (COPA)
Exosome [BR:
aam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106482314 (COPA)
Exosomal proteins of bladder cancer cells
106482314 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
TPR_COPA_B
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
106482314
NCBI-ProteinID:
XP_013795321
LinkDB
All DBs
Position
Un
AA seq
1194 aa
AA seq
DB search
MVWLVGGCQPSFSVNLLLLFVGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLL
GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV
VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNW
AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED
KSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHG
NMLYYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENST
YDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQV
PNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHA
IMICNRKLESLCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYV
TRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQ
KKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIV
EMCYQRTKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILK
NCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPL
LTVSKGFFEGTIASKGKGGALAADIDIDTVGTEGWGEDAELQLDEDGFVDAGEGFGEEGL
GKGQEEGGGWEVEEDLDLPPELDVPAGPAGGAEDGFFVPPTKGTSPAQVWCNNSQLPVDH
ILAGSFETAMRLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPHRNWKEA
GLKNALPAVGLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEA
QQLIAICREYIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALN
LFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICA
ASYRPIYRGKPVEKCPLSGACYSPEFQGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggtctggctggtggggggttgtcagccatctttctctgtcaacctgctccttctattt
gtaggacctgttcgaggtattgacttccacaaacagcaacctctctttgtttctggaggt
gatgattacaaaataaaggtctggaattacaaattgcgccgttgtcttttcactctgctt
gggcacttggattacattcgcactaccttcttccaccacgaatatccctggatcttgagc
gcttctgatgatcagacaattcgtgtttggaattggcagtccaggacttgtgtttgtgtg
ctgacaggacacaaccactatgtgatgtgtgcccagtttcacccctctgaggacctggta
gtgtcagccagcttggatcagactgtgcgcgtttgggatatttctggcctaaggaagaag
aacctgtcccctggagctgtggaatcggatgtcaggggaataaccggggtggatttgttt
gggacaacagatgcagttgtgaagcacgttcttgagggccatgatcgtggagtgaactgg
gctgcctttcaccccaccatgccacttattgtatcaggagctgatgatcgacaagtgaag
atctggcggatgaatgaatcgaaggcctgggaggtcgacacttgccgtggacattacaac
aatgtctcgtgtgctgtctttcacccgcggcaggaactgatcctcagcaattcagaagac
aagagcatccgtgtgtgggatatgtctaaacgcacgggtgtccagacatttcgccgtgat
catgatcgcttttgggtattggctgctcatcccaacctcaacctctttgctgcaggccat
gatggtggcatgattgtgttcaaactggagcgtgagcggcctgcttatgccgtacatggg
aatatgctgtattacgtgaaggaccgtttcctccgccagcttgatttcaacagttcaaag
gacgttgctgtcatgcagctgcgaagtggttccaagttccctgtgttcaacatgtcatat
aacccagctgagaacgctgtcctcctctgcacgagagccagcaacttggagaacagcact
tatgacctatacaccattcccaaggatgcagactcccagaacccggatgcccctgaaggg
aaacgttcctccgggctaacagctgtgtgggtagctcgtaaccgctttgcagtcctggat
cgcatgcattcgatcctaatcaaaaacctgaagaatgagatcaccaagaaggtgcaggtg
ccgaactgcgatgagattttctatgctggcacagggaacctgctgctgagagatgcagac
tccatcaccctgtttgacgtgcagcagaagcgaactctggcctcggtgaagatctccaag
gtgaaatacgtcatctggtcggctgacatgtcccatgtagctttgctggctaagcacgcc
atcatgatctgcaacagaaagctggagtcactgtgtaatatccatgaaaatatccgtgtc
aagagtggtgcctgggatgagagtggtgttttcatctataccaccagcaaccacatcaaa
tatgctgtcactactggggatcatggcatcatccgcaccttggatctgcctatttatgtt
acccgtgtgaagggaaacaacgtgtactgcctggacagagaatgccgtcccagggtcctc
accattgatcccacagaattcaagttcaaactggcattgatcaacagaaaatatgatgag
gtgctgcacatggtgaggaatgctaagctcgtgggccagtccatcattgcctacctgcaa
aaaaagggctaccctgaggtggcactgcactttgtcaaggatgagaagacccggttcagc
ctggcactggaatgcggcaacattgagattgctctggaagcagccaaggctctggatgac
aagaattgctgggagaagctgggagaagtggcattgctgcagggaaatcaccaaattgtg
gagatgtgctaccaacgcaccaagaattttgataggctctccttcctctacctcatcact
ggcaacctggagaagctccggaagatgatgaagatagctgagatccgtaaagatatgagt
ggccactaccagaatgccttgtatctaggagatgtgtcagagagggtgaggatcctgaag
aactgtgggcaaaagtccctggcctatctcacagctgcaactcatggtctggatgaggaa
gctgaaagcctgaaggaaacatttgatcctgaaaaggaaacaattccagacattgatccc
aatgcaaaattgctgcagcctcctgcccctatcatgcctctggataccaactggccgttg
ctgactgtctccaagggattcttcgaaggaacaattgctagcaaaggcaaagggggtgct
ttggctgcagatattgatattgacactgttggcactgaaggctggggtgaagatgcagag
ttgcagctggatgaagatggttttgtggatgctggagaaggctttggagaagaaggccta
ggtaaaggacaggaagaaggaggcggatgggaagttgaggaagatttggaccttccccct
gaactggatgtacctgctggaccagcaggaggagctgaggatggtttctttgtgccaccc
accaaaggcaccagccctgctcaggtgtggtgtaacaattctcagcttcctgttgatcac
atcctggcaggctcctttgaaacagcaatgagactccttcatgaccaggtaggagtcaca
aacttcggtccctacaagcagctgttcctgcagacctatgcccgtggccgtacgacctat
caagccctgccttgtctcccttccatgtatggatacccgcatcgcaactggaaggaagct
ggcttgaagaacgccctccctgctgttggactgaaactcaatgacctgatccagcgcctg
cagctgtgctaccagctcactacggctggcaagtttgaggaagccgtggagaagttccgc
tccatcttgctcagtgtgcccttgctagtggtagacaacaagcaggagattgctgaggcc
cagcagctgatagccatttgccgggagtatattgtagggctctcaatggagatagagcgg
aagaagctgcccaaagagaccctggagcagcagaagcgcatttgtgagatggctgcctat
ttcacccactccaacctgcagcctgtccacatgatcttggtgctgcgcactgctctcaac
ctctttttcaaactcaaaaacttcaagacagctgctacctttgctcgtcggctgctggaa
ctgggtccaaagcctgaggtggcgcagcagacccgcaagatcttgtctgcgtgtgagaag
aatcccactgacacctaccagctcaactatgatatgcacaacccctttgacatctgtgct
gcctcttaccggcccatatatcgtggcaaacctgtggagaagtgtccactcagtggagcc
tgctactctcctgagttccaggggcagatctgccgtgtcaccacagtgacagagatcggc
aaagatgtcattgggctgcggatcagcccactccagttccgctag
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integrated database retrieval system
