Apteryx mantelli mantelli (North Island brown kiwi): 106482568
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Entry
106482568 CDS
T04298
Symbol
COL20A1
Name
(RefSeq) collagen type XX alpha 1 chain
KO
K24357
collagen type XX alpha
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
NDNF
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
106482568
NCBI-ProteinID:
XP_013795613
UniProt:
A0A8B7ID46
LinkDB
All DBs
Position
Un
AA seq
1481 aa
AA seq
DB search
MWIHTCFFFACLTAVSHVWGRVSSQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKP
MAGDSEQEVMLKTKTPKATVAGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQT
RNNRRNSGTMSEKNLASSGSSAAEHSSVAEATPPPLNAVLTQTAKDRTEKKRQRGSQSKV
SGEVVGNQPSAEASVTEATPTSTKSPQRTPANSGRESLGKEKPTKDSLKRGSQFQCDTSA
MTDIVLLVDGSWSIGRNNFKLIKEFLSTLISPFNIGQDKIRVGLSQYSSDPRTEWDLNTY
TTRDEVLEAMRNLRYKGGNTFTGLALTHVLEQNLKPESGARLEAEKLVILLTDGKSQDDA
NLVAQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGRLTRVLC
TRIKEKRNSENTGSTVKDIPVNSSPQLSPTDLKISAVTSKSMHLTWNPPLRPPKKYRIVY
YPSRGGIHKEVILDGAISSLQLANLTSHTEYLVSVFAIYDTVVGDGLRGITSTLPLSPPR
SLRVSELSHNSMRLSWKAAQGATQYLVLCSAAPRGAEDYTVEVKVAQPEILLDGLSPSTE
YSVAVYAVYGEDASDPASIQETTLALSPPRYLSFSEISHASVRVSWEAASQAVKAHRVTY
VSSRGSNTGEVEVPGTASSAVLRPLSSFTQYFISVRSTYDEGDSSPITGNVTTLKVPPPR
ALKVTELSGNNLQLQWEAVAASDVVVYQIRWSTLSGEKSQELSVAGNVATTVLPSLQKNT
DYKISMWAYYKDGARSDTVSVQHRTNSRSPPTNLFINSETPTSLQVHWKPPDGRIQHYKI
TYSPVSDNSAQQTVMASGKSSSVTLQSLLPDRAYKVTVSAVHNTGESESMSTTGRTGKXI
SHHLCIVRNLSSINPEVMSMGWSCPTMSSPEGSVRGIDMMEAFGLVEKEYASIKGVAMEP
FIFSGSRTYTLFKDTQLTQRTSDVHLFAIPPEHTISILLRLLPETSKEPFAVWQITDEDF
QPLLGVILDSSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYL
DCKKIAEKPINTIGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLRIMCNSLGAEEDRCC
DLPALRDEETCPTLAPACTCTSGLPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQ
VGPEGPSGQQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAK
GVRGLEGTAGPPGPPGPRGFQGVTGSRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSL
ATIYQLVSQACERMIQTHVLKFDSFIHEHARKPVPVWEEKLKPGEPGPPGPPGPPGSNGE
RGENGIPGQPGKDGYPGERGAPGPKGEKGMSGASEEGIQGPRGRTGPPGEIVLGKPGPKG
SPGNAGPQGFPGVRGHPGQPGYPGGCDISGCYGTGRRDFIP
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcacacttgcttcttttttgcctgcctgactgcggtgagtcatgtctggggc
cgagtgagcagccaagggtcaggtcgactgaagctcactgtcctttcggaagacaggctc
caaatgaaatggaaagaaactgaagggaacatcaatggctacaaagttcgggtaaagccc
atggcaggggactcggagcaagaagttatgctgaaaaccaagactcccaaagccacagtt
gcagggctgagccctaccaaggaatacacgttgcaggtctatgtgcttaatggctcccag
gaagccctgtttgccaaaaggaaattcgtaattgaggagctcaaaaatgcatcccagact
agaaataaccgaagaaactcaggaaccatgtcagaaaagaatctcgcttcttcagggagt
tcagcagccgagcatagctcagtggcagaggccactccaccacccctgaatgcagtcttg
acacagacagcaaaggacagaactgaaaagaaaaggcagagagggagtcagtcaaaggtc
tcaggcgaagttgtgggaaaccaacccagtgctgaggccagtgtgacagaagcaacacca
acaagcactaaatcaccgcagcgcactcctgcaaactcaggacgagagtctctaggcaaa
gaaaaacccacaaaggattcattgaagagaggttcccagtttcagtgtgacacatctgca
atgactgatatcgtcctgcttgtggatgggtcttggagcatcggacgcaacaattttaag
ctaattaaagagttcctgagcactttgatttccccattcaatattggccaggacaagata
agagtagggttgtcccagtacagtagcgatccccgcacagaatgggatttgaacacttac
actacgagggacgaggtgctggaggccatgaggaacttgaggtacaagggcggcaacaca
tttacaggcctcgctttgacccatgtcctggaacagaatttaaaaccagaatctggtgcc
cgactggaggcggagaaattggtgatcctcttgactgacggaaaatcccaagatgatgcc
aacctggttgctcagaccttgaaaaacctgggtatagagatatttgccattggggtgaaa
aacgctgatgaggcagagctgaagcaggtggcctcagagccactggagctcacagtgtac
aacgtgctggatttccccttgctgagctctctggttggcaggctcacccgggtcttgtgc
accaggatcaaagagaagaggaacagtgaaaacacaggtagcactgtgaaagatatccct
gtgaactcgagtccccagttgagcccaactgaccttaaaatatcagctgtgacctctaag
agcatgcacttgacctggaatcctcctctgagaccaccaaagaaataccgtattgtgtat
tatccatctaggggtggcatccacaaagaggtgattttagatggagcaatctcctctttg
cagcttgccaacttgacttcacacacagaatatctggtgtcagtgtttgctatttatgac
actgttgtgggagatgggctgagaggcatcacctccacattgcctttgtctcccccccgt
tccctgcgcgtctctgagctgagtcacaacagcatgaggctgagctggaaggcagcacag
ggagctacgcagtacctggtgctctgctcagcagcccccagaggagcagaggactataca
gtggaggtgaaagtggcccagcctgagattctgctagacgggttgtcgcccagcacagag
tactctgttgcggtgtatgcagtgtatggggaagatgcgagtgatccagccagcatccag
gaaaccaccttggccttgagtcctcctagatacctgagtttctccgagatcagccatgca
tctgtcagagtcagctgggaggctgcatctcaggcagtgaaagctcaccgtgtgacctac
gtctctagcagagggagcaacactggggaggttgaggttcctggcactgcatcatccgct
gtcctaagacctttgtcctcgttcacgcagtactttatcagtgtcagatctacatatgat
gaaggcgactcctctccaattactggcaatgttaccacattaaaggtccccccgccgcgt
gcactgaaggttaccgagctctcaggaaacaatcttcaactgcagtgggaagctgtcgct
gcttcagatgtggttgtctatcagatcagatggagtaccctcagtggagagaagtctcag
gagctctctgtcgctggaaatgtggcaaccaccgttctgccaagcttgcagaagaacacg
gactataagatatccatgtgggcctattacaaagatggtgctcgaagtgacacagtttcg
gttcagcacaggacaaattcccggagcccacccaccaacctcttcatcaactctgagacc
cccaccagcctccaggtccactggaaaccccccgatggccgcatacagcactacaaaatc
acctacagccctgtttctgataacagcgctcagcaaacagtaatggcttctggcaaaagc
agcagtgtcaccctgcagtccctgctgcctgaccgagcctacaaggtgactgtttctgct
gtccacaacacaggagagagcgaaagcatgtccacaacaggccgaacaggtaagtgaatc
agtcatcacttgtgcattgttcgtaacctgtcatccatcaatcccgaggtaatgtccatg
gggtggtcctgccccaccatgagctctcctgaaggctctgtacgaggaattgatatgatg
gaagcttttggattagtagagaaggaatatgcctccattaaaggagtagctatggagcca
ttcatattcagcggttcccgtacctacactctgttcaaagatactcagctcacccagaga
accagcgacgtgcacctctttgcaattccacctgagcacaccatcagcatcctgctccgc
ctcctgcccgagacctccaaggaaccctttgctgtgtggcaaataacagatgaggacttc
cagcctctccttggtgttatccttgactccagtaagaaatccttgacctatttcaatcat
gactacaaggctgatttacaggaagtctcctttgaccaacaggaagtgaagaagatattc
tatgggagctttcataaggtgcatgtggcagtgagccatttcaagatcaaactctatctg
gactgtaagaaaatagcagagaaacctatcaacaccattggtagcatctccactgctggc
ttcatcatgctgggaaaagtgacaaggactagaggaccaaggagcgggtcagcatcgttc
cagctgcagtctttgcggattatgtgcaacagtttaggggcagaggaagacagatgctgt
gatcttcctgcattgagggatgaagagacctgccctaccttagctcctgcctgcacttgt
acgtctggcctcccaggcttaccaggacctccagggccccctggcagccctggaaggaga
ggaccacaaggggaacaaggggagccggggcccaagggtgaaccaggtccacctggacaa
gtgggaccagaaggtcctagtggccagcaaggctctccaggttcccaagggatcacggtt
cagggtcctgtgggaccaccaggaattaaaggagagaaaggagacactggaagtcctggc
atgcagggcattcctggtgtgcagggagctccaggcagggatggtcttcaaggtgcaaag
ggggtgagaggactagaaggtacagctgggcctccaggaccacctggaccaaggggtttc
caaggagtgacaggctcccgaggcagcagcggagagaaaggacctccaggtgatgttggg
ccaacagggcttccaggtccaaaaggagaaagaggagagaaaggggaaccacaatccttg
gccacaatttaccagctagttagccaggcttgcgagcggatgattcagactcatgtgttg
aagtttgactcattcattcatgaacatgcaaggaaaccagttcctgtttgggaagaaaaa
ttaaaaccgggagaaccaggaccaccaggtcctccaggtccccctgggagtaatggagaa
agaggagaaaacggcatccccggacagccaggcaaagacggatatcctggagaaagaggt
gcaccagggcccaagggtgaaaaagggatgtctggagccagtgaggaaggaatccaagga
cccagaggcagaacaggcccaccaggagaaatagtgctggggaaaccaggtccaaaggga
tcccctggaaatgctggtcctcaaggtttccctggtgtcagagggcatcctggacagcct
ggatatccagggggttgtgatatctctggatgttatgggacaggtagaagagatttcatc
ccctga
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