Apteryx mantelli mantelli (North Island brown kiwi): 106482642
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Entry
106482642 CDS
T04298
Symbol
CIITA
Name
(RefSeq) class II major histocompatibility complex transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106482642 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aam01001
]
106482642 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aam04054
]
106482642 (CIITA)
Enzymes [BR:
aam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106482642 (CIITA)
Protein kinases [BR:
aam01001
]
Serine/threonine kinases: Other
TAF1 family
106482642 (CIITA)
Pattern recognition receptors [BR:
aam04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106482642 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NB-ARC
AAA
Silic_transp
Motif
Other DBs
NCBI-GeneID:
106482642
NCBI-ProteinID:
XP_013795704
UniProt:
A0A8B7IBX5
LinkDB
All DBs
Position
Un
AA seq
1026 aa
AA seq
DB search
MNLFKEILPRVRNILSSATASDDHALLNLMLKEDVISKEYHQTLLHEKDREDLARKISLT
FVEKRDLYLNALIPLCCLKLYGSKPQNITDNEPRGSKYISDSKRQIMDSAFVSENGYLDL
LHSDIDPLHLYTLFDPTSSGNEESDFSADPEIDTSNYDQFNNMDFLCAMENDENGDESYL
CSNTREAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMAAENTEKFTDMKVQKCHKRT
FLGSAESCSGVSEPKYKKIGSSAHLIPEYLPVSAKGSQQNTDFAAPPQQIINFLIENGTS
NVIIYPVLTSSTETLIPSSFPVSLCGLQVFKEVQVPIVPSEEPFKRPRPVEAFCTSLMDY
FQDTCKFVAMEREVTLDHLFIDGTLVQGQIESKSGKNSVKVMEKELVTCNLQAKEKAALE
RSQIFQIPGGKELETKVIVVLGKAGMGKSIHVQKICQDWSSGEFSLFEFVFWFECKQINM
PEKRYSLKDLLLEFFVKPQEGSNEVFEYILQNPSKVLLVFDGFEGLHDNENSPHCSDSKP
DKEVYSIKELLSGLIQKKILNGCTLLLTARSKDKVSQYVSKVDKTIEIVGFSPQQRELYI
TKYFEGLSYCDKALKLIKDCQYLFSHCYSPVMCRFVCFLCETVLEMGDKDLPSTLTTLFL
KFVQQKLTPMQRDVSPMQNQVNLAMLACIAWYLGEKHQSAMRSDLLPSKEVKEFALKYGF
VLPFAFPKHSDTGEEEFGSTFSNFAIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPY
NWLDLVPRFLAGLLFLQDDPDFCSLLNKDVKQSTKKQKTLLKYIKRLQINDLCPERLLEL
FHCIYETQNNYLLEHVALRLKPELSFLGVVLTPPDVHVLYSILKRSRKEFSLDLQNSSID
MQGLKDLVGLKNVASFRASLRDIIRLWKSLEQTKEYELLRMSTEKFILDPFKAKTMKDIS
DLSDLVEVQKKMISCVQDVSGWNSYEIPAIKNLRKLEFALGQVCGLQGFLKFVGILAAFP
SLQHLE
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttaaggagatcctgcctagagtaaggaatattctctcaagtgctacagct
tctgatgatcatgcattgcttaacctcatgctgaaagaagatgtgatatccaaggagtac
catcaaaccttgctccatgaaaaagacagagaggaccttgcaaggaagatatctctgaca
tttgtggaaaaacgggacctgtatttgaacgctttgattcccctctgttgtttaaaactg
tatggcagtaagcctcaaaacatcacagataatgagccaagaggaagcaagtacatttct
gacagcaagagacaaatcatggattcagcatttgtgtctgaaaatggctatcttgatctg
ctgcacagtgatatcgatccattgcatctgtatactctctttgaccctacatcatctgga
aatgaagaaagtgacttctcagcagatcctgaaattgataccagcaactacgatcagttc
aataacatggatttcctttgtgcaatggaaaatgatgaaaatggggatgaatcgtatctc
tgttccaacacaagggaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatcagcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatg
gctgctgaaaacactgagaaatttactgacatgaaggtgcagaaatgtcacaaacgaacc
ttcttaggctctgcagagagttgctctggtgtttcagaacccaaatacaagaaaattggg
tcttcagcacatttgattccagagtatctgcctgtcagcgcgaaagggagccaacaaaat
acagattttgcagctcctcctcagcagataattaattttcttattgaaaatggcacatca
aatgttataatatatccagtgctgacttcttccactgaaacattgatcccctcaagtttt
ccagttagtttatgtggtttacaagtgttcaaagaagtgcaagttcctatagttccttct
gaagaacctttcaagagaccaaggccagtggaagctttttgtacgtcacttatggattat
ttccaagacacgtgcaaatttgtggccatggagcgtgaagtaactcttgaccatctgttt
attgatggcactcttgttcaaggccaaattgaatccaagagtgggaagaatagtgtaaaa
gtaatggaaaaagagctggtgacttgtaatctgcaagcaaaggaaaaggcagcccttgaa
agaagccaaatatttcaaatcccaggaggtaaagaattagagactaaagtgattgtggtg
ctaggaaaagcaggaatgggaaaaagcattcatgttcagaagatctgccaggactggtcc
agtggagagttttctctgtttgaatttgtcttttggtttgagtgcaaacaaataaacatg
cctgagaagcgatacagcttgaaggatctgcttcttgagttttttgtaaaacctcaagag
ggaagcaatgaggtctttgaatacatactacaaaatccctctaaagtcctgctggttttt
gatggctttgaagggctgcatgataatgagaattctcctcattgctcagacagcaagcct
gacaaagaggtgtacagtataaaggagctactttcaggcctcatccaaaaaaagatactg
aacggttgtactttactacttacagcaagatctaaagacaaggtgagccaatatgtgtcc
aaagtggataagactattgaaatagtaggattctcccctcagcagagagaattatacata
accaaatattttgaaggattatcctactgtgataaggcactgaaattaatcaaagattgt
cagtacctgttcagtcattgttacagccctgttatgtgtagatttgtttgttttctctgc
gagacagtacttgaaatgggagacaaagaccttccttcgactcttactacactcttcctg
aaatttgttcagcaaaagctaacacctatgcaaagagatgtttcgcccatgcaaaatcaa
gtgaatcttgctatgctagcctgtatagcctggtatctaggagaaaagcaccaaagtgcc
atgagaagtgatcttctcccttctaaggaagttaaagaatttgctctgaaatatggattt
gtcctgccatttgcattccccaaacattcagatactggagaagaagaattcgggagcaca
ttctccaattttgccattcagaatttcttgggtgcccttcaccttatgttagcagaagag
atcaaggataaaagcctaacaaagtacctgtcttttccatccaagaagaaaaaaccttat
aactggttagacttagtgcctcgatttttggctggattgttgttcctccaggatgacccc
gacttctgctcccttttgaacaaggatgtaaaacaatcaaccaaaaagcagaaaacactc
ttaaaatatattaaaaggctgcagataaatgacctctgtccagagaggttactggagctt
tttcattgtatttatgaaacacaaaacaactatcttttggaacatgtggccctaagactc
aagccagagctgtcttttctgggtgttgttcttacaccacctgatgtccacgtgctgtac
tctattttaaaaaggtcaagaaaagagttttcgttggatttgcaaaacagcagcattgac
atgcaagggctaaaagacttggttggcctaaagaatgtggcatcattcagggcttccctc
agagatataatcaggctctggaagtctttagaacagacaaaagagtatgaactgctgaga
atgtcaacagagaaatttattcttgatccctttaaggcaaagacgatgaaggacatcagt
gacctttctgaccttgtagaggtgcagaagaagatgatcagttgtgtgcaagatgtatct
ggttggaacagctatgaaattcctgccatcaaaaacctcagaaaactagaatttgcgctg
ggtcaggtgtgtggccttcagggattcctaaaatttgtgggaattcttgcagcatttcca
tcacttcagcatttagagtga
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