Apteryx mantelli mantelli (North Island brown kiwi): 106483694
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Entry
106483694 CDS
T04298
Symbol
DDX3X
Name
(RefSeq) DEAD-box helicase 3, X-linked
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106483694 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106483694 (DDX3X)
03041 Spliceosome [BR:
aam03041
]
106483694 (DDX3X)
03036 Chromosome and associated proteins [BR:
aam03036
]
106483694 (DDX3X)
Enzymes [BR:
aam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106483694 (DDX3X)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106483694 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
106483694 (DDX3X)
Spliceosome [BR:
aam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106483694 (DDX3X)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106483694 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106483694
NCBI-ProteinID:
XP_013797149
UniProt:
A0A8B7IFY2
LinkDB
All DBs
Position
Un
AA seq
652 aa
AA seq
DB search
MSHVAVENALSLDQQFSGLDLNSSDSQSEGSSSSKGRYIPPHLRNREASKQGFDSGGWSS
SRDKDAYSSFGARSDRGAKSSFFDRGNGSRGGRYEERGRGGDYDRSGFGRFDRGGSSRWS
DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMG
EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG
DALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQ
QIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD
TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKR
SFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR
SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER
NINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSG
SGSSSFSSSRSTSSRSGGSSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac
ttgaattcctcagactctcagagtgaaggaagctcttcaagcaaaggcagatacattcct
cctcacttacggaacagggaagcttcaaaacagggttttgatagcggtggctggagctct
agcagagacaaggatgcatacagcagctttggtgcacgttctgaccgtggagcaaaatcg
agcttctttgaccgtggaaatgggtcaagaggaggaaggtatgaagagcgtggaagaggt
ggtgactatgataggagtggctttggtagattcgatcgtggtggaagtagccgctggtct
gacaaatcagatgaagatgactggtcaaagcctcttcccccaagtgaacgcctggaacaa
gagctcttttcaggaagcaatactggcattaactttgagaaatatgatgacattcctgtt
gaagcaacaggcagcaactgtcctccacatattgaaagtttcagcgatgttgacatggga
gaaattattatgggaaacattgagctcacacgatacacccgtcctactccagtccagaaa
catgcaatacctattattaaagaaaagagagacttgatggcctgtgctcagacaggttct
ggaaaaacggctgcatttcttctaccaatattgagccagatctatgcagatggccctggt
gatgccttgagagctatgaaggaaaatggaaggtatggacgtcgtaagcaatatccaatc
tcgctggtcttggctccaactagagaactggctgtccagatctatgaggaagccagaaag
ttcgcataccgttccagagttcgtccctgtgttgtatatggtggtgcagacattggtcag
cagatacgtgacttagaacgtggatgtcacttgcttgtggcaactccaggacgactggtt
gatatgatggagaggggaaagattggactggatttctgcaagtacctagtgctagatgaa
gctgacagaatgcttgatatggggtttgaacctcaaattcgtcgaattgttgaacaagat
actatgccaccaaaaggggttcgtcataccatgatgttcagtgctactttccccaaggaa
atccagatgcttgctcgtgacttccttgatgaatatatctttctggctgttggcagagtg
ggctctacatctgagaacatcacacagaaagtggtgtgggtggaagagtcagacaaacgg
tcatttctgcttgatttgctaaatgccacaggcaaagattccttgactctggtgtttgtg
gaaaccaaaaagggtgcagatgctctggaggacttcctctaccatgaagggtatgcctgt
acaagtatacatggagatcgttctcaaagagacagagaggaagcgctgcaccagttccgt
tcgggcaagagcccaattcttgttgctacagcagtagcagcaagaggactggatatctca
aatgtaaagcatgtcataaactttgacttgccaagtgatattgaagagtatgtacatcgt
attggtcgtacaggccgtgtagggaaccttggccttgccacctcattcttcaatgagagg
aatataaacatcaccaaggacttgcttgatcttcttgttgaagctaagcaagaagtacca
tcttggctggaaaacatggcttatgaacagcatcacaaagggggtggcagccgcgggcga
tctaagagcagtaggttcagtggaggatttggcgccagagactatcgaacaagtagcggt
tctggcagcagtagctttagtagcagtcgatcaactagcagccgcagtggaggaagtagc
agcagaggatttggaggtggtggctatggaggcttctacaacagcgatggatatggagga
aactacaactcccagggggttgactggtggggcaactga
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