Apteryx mantelli mantelli (North Island brown kiwi): 106483819
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Entry
106483819 CDS
T04298
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam02010
ABC transporters
aam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106483819
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106483819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aam02000
]
106483819
Transporters [BR:
aam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106483819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
106483819
NCBI-ProteinID:
XP_013797305
LinkDB
All DBs
Position
Un
AA seq
1888 aa
AA seq
DB search
LLSMKSWSDMRQEVMFLTNVNASSSSTQTYQAMSRIVCGHPEGGGLKIKSLNWYEDNNYK
ALFGDNSTEDDITNFYDNSTMEDVARFLSKHPEEFKTANGSVYTWVDALNETNWAIQTIS
RFMECVNLDKLEPVATEVQLISKSLELLGERRFWAGIIFTEITPNSIDLPHHVKYKIRMD
IDNVERTNKIKDGYWDPGPWADPFEDMRYVWGGFAYLQDVVEQAIIRVQTGTEKTTGVYV
QQMPYPCYVDDMFLRVMSHSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNG
ILWLSWFISSLIPLLMSAALLVLILRMGKLLPYSDPSMVFVFLSIFAVMTILQCFLISTA
FSRANLAAACGGIVYFMLYLPYVLCVAWQDHVSFSLKIFASLLSPVAFGFGCEYFVLLEE
QGVGVQWDNFFERPLEEDGFSITTSAIMMMFDTFLYGVMTWYIESIFPGQYGIPRPWYFP
FTKSYWFGEESQDRQHPHPDQKGPSKVCKEEEPMHXXXXXXXXXXXXXXSIQNLVKVYSD
DKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTLGTAFILGKDILSELST
IRQNLGVCPQHNVLFDLLTVEEHIWFYACLKGLSEKKVKEEMEQMAMDVSLPLKLKARTS
KLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHM
DEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLGSYQNSSSTVSY
LKKDDSVSQSSSDAGLGSDHESNTLTIDVSAISNLIRKHVPEARLVEDIGHELTYVLPYE
AAREGAFVELFHEINDRLSDLSISSYGISETTLEEIFLKVVDDSGVDAETSNGTLPARRN
RHVFGDRQSCLRPFTEDDAFDPNDSETDPESRQTDHFSRMDGKGSYQMKGWKLIQQQFMA
LLWKRPLIAKRSKKGFFAQVRIDALIVCIALMFSLIIPPFGKYPSLELQPWMYDEQYTFI
SNDAPDDAGTQKLLAALLNEPGFGTRCTQGYSIPDTPCTVGQKEWTTASVSDSILDILKG
NWSMENPSLSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNLTGHNISDYLVKT
YAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHKVTDAIKQVKKVLELAQGGSGDR
FPNSLASFMKGLDTKNNVKVWFNNKGWHAIVSFLNVINDAILRANLQQGKNPSVYGITAF
NHPLNLTKQQISEVALMTTSVDVLVSICVIFAMSFIPASFVVFLIQERVSKAKHLQFISG
VKPVVYWLANFVWDMCNYVVPAMLVIVIFICFQQKSYVSSSNLPVLALLLLLYGWSITPL
MYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELLSXQKLNNINDILKSLFLIFPH
FCLGRGLIDMVKNQAVADALERFGKIIVSPLSWDLVGQNLFAMAVEGVVFFLITVLIQYR
FFIKLRPVYAKLPPVNDEDEDVNRERQRIISRGGQSDILEIKELTKIYRRKQKPAVDRIC
VGIPPGECFGLLGVNGAGKSSTFKMLTGSTDVTGGEAFLKGNSILSNIQEVHQNMGYCLQ
FDAVNERLTGREHLEFFALLRGVPEKEVCKVSEWAIRKLGLVKYGEKCVGNYSGGNRRKL
STAIALIGGPPVVFLDEPTTGMDPKARHFXXNCALSVIKEGRSVVLTSHGMEECEALCTR
MAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFGLAFPGSALKEKHR
NMLQYQLPSSPSSLARIFSILSQNKERLHIEDYSVSQTTLDQVFVNFAKDQSDDDHTKDL
SLHKKQTVVDITILNSFLQDEKVKESCV
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
ttgctcagcatgaagagctggagtgacatgaggcaagaggtgatgttcctgaccaatgtg
aatgcctcaagctcctctacacagacttaccaggctatgtcacgcattgtgtgtggccat
cctgaaggtggagggctcaaaatcaagtccctcaactggtatgaggacaataactacaaa
gcgctctttggagacaacagcactgaagatgacataactaatttctacgataactccaca
atggaggatgttgcccgtttcctgtcaaagcacccggaggagtttaagacagcaaatggc
tcagtgtatacctgggtggatgccctcaatgagacaaactgggctattcagaccatctcc
cgcttcatggagtgtgtcaatctggacaaactggagcctgtggccacagaagtacagctt
ataagcaagtccttggaactgctgggtgaaaggagattctgggctggcatcattttcact
gaaatcactccaaacagcatagacctccctcatcacgtcaaatacaaaatacgcatggac
atagataatgtggaaaggaccaacaagatcaaggatgggtactgggaccccggtccctgg
gctgacccctttgaggacatgcgctatgtttggggaggctttgcttacctgcaggacgtg
gtggaacaggccatcatcagggtgcagacaggcacagagaagacaacaggggtttatgtg
cagcagatgccctacccatgttatgtggatgacatgtttctgcgtgtcatgagccactca
atgcccctcttcatgactttggcctggatctactcagtggctgtgataatcaagggcatt
gtgtatgagaaggaagcccggctgaaggaaacgatgaggattatgggactagacaatggc
atcctatggctgagctggttcattagcagcctcatccctctcctgatgagcgcagccctg
ctggtgctgatcctcaggatggggaaactgctgccttacagtgatcctagcatggtgttt
gttttcctctcgatctttgccgttatgaccatcctccagtgcttcctcatcagcactgca
ttctccagggccaacctggcagctgcctgcgggggcattgtctatttcatgctgtaccta
ccctacgtgctgtgtgttgcctggcaggaccatgtcagcttctcactcaagatctttgcg
agcctgctgtccccagtagcctttggctttggctgtgagtactttgtactgcttgaggag
cagggagttggtgttcagtgggacaacttcttcgagaggcctctggaagaagatggcttc
agcatcaccacatctgccatcatgatgatgtttgatactttcctatatggggtcatgacc
tggtacattgagtctatcttcccaggccaatatggcattccaagaccctggtacttcccc
ttcacaaagtcgtattggtttggtgaggaatcacaggacaggcagcaccctcatcctgac
cagaaggggccttcgaaagtctgcaaggaggaggagcccatgcattnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnttccatccagaatctggtcaaggtttatagtgat
gacaagaaagttgctgtagatggtctcacactgaacttctatgaagggcagatcacttcc
tttctgggacataacggagctgggaaaaccactaccatgtccatcttgactggcttgttt
cctccaaccttgggtacagccttcatcctgggcaaagatatcctctctgagcttagcacc
attaggcagaaccttggtgtctgtccacagcacaatgtgctgtttgacttgctgactgtg
gaagagcacatctggttctatgcttgtctcaaagggttgtcagaaaagaaggtgaaagag
gaaatggagcagatggcaatggatgttagtttgcctctcaaactcaaagctagaacaagc
aaactctctggtggcatgcagaggaagctctcagtagccttggcctttgttggtggctcc
aaggttgtcattctggatgagcccacagctggggtggatccttattctcgcagagggata
tgggaactgctgctgaagtatagacaaggccgcacgatcattctctccacgcatcacatg
gatgaggcagacattctgggggaccggattgccattatttctcatggcaagctgtgctgt
gttggttcctctctattcctgaagaaccagctaggaacaggctattatttgaccctggtc
aagaaggatgtggattcctctctgggctcctaccagaacagcagcagcacagtgtcttat
ctgaaaaaggatgacagtgtctctcagagcagttctgatgctggccttggcagtgaccat
gaaagcaacactttaacaatagatgtttctgcaatttctaacctcattaggaaacacgtt
cctgaggccaggctggtggaggatattggccatgagttaacctacgtcttgccatatgaa
gctgctagagagggagcttttgtggagctgttccatgaaatcaatgaccgcctttccgat
ctcagcatttccagctatggcatctctgaaaccaccctggaggaaatcttcctcaaggtg
gttgatgacagtggtgtggatgcagaaacctcaaatgggacactaccagccagaaggaat
aggcatgtgtttggagacagacagagctgccttcgcccattcacagaagatgatgctttt
gaccctaatgattcagagacagatccagaatccagacagacagaccacttcagcaggatg
gatggtaaaggctcctaccagatgaaaggctggaagctcatccagcagcagttcatggct
ctgttgtggaagaggccgcttatcgctaagcgaagcaagaagggcttctttgctcaggtg
agaatagatgccttgattgtgtgtattgctctcatgttcagcctgatcattcctcccttt
gggaagtaccccagcctggaattacagccctggatgtatgatgagcagtacacttttatc
agcaatgatgctccagatgatgcaggcactcagaagcttttggctgcacttctaaatgag
cctggctttgggacacgctgtacgcagggatactccatcccagacactccttgcactgtt
gggcagaaggaatggactactgcctcagtctcagactcaatcctggacatcttgaaaggc
aactggagcatggagaacccttccctgtcttgtgagtgcagcaatgagaagatcaagaag
atgctgcctgtgtgtccccctggtgcaggtgggctgccacccccacagagagaacaagac
actgctgacatcctccagaacctgacaggccacaacatatcagactatctagtgaagacc
tatgcacagatcattgggaaaagcttaaagaataagatctgggtgaatgagttcaggtat
ggtggcttttccctgggagccagcagttccctcatgcttcctcctagccacaaagtcact
gatgccatcaaacaagtgaagaaagtcttggagctagcacaggggggttctggagatcgg
tttcccaacagcttggcaagcttcatgaaaggcctggatacaaagaacaatgtgaaggtg
tggttcaacaacaagggctggcatgccattgtctccttcctgaatgtgataaacgatgcc
atccttcgggccaacctgcagcagggcaagaaccccagtgtttatggcatcactgccttc
aatcacccactcaacctcaccaagcagcagatctctgaagtggccctaatgaccacctct
gtggatgtcttagtctccatctgcgtgatctttgccatgtccttcatccctgccagcttt
gtggtcttcctcatccaggagcgggtcagcaaggccaaacacttacagttcatcagtggt
gtaaagcctgtggtctactggctggccaactttgtctgggatatgtgcaactatgttgtt
ccagccatgctagtcattgtcatcttcatctgcttccagcagaagtcctatgtgtcctcc
tccaacctgcctgtgctggcccttcttctgcttctctatggatggtctatcacccctctc
atgtatccagcatcctttgtgttcaaaatccccagcactgcatacgtcgtgctgaccagt
gtgaacctcttcattggcatcaatggtagtgtggctacctttgtcctggagcttttgtct
tgacagaagctgaacaacatcaatgacattctgaagtctctcttcctcatcttcccccac
ttctgccttgggcggggactcattgacatggtgaaaaaccaggccgtggctgatgctctg
gagaggtttggtaaaatcattgtgtcccctctgtcatgggatttggtggggcagaacctc
tttgccatggcagtggagggtgtagtcttcttcctcatcactgtgctcatccagtacagg
ttcttcatcaagctcaggcctgtctatgccaagttgccccctgtgaatgatgaagatgag
gatgtaaacagagagagacagaggataatcagcagaggaggacaaagtgatattttggaa
atcaaagaactaaccaagatttacagaaggaagcaaaagccagcagttgataggatctgt
gttggaattcctcctggagaatgctttggcctcctgggagtgaatggtgctggcaagtca
tctactttcaagatgctaactggtagtacagatgtgacagggggagaagctttcctcaaa
ggaaacagtatcttgtccaacatccaagaagtccatcagaacatgggctattgcctgcag
tttgatgctgttaatgaacggctgacagggcgagaacatctggagttctttgcacttttg
agaggtgttccagagaaagaagtctgcaaggttagcgaatgggcaatccgaaaactgggc
cttgtcaaatatggagaaaaatgtgtggggaactacagtggagggaacagacgcaagctc
tccacagctattgctcttattggggggccacctgtggtgttcctggatgagccaacaaca
ggaatggatcccaaagcacgtcatttcnnnnggaactgtgctctgagtgtcatcaaggag
gggagatcagtggttctcacatctcacggcatggaagaatgtgaagccctgtgcactcgt
atggcaataatggtcaatgggcggttcaggtgtctgggcagtgtccagcatttaaagaac
aggtttggagatggctataccatagtggtgcgaatcgcaggggcaaacccagacctgaag
ccagttgaggaattctttgggcttgccttccctggaagtgccctgaaggaaaagcatcga
aatatgttgcagtaccagcttccctcttcaccatcttccctggccagaatatttagcatc
ctctcccagaacaaagagagactccacattgaagactattctgtttctcagactacactt
gaccaagtatttgtaaattttgctaaggaccaaagtgacgatgaccacactaaggacctg
tcactgcacaaaaaacaaactgttgtggacattacaatccttaattcctttctgcaagat
gagaaggtgaaagaaagttgtgtgtga
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