Apteryx mantelli mantelli (North Island brown kiwi): 106484259
Help
Entry
106484259 CDS
T04298
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106484259 (PTBP1)
03041 Spliceosome [BR:
aam03041
]
106484259 (PTBP1)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106484259 (PTBP1)
Spliceosome [BR:
aam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106484259 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
106484259
NCBI-ProteinID:
XP_013797860
UniProt:
A0A8B7IG36
LinkDB
All DBs
Position
Un
AA seq
561 aa
AA seq
DB search
MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSRV
IHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPV
LRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAP
GIISASPYAGAGFPPTFAIPQAAGTVFRLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPG
LTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLA
MSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIF
PPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLID
LHNHDLGENHHLRVSFSKSTI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcggggatctgacgagcttttc
tctacttgtgttactaacggaccctttatcatgagcagcaactcttcttctgcagctaat
ggaaacgacagcaaaaaattcaaaggtgatagtagaagcgctggggtcccatctcgagta
atccacgtccgtaaactccccagtgacgtcacggaggcagaggtcatttctttgggctta
ccttttggcaaggtcaccaatcttctaatgttgaaaggaaaaaatcaggctttcatagaa
atgaatacggaggaggcagccaacaccatggtgaactactataccacagtcactccagtc
cttcgaagccagcccatctacattcagttctccaaccacaaggagctcaaaacggacaac
tctccaaaccaagcacgtgcccaagcagctctgcaagcggtgaattctgttcagtccgga
aacctagcgctgtcagcctctgcagcagcagtagatgcagggatggcaatggctggccag
agccctgtcctgaggatcattgttgagaatctcttctatcccgtcactctagatgttctg
catcagattttttccaagtttggtacagtcttgaaaataattacgttcacaaagaacaac
caatttcaggccctgctacaatatgctgacccagtgagtgctcagcatgccaaactgtct
ttagatggacagaatatctacaatgcctgttgtacactgcgcatagatttctcaaagctc
acaagtctcaatgtaaaatataacaatgataagagcagagattatacacggccagaccta
ccttctggggataaccagccctctcttgatcagaccatggcagctgcttttggtgcccca
ggaataatttctgcctctccgtatgcaggagctggctttcctcctacctttgcaattcct
caggctgcaggtactgtatttcgcttgtcagttccaaatgttcatggagcactagctcct
ttggctatcccatcagcagcagctgcagcggctgcagcaggacggattgccattcccggc
ctcactggggcagggaactctgttctgctggttagcaatctgaatcctgagagagttaca
ccccaatgcctctttattcttttcggagtctatggtgatgtgcagagggtgaagatttta
tttaataagaaagagaacgccctagttcagatggctgatggaaaccaggctcagcttgcc
atgagtcatttaaatggtcagaagcttcatgggaagccaatccgtataacgctgtccaag
catcagacagtacaacttcctcgtgaggggcaggaagaccaaggcctgactaaggattat
ggaaattctcctctgcatcgtttcaagaaaccaggctccaaaaatttccaaaacatcttc
cccccttctgccactcttcatctgtccaatattccaccttcaataactgaagaagacctc
aagatgctattttcaagcaatggtgggatggtcaaaggattcaaattcttccagaaggac
cgtaaaatggctctgatccagatgggctctgtggaagaagctattcaatcgctcattgac
ctccataatcatgaccttggggagaatcatcacctgcgtgtgtccttctcgaagtccacc
atttaa
DBGET
integrated database retrieval system
