KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106484462
Entry
106484462         CDS       T04298                                 
Symbol
WDR33
Name
(RefSeq) WD repeat domain 33
  KO
K15542  polyadenylation factor subunit 2
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aam00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106484462 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aam03019]
    106484462 (WDR33)
Messenger RNA biogenesis [BR:aam03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     106484462 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd ASA1 Beta-prop_WDR90_POC16_2nd DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st CFAP251_N Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Collagen Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 106484462
NCBI-ProteinID: XP_013798115
LinkDB
Position
Un
AA seq 1324 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGAGPQGFMGPQGP
PGPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQTHLG
PQGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGL
NPRGMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTML
GPPQELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLL
GDGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHSQGPGLNKGDSRGPPNHHMGPLSD
RRHDQNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHP
DKRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSD
DRYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDTFDSPDENARG
RDHGVRGRGRGTLRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPA
NRERSSSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEERGKGRGSSGPSQRVPK
SGRSSSLDGDHHDGFHRDEAFGGGPTGGNNPSRGGRSGSNWGRGSNMNSGQSRRGASRGG
GRGR
NT seq 3975 nt   +upstreamnt  +downstreamnt
atggccacagaaattggctccccaccccgttttttccacatgccgaggttccagcaccag
gcgcctcggcagctgttctacaaaagacccgattttgcacagcagcaagcaatgcaacag
cttactttcgatggaaagcggatgagaaaagccgtgaaccgaaaaaccatagattacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgatttggtcccgcctataggaatgttgaac
aaccccatgaatgctgtaacaacaaaatttgttcggacatctactaataaagtaaaatgc
cccgtatttgttgtcaggtggactcctgaagggaggcgcttggttactggggcatctagt
ggagagttcaccttgtggaatggactgactttcaattttgaaacgatattacaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacacggagcagatgtgaagtgtgttgactggcatccaacgaagggattggttgtg
tcgggaagtaaagatagccaacagccgataaagttctgggatccaaagaccggccagagc
cttgccacactacatgctcataaaaacacagtgatggaggtaaaattgaacctgaatgga
aactggcttctaacggcttctcgtgaccacctctgcaagctctttgacattcgtaatctg
aaagaagaacttcaagtcttcaggggtcataagaaagaggccacagctgttgcctggcat
cctgttcatgaagggctgtttgccagcggagggtctgatggctctttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccacgagggaatgatctggagt
ctggcatggcatccccttggacacattctctgttcaggctcaaatgatcacaccagcaag
ttttggactcgaaatcggcctggagataaaatgcgagatcgttacaacttgaatctgctg
cctggcatgtcagaggacggtgtggaatatgctccaggagatgatcttgaacccaacagc
ctagcggttattcctgggatgggaatacctgagcaattgaaaatagccatggagcaagag
cagatgggaaaagatgagtccaatgatattgaaatgacaatcccaggattggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaggtgccacagaaaaaagtgccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcagaataaagtccctttgcctccc
ccacctgagccattaaatgatagaaaggaagatattaaactggaggagaaaaagaagaca
caggcggagatcgaacaggaaatggcagcacttcagtatacaaacccgcaactcttggag
caactgaagattgagagactcgcacaaaagcaagctgagcaagtgcagccaccacctcca
ggaggctctcttcacggaccccagccttttccagggcaaggcccaatgtcacagatgcct
caaggatttcagcagcccctcccacctcagcagatgccaatgaatatgcctcaaatggga
cctcctggtccacaaggacagttcagacctccgggaccccaaggacaaatgggacctcaa
ggtcctccgttacaccaaggcggtgcaggtccacaagggttcatgggaccacaaggacct
ccaggcccccaaggacctccacaaggaatgccacggcctcaggatttacatgggcatcaa
ggaatgcagagacatcctggccctcatgggccaatggggcctccaggtccacagggtagt
gctggcccacaaggccacttaggaccacaaggcctacctggatctcagactcacttagga
ccgcagggtccacctggcccacaaggtcacttgggtcctcaaggtcctccgggtggtcaa
ggaatgcaagggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaa
ggagctccaggatctcaagggatgcaaggtcctatatctcaagggcctttgatgggactt
aatccaagagggatgcagggtccaccagggcccagagataaccagggacctactccacaa
gggatgatgatgggtcatccgcaagaaatgagaggtcctcatatgcagagtggtttacta
ggacatggtccccaagagatgaggggcctacagggacccccgcctcaaggtacaatgtta
ggaccgccacaagaattgcgtgggccaccaggtccacaaggccagcagggacctccacaa
ggctctttagtagggcctcaaggaaacatgcaaggacctcagggacagccaaacccttca
agggggccacatccttcccagggccctctacctttccagcagcagaaaactcctttgctg
ggtgatgggcctcgtcccccatttaatcaggacggacagaacccaggtcctccaccattg
ataccaggactggggcagcagggaggacaaggtcgtctcggccctcacagccaaggacct
ggccttaataaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagat
agaaggcacgaccagaacagtggtggtcctgatcatgggcctgagagagggttgtttcga
ggtggccaggagtggggtgatggtagagacagcaggggcatgccagatagacgaggacct
cacccagatttccatgatgactttgatcgaccagatgacttccgtgacgacttccatccg
gataagagatttggccatcgattacgggaatttgaggggagaggaggcccgccattacaa
gatgaaaaatggagacgcggtggacctgggcctccctttcctcctgatcacagggaattt
gaaggagggggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccgtcagat
gatagatatccacgggatcctgaggatgcacggttccggggaagacgcgatgagagcttc
agaagaggaggaccctcaagacacgagggccggggacccagggggagagatggctttcct
ggtcctgaagattttgggccagatgacacttttgactctccagatgaaaacgcaagagga
agggaccatggtgttcgggggcgaggtcgcggtactcttagaggagcccggaagggtctg
cttcctactccagatgaatttccacgctttgaaggagggcggaaaccagaatcctgggat
ggaaacagagaaccaggtcctcgtccagatcaccctcctcatgacggacactctccagct
aaccgagaacgttcttcttcgctccagggcatggacatggcctcactaccaccacgcaaa
cggccctggcatgatggaccagggacctctgaccacagagaaatggatgctccaggtgga
cctccagaggagagagggaaaggacgaggaagttcgggaccttcacagagagtgccaaaa
tctgggaggtctagttctttagatggagaccatcacgatggattccacagggatgaagct
ttcggtggaggccctacaggaggcaataacccctctagaggaggaaggagtgggagtaat
tggggaagaggaagtaacatgaactctggtcaatcaagaagaggagcatctaggggtggt
ggaagaggacgatag

DBGET integrated database retrieval system