Apteryx mantelli mantelli (North Island brown kiwi): 106485295
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Entry
106485295 CDS
T04298
Name
(RefSeq) uncharacterized LOC106485295
KO
K12880
THO complex subunit 3
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03013
Nucleocytoplasmic transport
aam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106485295
09122 Translation
03013 Nucleocytoplasmic transport
106485295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106485295
03041 Spliceosome [BR:
aam03041
]
106485295
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106485295
Spliceosome [BR:
aam03041
]
Complex C
Other components
EJC/TREX
106485295
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106485295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
B-prop_COPA_B_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Tricorn_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
RMC1_N
eIF2A
Beta-prop_Nup120_160
PD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Peptidase_S9_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
106485295
NCBI-ProteinID:
XP_013799087
LinkDB
All DBs
Position
Un
AA seq
263 aa
AA seq
DB search
MAQSKRHTYSRAPLVKFRLTNSPAGSQASLLLLKEVTLAAGRRRAVSEGVIFANCIKYRN
IRGTVSLISAASLLEASPLGSAADGAVQAALAPRSDRESVRLRCGRDRRAALPCSPRPTA
ALCRQVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN
INICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNG
CINILRGWGPAPQRFPXGCINIL
NT seq
791 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagagacacacgtacagtcgggcaccgcttgttaaattccggctgacg
aacagccctgcgggttcccaagcttccttgctcctgctgaaggaggtgacgctcgctgca
ggcaggcgccgtgccgttagtgaaggtgttatctttgcgaattgtataaaatacagaaat
atccggggaaccgtcagcttaatttctgcagcgagcctcctcgaggcctcccctctgggc
tctgcagctgatggcgcagtacaagcggcccttgctccgcgctcggatcgggagagcgtg
cggctccgctgcggccgcgaccgccgcgccgccctgccctgctccccgcggcccaccgcc
gccctctgccgccaggtgaaggagaacaactaccgcggccacggcgacagcgtggaccag
ctctgctggcaccccagcaaccccgacctcttcgtcacggcgtccggcgacaagaccatc
cgcatctgggacgtccgcaccaccaagtgcatcgccaccgtcaacaccaaaggggagaac
ataaacatctgctggagccctgatggccagaccattgcagtagggaacaaggatgacgtt
gtcactttcattgatgccaagacacatcgttccaaagctgaggagcagttcaagtttgag
gtgaatgagatctcctggaacaacgataacaacatgttcttcctcactaacgggaatggc
tgcatcaatatcctcaggggctggggtcctgcaccccagcgtttcccagncggctgcatc
aatatcctcag
DBGET
integrated database retrieval system
