Apteryx mantelli mantelli (North Island brown kiwi): 106485318
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Entry
106485318 CDS
T04298
Symbol
VPS16
Name
(RefSeq) VPS16, CORVET/HOPS core subunit
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04140
Autophagy - animal
aam04148
Efferocytosis
aam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106485318 (VPS16)
04148 Efferocytosis
106485318 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106485318 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aam04131
]
106485318 (VPS16)
Membrane trafficking [BR:
aam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106485318 (VPS16)
Hops complex
106485318 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
106485318
NCBI-ProteinID:
XP_013799110
UniProt:
A0A8B7IJQ2
LinkDB
All DBs
Position
Un
AA seq
811 aa
AA seq
DB search
WPGGSAPSTAPRPCPCGRRKFELYAMEWSLKEDLRDCLVAAAPYGGPIALLKNSGRKEKS
PSARPLLEIYSASGLLLAGIPWKSGQLVHLGWTASEDLLCIQEDGTVLIYNLFCEFKRHF
SMGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLTTNIDDLKLRRMPEVPGLQKPPSC
WAVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPAAGAYLRMAVSFNYRCLALFTD
TGYIWMXRLCPCCSEPCSEEPGTQASCSLLLSGLLRAVRRDPVPGTPGXGLAECCPLPSA
RWAEQRERGERGGPCSCWETSAPGSXGLPVGSASLXKESQKADEYLREIKDQKLLPEAVS
QCIEAAGYEHEPETQKSLLRAASFGKCFIDKFPPESFVRMCQDLRVLNAIRDYQIGIPLT
FTQYPLWDGLVLRRLYPLAIRICEYLRLSEIQGVSRILAHWACYKVQQKDKSDEEVAHAI
NQKLGDTPGISYSEIAARAYDCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIE
SGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVALSLYRQFCKHQERKTLKDLYNQDDNHQ
ELGNFHVHSSYSEQRIEGRVGALQNAVDAYYKAKNEFAAKATEDQIKLLRLQRHLQEDFD
KPYLDLSLHDTVSNLILDGHHKRAEQLYREFKIPDKRYWWLKISALATRGDWEEMEKFSK
SKKSPIGYLPFVEISVKHHNRYEAKKYAPRVTPEQRVKAFILVGDLDQAADAAIEHKNEN
EMNFVLSKCTASTDVAVVEKLNRARAQLLKK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
tggccggggggctcggcgccatccacagccccccgcccgtgtccgtgcggccgcaggaag
ttcgagctgtacgccatggagtggagcctgaaggaggacctgcgggactgcctggtggcg
gccgccccgtacggggggcccatagctttgctgaagaacagcggcaggaaggagaagtct
cccagcgcccgcccgctgctggagatctactcggcctcggggctgctcctggccggcatc
ccgtggaagagcggccagctggtgcacctgggctggacggccagcgaggacctgctgtgc
atccaggaggacggcaccgttctcatctacaacctcttctgcgagttcaagcgtcacttc
agcatgggcaacgaggtgctgcagaaccacgtgctggaggcgaaggtcttccacacagag
tacggcaccggcgtggccatcctcaccggggcgcaccgcttctccctgaccaccaacatc
gatgacctgaagctgcgcaggatgcccgaggtgccaggtctgcagaagccgccctcctgc
tgggccgtgctctcccaggacagggtgaccatcgtcttgctggcggttggccaggatctc
tacctgctggacaacacatcctgctccgtggtgaccccacctggcatgagccccgctgct
ggggcctatctgcggatggccgtgtccttcaactaccgctgcctggcgctcttcaccgac
acgggctacatctggatgncgcggttgtgtccctgctgctccgagccctgttcggaggag
ccgggcacccaggcttcgtgctcgctgctgctctccggtctcctgcgggctgtgcgcagg
gatccagtcccagggacgccggggtgagggctcgctgagtgctgcccactacccagcgcc
cgctgggcagagcagagggagcgtggggagcgaggcggtccgtgctcctgctgggagaca
tcagctcccggatcctgaggtctccctgtgggctctgcttccctgtagaaggagagtcag
aaggcagacgagtacctgcgggagatcaaggaccagaagttgcttccggaggcagtgagc
cagtgcatcgaggcagccggctacgagcatgagcctgaaacccagaagtccctgctcagg
gccgcctcctttgggaagtgcttcatcgacaagtttcccccggagagcttcgtgcgcatg
tgccaggacctgcgggtgctcaacgccatccgggactatcagatcggcatccccctcacc
ttcacccagtatcctctgtgggacgggctggttctgcggcggctctaccccctggccatc
aggatctgcgagtacctgcgcctctcggagatccagggcgtcagccggatcctggcgcac
tgggcctgctacaaggtgcagcagaaggacaagtcggatgaggaggtggcccacgccatc
aaccagaagctgggtgacacgccaggcatctcgtactccgaaatcgccgcccgggcttac
gactgcggcaggacggagctggccatcaagctgctggagtacgagccgcgctccggggag
caggtcccgctgctgctgaagatgaagcggagcaagctggccctgagcaaagccatcgag
agcggggacacggacctggtctacactgtcgtgctccatctgaagaacgaactgaaccgc
ggcactttcttcatgacgctgcagaaccagccggtggccctgagcctgtaccgccagttc
tgcaagcaccaggagcggaagacgctgaaggacctgtataaccaggacgataatcaccag
gaactcggcaacttccacgtccactccagctactcggagcagcgcatcgaggggagagta
ggggctctgcagaacgccgtggacgcgtactacaaagccaagaacgagtttgctgccaag
gccacagaggatcagatcaagctcttgcggctccagcgacatctccaggaggacttcgac
aagccctaccttgacctctcacttcatgacaccgtctccaacctgatcctggacggccac
cacaagcgggccgagcagctgtaccgggagttcaagatccccgacaagcggtactggtgg
ctgaagatcagcgccctggccacccgcggagactgggaggaaatggagaagttctccaag
agcaagaagtcgcccatcgggtacctgcccttcgtggagatctccgtgaagcaccacaac
cgctacgaggccaagaagtacgctccccgcgtgaccccggagcagcgagtcaaggccttc
atcctggtgggggacctggaccaagcggccgacgctgccatcgagcacaagaacgagaac
gagatgaactttgtcctgtccaagtgcaccgccagcaccgacgtcgccgtggtggagaag
ctgaaccgggccagagcccagctcctgaagaagtga
DBGET
integrated database retrieval system
