Apteryx mantelli mantelli (North Island brown kiwi): 106485346
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Entry
106485346 CDS
T04298
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106485346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106485346
03041 Spliceosome [BR:
aam03041
]
106485346
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106485346
Spliceosome [BR:
aam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106485346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
106485346
NCBI-ProteinID:
XP_013799136
UniProt:
A0A8B7IJW1
LinkDB
All DBs
Position
Un
AA seq
869 aa
AA seq
DB search
MNKLKQNQEYVAFQCERSRLLLARRNQLLLEFSFWNEPLPRRGPHVYELRTYKLKASEID
ERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEIT
KCLEFKSKHEEIELVSLEEFYREAPPEISSRSPVREPPRAWDDQAGAVLETRRFASRGAS
GGFFFALQDARYYSEEGEVDLRDPIKDYELYKETCQELQRLMAEIQELKSKGVKDNASEI
DERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEI
TKCLEFNSTWLLSLLRAQHWAELRVALPVCFPALISSSLSLFALGLGRAPCLSVSELPWF
LQQRFGSGELGPRKAPSGSRTCSVTAMCGGNPSPIPRLAEKYKECLANKEKILKEIEVKK
EYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYEIARHLPPPLYVLFVQASAYGQACD
KKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKR
HPLSVTVDLKCKDENVLHLTFYYLMNLNVMTNVLHLTFYYLMNLNVMTVKTKVTTAVELT
TPISAGDLLSPDSLLSCLYPGDHGKKTPNPANQFQFDKVGCVSPDSACADNSLSASHMEM
TVKLLRTRLQSRLALHKQFASLEHGVVPVSSECQHLFPSKIVSRLVKWAAIPYEDYAELP
YTRDVLEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPIFSLCLNWKGERTSSN
DDNIRAMESEVNVSYKELWGPKPGYQLLTNQLQRLCMVLDVYLETESHDTSVEGPKEFPQ
EKMCLRLVRGPTRMKPFKFNYPQGFFSHR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctgaagcagaaccaggagtacgtggccttccagtgcgagcgcagccgcctg
ctgctcgcccgccgcaaccagctgctgctcgagttcagcttctggaacgagcccctgccc
cggcgcggcccccacgtctacgagctgaggacctacaaactcaaggcttccgagatagac
gagcggcgcattcagagctgcgtccacttcatgaccctcaagaaactcaaccgcttggct
cacatccggctgaagaaaggaagagatcagacccacgaggcaaagcagaaggtggacgcg
tatcacctgcagctccagaacctgctctacgaggtgatgcacctgcagaaagagatcacc
aagtgcctggagttcaaatcgaaacacgaggagatcgagctggtgagcctggaggagttc
tacagggaggctccgccggaaatcagcagtcgctctcccgtgcgcgagcctcctcgcgcg
tgggatgaccaggctggagcagtgctcgagacccggcgctttgcctcccggggcgcttca
ggaggcttttttttcgccttgcaggatgctcggtactacagcgaggagggcgaggtggat
ctgcgcgaccccatcaaagactatgagctctacaaagagacttgccaggagctgcagaga
ctcatggcagagatccaggagctgaagagcaaaggcgtcaaggacaatgcttccgagata
gacgagcggcgcattcagagctgcgtccacttcatgaccctcaagaaactcaaccgcttg
gctcacatccggctgaagaaaggaagagatcagacccacgaggcaaagcagaaggtggac
gcgtatcacctgcagctccagaacctgctctacgaggtgatgcacctgcagaaagagatc
accaagtgcctggagttcaactctacctggctgctctcccttctcagagcacaacactgg
gctgagcttcgagttgctcttcccgtttgttttcctgctctaataagttcctctctgtcc
ctgtttgcccttggccttgggagagctccttgtctgtcagtgtctgagctcccctggttc
ctgcagcaacgtttcgggtcaggagagctggggccaaggaaggccccatccggcagcaga
acttgctccgtgacagcgatgtgcggtggtaacccatctcccatccccaggttggcggag
aaatacaaggagtgtctggccaacaaggagaagatcctgaaggagattgaggtgaagaag
gaatatctgagcagcctccagccccgactcaacagcattatgcaggcctccctgcctgtc
caggagtatctcttcatgcccttcgaccaggcgcacaagcagtacgagatagctcggcac
ctaccgccgccgctctacgtcctcttcgtccaagccagcgcctacgggcaggcctgcgat
aagaagctcgtcgtggccatcgaagggagcgtcgaagaagccaaagccctgtacaagccg
cccgaggactcgcaggatgacgagagcgattcggacgcggaggaggagcagaccacgaag
cggcgcaggcccacgctgggcgtgcagctggacgacaagcgcaaggagatgctcaagcgc
cacccgctctccgtcaccgtcgacctgaaatgcaaagatgagaacgtgcttcacctgacc
ttctactacctgatgaacctcaacgtcatgacgaacgtgcttcacctgaccttctactac
ctgatgaacctcaacgtcatgacggtgaaaaccaaggtgaccaccgctgtcgagctgacg
acgcccatcagcgccggagacctgctgtccccagattccctcctgagctgcctgtacccg
ggagaccacgggaagaaaacgccgaacccagccaaccagttccagttcgataaagtgggg
tgcgtaagccccgactctgcctgcgcggacaactcgctgagcgcgagccacatggagatg
acagtgaagctgctgcggacgaggctgcagtcacgcctggctctccacaagcagtttgcg
tcactggagcacggcgtcgtgccggtgtccagcgagtgccagcacctcttcccttccaag
atcgtctcgcgcctggtgaagtgggctgccatcccctacgaggattacgcggagctgccc
tacaccagggacgtgctggaggccggcctggctgaggacacccacctctactacatggcg
ctgatcgaacggggaacggccaagctgcaggccgccgtggtgctcaaccctggctactcc
acgctgccgcccatcttcagcctctgcctcaactggaaaggggagcggaccagcagcaac
gacgacaacattcgggccatggagagcgaggtcaacgtgagctacaaggagctgtggggg
cccaaacccggctaccagctcctcaccaaccagctgcagcgcctctgcatggtgctcgac
gtctacctggagacggagtcacacgacaccagcgtggaggggcccaaggagttcccccag
gagaagatgtgtctgcgcctcgtcagggggcccacccgcatgaagccgttcaagtttaac
tacccgcagggtttcttcagtcatcgctga
DBGET
integrated database retrieval system
