Apteryx mantelli mantelli (North Island brown kiwi): 106485379
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Entry
106485379 CDS
T04298
Symbol
CDH23
Name
(RefSeq) cadherin related 23
KO
K06813
cadherin 23
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aam03037
]
106485379 (CDH23)
04515 Cell adhesion molecules [BR:
aam04515
]
106485379 (CDH23)
Cilium and associated proteins [BR:
aam03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106485379 (CDH23)
Cell adhesion molecules [BR:
aam04515
]
Cadherins
Major cadherins
106485379 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_2
Cadherin_pro
PCDH15_12th
Flagellin_arch-type
Motif
Other DBs
NCBI-GeneID:
106485379
NCBI-ProteinID:
XP_013799170
LinkDB
All DBs
Position
Un
AA seq
3073 aa
AA seq
DB search
TKSEFTVEFSVSDSQGVIKGTVNIQVGDVNDNAPRFHNQPYSVRIPENTPVGTPIFIVNA
TDPDQGAGGSVLYSFQPPSSFFAIDSGRGIVSVIRELDYEVTQAYQLQVNATDQDKNKPL
STLANLAIIITDVQDMDPIFINLPYSTNIYENSPPGTTVRMITAVDQDKGRPRGIGYTIV
SGNTNSIFALDYISGALTLNGPLDRENPLYSSGFILTVKGTELNDDRTPSNATVTTTFNI
LVIDINDNAPEFNSSEYSVAIPELAQVGFALPLFIQVQDKDEGPNSVFEVYLVGNNSNHF
IISPTSIQGKADIRVRVAVPLDFETIPRYEFSLFANESVPDHVGFARVKINLINENDNRP
IFSKSLYNVSLFENATVGTTVLRVHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVIVLI
ARLDFEATQRYTLTVIARDGGGEETAGRVRINVLDVNDNVPTFQKEAYLGALRENEPSIA
QVLRLRASDEDSPLISVNHPLDYEQISNGXVISVNHPLDYEQISNGVIYLTVMAKDAGNP
PLNSTVPVTIEVFDENDNPPTFSKPSYVITVVEDIMAGATVLFLNATDMDRSREYGQESI
IYSLEGSSHFRINARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLL
DINDNYPTWKDEPYFINLVEMTPPNSDVTTVVAVDPDLAENGTVVYSIRPPNKFYSLNST
TGKIRTTGVVLDRENPNPQEAELMRKIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPT
FQNLPFVAEIAEGLPVGSSVFQVVAIDLDEGPNGQVTYRMQVGMPRMDFLINSSSGLISS
TAVLDRERISEYYLRVVASDAGVPSKSSTSTLTVKVLDVNDENPTFFPAVYNVSLPEDVA
RDFKVVRLNCTDADIGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETTASYTLI
LEAIDNGPTGNRRTGTATVYITVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVKATDA
DEGINGRVWYRIVKGNEHNNFRINPSTGLVMRGLRPLDREQNSSHVLEVEAYNTEQGPMR
SSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRDTGNGGLVSYKIL
SGAEGKFEIDESTGLITTIEYLDYETKTSYLMNVSATDQAPPNNQGFCSVYVSLLNELDE
AVQFSNISYEAIIMENVPLGSEVLRVQARSIDNLNQITYKFDPNTNAQALSLFKINGITG
VITVKGQVDREKGDFYTLTVVADDGGPKIDSTVVTITVLDENDNSPQFDITSDSSVSVAE
DCAVGKRIAVVLARDPDAGSNGQVTFSLTSGNVGGAFEIRTTNGTYGEVLVARPLDRELL
DHYTLRVRQPPSPPRRKEHTLRVSVLDVNDNPPVIDSPRGYNVSVSENVGGGTAVAQVRA
TDRDIGLNSVLSYYITQGNEDLTFRMDRVTGEIATRPSPPDRERQSSYHLVVTVEDEGNP
SLSATTTVHVTVLDENDNAPAFQQPLYEVTLDEGPATLNATLVTVQARDQDEGPNGTVAY
AITEGNILGTFHIDSATGQIRTVKELDYEISHGRYTLIVTATDQCPILSRRLTSTATVLV
NLNDINDNQPTFPRPYEGPFDITEGQPGPRVWTFLAHDGDSGPNGQVEYSIIDGDPLGEF
VISPVEGELRVRKDAELDRENIPFYNLTIAARDRGVPPLSSTILVGVRVLDINDNDPVLL
NLPMNLTLSENAPVSSFVTRILARDADKGPNALLTFDITSGNSEKAFYINSTTGIIYVNR
PLDRERVAEYRLTITVKDNPENIRNARRDFDLLVISIADENDNHPLFTQSSYQAEVMENS
PPGTPITVLNGPILALDGDQGSNAVVTYQLLEASPDLFVINNRTGAVSVKSGRVIDREAF
PNPHLEFTLVASDVGGLNSTASLRVTILDENDNRPIFHPASVTARLRENSPPGFSVLRVT
ATDADSGLNKQLDYRIEGGGQDRFMIDTASGVIRVANITIDREERDAYRLTVVAVDQGTP
ALSGTATVSLFIDDVNDCRPEFINPIQTVSVPESAAPGTVVAEMTAVDRDLNPRLEYYLL
EIVARDDTDALVPDQQGVFAVDFKTGAVKVKTPLNRELVATYEVTISVHDNASEVLDHSV
SMPNAKLTINVLDVNDNTPRFRPFGATYFTEKILEGATQGTTLISISAVDPDKGANGQIT
YELLNLSPEGYACLEDQSAGKVIANRTVDYEEVQWLNFTIRASDNGSPRRSAEIPVYLQI
VDVNDNNPIFSQPSYQKAVFEDVPLGTVILRVKATDADSGRFALIQYSLGDGEGKFGINP
NTGDIYILSALDREKKDHYTLTAVARDNPGDVSSNRRENSVQVLITVLDINDFRPQFSKS
QFSTSVYENEPAGTSVITMSATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLITSRRRLQ
SYERFNLTVVATDKGRPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKEGTFGREPS
AAKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYMRLKKLFAQRMVHKAT
ASLGDRSSVTEVDGVERAXEPYYSIIVKASSQRNWTPPRGHRAGRAQAWDLSTDLTLQEV
RIFLDDINDQAPQFTKSEYTAGVATDAKVGSELIRVVAVDADVGNNSLVMYNILGIRYIK
QHSNDSEEVANIFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLAGHNDTAIVGIYILR
DDQRVKIIINEIPDKVRQFEEEFISLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIH
VVNRETNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARPPDDLSALQMAIIVL
AVLLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPNTNKYSFDGRLRPS
RWALHGEMRIPRGPGGGGDLCVGLLQLIQKDLDEEEEHSPGQGSLRFRHKQPVELKGPDG
IHVVHGSTGTLLTSDLNSLPEDDQKGLGRSLETLAADCGGYSDHNARTESAKSTPLHKMR
EVIMESPLEITEL
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
accaagtcagaattcacggttgaattttctgtcagtgacagccagggggtgatcaaaggg
acagtcaacattcaagtgggagacgtgaacgacaatgccccgaggtttcacaaccagccc
tacagcgtccgcatcccggagaacacaccagtgggcactccgattttcatagtgaatgcc
acggacccagaccagggggccggaggcagcgtgctttactccttccagcctccttccagt
ttctttgccatagacagcggccgtggcatcgtgtcggtgatacgggaactggactacgaa
gtgacgcaggcttatcagctccaggtgaacgcaacggaccaagacaaaaacaagccgctg
tccactctggccaacctggcaatcatcataaccgacgtgcaagacatggaccccattttc
atcaacctgccctacagcacgaacatctacgagaactcgcccccgggtaccaccgtgcgg
atgataactgcggttgaccaggacaagggccgtccccggggaatcggctacaccatcgtc
tcaggtaacaccaacagcatctttgcactggactacatcagtggagccttaaccctgaat
gggccgctggaccgagaaaaccccttgtacagctctggattcatcctcacagtgaagggg
acagagctgaacgatgaccgcacaccctccaacgccactgtcaccaccaccttcaacatc
ctagtcattgacatcaatgacaacgcgcctgagttcaacagctccgagtacagcgtggcc
atccccgagctagcccaggtgggctttgccctccctctcttcatccaggtgcaggacaaa
gacgagggccccaacagtgtttttgaggtttacctggtgggcaacaactccaaccacttc
atcatctcgccgacctccatccaggggaaggcagacatccgcgttcgcgtggcggtgccg
ctggacttcgagaccattcctcgctacgaattttcgctctttgcaaatgagagcgtccca
gaccacgtcggctttgcacgagtgaagatcaacctcatcaacgagaacgacaaccgcccc
attttcagcaagagcctgtacaacgtcagcctgtttgagaacgccactgtgggaaccact
gtcctcagggtccatgcaactgacaacgatgtgggcacgtatggaaaagtcagttatttc
ttcagtgatgatcctgaccgcttctcgctggacaaagacaccggcgtgatcgtactgatt
gcgcggctggacttcgaggccacgcagcgctacaccctgactgtcatcgcccgggacggc
ggcggggaggagacggcggggcgcgtgcggatcaatgtccttgacgtcaacgacaacgtg
cccaccttccagaaggaggcctacctgggggcgctgcgggagaacgagccctccatcgcc
caggtgctccggctccgggcatctgatgaagactcccctctgatcagcgtgaatcaccct
ctcgactacgagcagatctccaatggcncggtgatcagcgtgaatcacccccttgactac
gagcagatctccaatggcgtcatttacctgactgtgatggccaaggatgccggcaaccca
ccgctcaacagcaccgtccccgtcaccatcgaggtctttgatgaaaacgacaacccaccc
acgttcagcaagccatcctacgtcataaccgtcgtggaggacattatggcaggagctacg
gtgctgtttctgaatgccaccgatatggaccgctccagggaatacgggcaggagtcaatt
atctactcgctggaagggtcctctcattttcggatcaacgctcgctccggggaaatcaca
acaacttctttgctggaccgagaggccaaatctgaatatatcctcattgtccgggcagtg
gatggaggcgtgggccatcaccagaagaccggcattgctatggtgaacatcacgctgctg
gacatcaatgataattatcccacatggaaagatgagccgtacttcattaacctggtggaa
atgactccccccaactcggatgtcaccacggtggtggccgtggacccggacctggcggag
aacggcaccgtggtctacagcatccggccccccaacaagttctacagcctcaacagcacc
acggggaagattcgcaccaccggcgtcgtgctggaccgcgagaaccccaacccccaggaa
gcggagctcatgcgcaagatcgtggtgtcggtcacagactgcgggaggccacccttacga
gctaccagcagcgccacggtcttcgtcaacctgctggacctgaacgacaacgaccccact
ttccagaacctgcccttcgtcgccgagatcgccgagggccttcctgtgggctcctccgtc
ttccaggtagtagccattgacctggacgagggtccaaatgggcaggtgacctaccgcatg
caggtgggcatgccccgcatggacttcctcatcaacagcagcagcgggctcatcagctct
accgccgtgctggacagggagaggatctccgagtactacctccgtgtggtggccagcgat
gctggcgtgccctcgaaaagctccaccagcaccctaactgtcaaagttctggacgtgaac
gatgagaaccccaccttcttcccagccgtctacaacgtgtcactgcccgaagacgtggcc
cgggatttcaaggtggtccggctcaactgcacggatgctgacattggactgaacgctgag
ctcagctacttcatcacgggtgggaaccaggatggcaaattcagcgtcggcttccgagac
ggggtggtcaggacagtcgtgagtctcgacagggagacaacggcttcctacacgctgatc
ctggaggccatcgacaacggccccaccgggaacaggcggaccgggactgccaccgtgtac
atcaccgtcctggatgtcaatgacaatcggcccatcttccttcagagcagctacgaagtc
agcgtgccggaggacatcccggcggccagcagcatcgtgcaggtgaaagccacggatgcg
gatgaaggtattaacgggagagtgtggtacaggattgtcaagggaaacgagcacaacaac
tttcggatcaatcccagcaccgggctggtgatgcgaggcctgcggcccttggaccgagag
caaaactcctctcacgtcctggaggtggaggcctacaacaccgagcagggaccgatgagg
agctccgtgagggtgatcgtctatgtagaagatgtcaacgacgaggtgcccgtgtttacc
cagcggcagtacaaccgcctggggctgcgggagacggctgggatagggacgtcggtcgct
gtggtccgagcaacagaccgagacacggggaatggcggtctggtgagctacaaaatcctg
tcaggtgctgaagggaagtttgagatcgacgagagcacgggcctcatcacaaccattgag
tacctggactacgagaccaaaaccagctacctgatgaacgtctccgccacagaccaggct
ccccccaacaaccagggcttctgcagcgtttacgtgagcctcctgaacgagctggacgag
gctgtgcagttctccaacatcagctacgaggccatcatcatggagaacgtccccctgggc
tccgaggtgctgagggtccaggcccgctccatcgacaacctcaaccagatcacctataag
tttgaccccaacaccaacgcccaggcgctctccttgttcaaaatcaacgggatcactggt
gtgatcacggtcaaaggccaggtggatcgagagaagggagacttctacaccttgacagtg
gtggccgatgatggagggccgaagattgactctacggtggtgaccatcacggtgctggac
gagaacgacaacagcccccagttcgacatcacctccgactcgtccgtgagcgtcgccgag
gactgcgccgtgggcaagcggatcgccgtggtcctggcccgggaccccgacgcgggcagc
aacgggcaggtgaccttctccctgacgtcgggcaacgtcggcggggccttcgagatccgc
accaccaacggcacgtacggcgaggtgctggtggcgcggccgctggaccgcgagctgctg
gaccactacaccttacgggtaaggcagccgccttccccgccccgccggaaggagcacacc
ctgcgcgtgagcgtcctggacgtcaacgacaacccgcccgtcatcgacagcccgcggggc
tacaacgtcagcgtcagcgagaacgtcggcggaggcaccgcggtggcccaggtgcgcgcc
accgaccgggacatcggcctcaacagcgtcctctcatactacatcacccaaggcaacgag
gacctgaccttccgcatggaccgcgtcacgggggagatcgccacccgcccttcgccgccg
gaccgcgagcgccagagctcctaccacctggtggtcaccgtggaggacgagggcaacccc
tccctgtccgcgacgaccacggtgcacgtcacggtcctggacgagaacgacaacgctccc
gccttccagcagccgctctacgaggtcacgctggacgagggtcccgccacgctcaacgcc
accctcgtcaccgtgcaggcccgcgaccaggacgaggggcccaacggcaccgtcgcctac
gccatcaccgaaggcaacatcttgggcaccttccacatcgacagcgccacggggcagatt
cgcactgtgaaggagctggactacgagatcagccacgggcgatacaccttgatcgtcacc
gccacagaccagtgccccatcctctcacgccggctgacgtccaccgccacggtgttggta
aacctcaatgacatcaacgacaaccagcccacctttccgcggccctacgagggacccttc
gacatcacggaagggcagccaggcccacgcgtgtggaccttcctggcccacgacggggac
tcagggcccaacgggcaagtggagtacagcatcatcgatggggaccctctcggggagttt
gtgatctcgcccgtggaaggggagctccgcgtgcggaaggacgccgagctggaccgcgag
aacatccccttctacaacctcaccatcgctgcccgcgacaggggggtgcctccgctcagc
tccacgatcctggtgggcgtgcgtgtgctggatattaacgataacgaccccgtgctcctc
aacctcccgatgaatctcaccctcagcgagaatgcccctgtctccagcttcgtcacccgc
atcctagcccgggatgcggacaaggggccgaacgctctcctgaccttcgacatcacctct
ggcaactcggagaaagccttttacatcaacagcactactggcatcatctatgtaaaccgc
cccttggacagggagcgggtggccgagtacaggctcaccatcacagtgaaggacaacccc
gagaacattcgcaatgccaggcgggattttgacctgctggtcatttcaatagcggacgag
aacgataaccaccccctcttcactcagagctcctaccaggccgaggtgatggagaactcg
cccccagggactcccatcacggtgctcaacgggcccatcctggctctggacggcgaccag
ggaagcaacgctgtggtgacataccagctcctggaagcatccccagacctctttgttatc
aacaacaggacaggtgctgtttcagtcaagtccggcagggtgatagaccgcgaggccttc
ccgaaccctcacctggagtttaccctggtggctagtgatgtgggagggctgaacagcacg
gcgagtctcagggtgaccatcctggatgaaaacgacaaccgccccatcttccacccagcg
tccgtgacagcgcggctgcgggagaacagccccccaggcttttctgtcctccgggtgacg
gcaaccgacgccgacagtggcctcaacaagcagctggattaccgaatcgagggcgggggc
caggacaggttcatgattgacaccgcctcgggggtgatccgcgtggccaacatcaccatc
gaccgggaggagcgggatgcctaccggctgacggtggtggctgtggaccaaggcacgcca
gcgctctcgggcacggccaccgtcagcctcttcatcgacgacgtgaacgactgccggcct
gagttcatcaaccccatccagacggtcagcgtacccgagtcagccgcccccggcactgtg
gtggccgagatgaccgctgtcgacagagacctcaaccctcgcctagagtactacctcctg
gagatcgtggcccgcgacgacacagatgcgctggtgccggaccagcaaggagtgtttgcg
gtggattttaagacaggagctgtgaaagtcaaaacccccctcaaccgggagctagtggcc
acctacgaggtcaccatctccgtgcatgacaacgccagcgaggtccttgaccactcggtc
agcatgcccaatgccaagctgaccatcaatgtcttggacgtcaatgacaacacgccccgt
ttccgcccctttggggccacctatttcactgagaagatcctggagggagccacacagggc
accacgctgatctccatctcggcagtggacccagacaaaggagccaacgggcagatcacc
tacgagctgctgaatctctccccggaaggctacgcctgcctcgaagaccagtcggcaggg
aaggtcatagccaacaggacagtggactacgaggaggtgcagtggctgaacttcaccatt
cgagcttcagacaacggctctccccgcagatctgccgagatccccgtgtaccttcagata
gtggatgtcaacgacaacaatcccattttcagccagccgtcctaccagaaagctgtcttt
gaggacgtcccgttgggtacggtcatcctgagggtcaaggccacggatgcagattctggg
cgttttgctctgatccagtacagtctaggggatggagagggcaagtttgggataaatccc
aacacgggtgatatctacatcctatccgccctggaccgggagaagaaggatcactacacg
ctgaccgctgtggccagggacaaccccggggacgtctctagtaaccgtcgggagaactct
gtgcaggtgctgatcacagtcctggacatcaatgacttcaggccccagttcagcaagagc
cagttcagcaccagcgtctatgagaacgagccagcagggacatctgtgatcaccatgagc
gcaacagacctggacgagggagacaatggggtggtgacctacagcatcgagggccccgga
gcagaggccttcaagatcaataaagactctgggctcatcacatcccggcggcgtttgcag
tcctacgagaggttcaacctgactgtggtggccacggacaaagggcgaccccctctctgg
gggacaaccatgctccacattgaagtcattgacattaatgacaaccgtcccgtgtttgtc
cgcccacccaacggcaccatcctgcacatcaaggaggggaccttcggcagagagccttct
gcggccaagcctgaagatgaccgctacctccgggccgccatccaggagtacgacaacatt
gccaaactggggcagatcatgcgcgaggggcccatcaagggctctctcttgaaggtggtc
ctggatgattacatgcgcttgaaaaaactctttgcccagcggatggtgcataaggccacc
gccagtctgggggaccggtcctcggtcacggaggtagacggggtcgaacgagccgnggag
ccatactactccatcattgtcaaagcgtccagccagaggaactggacaccacccaggggc
caccgggcaggcagggcccaggcctgggacctcagcacagacctgacgcttcaggaggtg
cggatcttcctggacgacatcaacgaccaggcaccacagttcaccaagtcggagtacaca
gcaggggttgccacagacgccaaagtgggttcagagctcatcagagttgtagctgtggac
gccgacgtggggaataacagcctggtcatgtacaacatcctggggatccgctacatcaag
cagcactccaacgactccgaggaggtggccaatatcttcagcatcggtacccttgatggg
atcctgcgaaccttcgacctgttcacagcctacaaccctgggtactttgtggtggacatc
atggcttctgaccttgcgggccacaatgacacagccattgtggggatttatattctgcga
gatgaccagcgagtcaaaatcatcatcaatgagattcctgacaaggttaggcagttcgag
gaggagttcatcagcctgctttccaacatcacaggtgccatcgtcaacacggatgacgtg
cagttccatgtcgacaagaaaggccgggtgaactttgcgcagacggaactgctgatccat
gtggtgaacagggagaccaaccggattctggatgtggagcgggtaattcagatgatcgat
gagaacaaggagcagctgagaaacctcttcaggaactacaatgtgctggatgtgcagccc
gccatcaccgcccggccgccggacgacctctcagctctgcagatggcgattattgtgctg
gccgttctcctcttcctggctgccatgctcttcatcctcatgaactggtactaccgaaca
gtgcacaaaagaaaattaaaagctatagtggctggctccacaggaaacaggggcttcatg
gacatcatggatatgccaaacaccaacaaatattcctttgatgggaggctccgtccctct
cgctgggcgttgcacggggaaatgaggatcccccgtggccctggcggtggtggtgatctc
tgcgtgggccttttgcagctgatccagaaggacctggatgaggaagaggagcacagcccc
ggccaggggagcctccgcttccggcacaagcagcccgtggagctgaaagggcccgacggc
atccacgtggtgcacggcagcacgggcacgctgctcacctccgacctcaacagcctgccc
gaagacgaccagaaggggctgggccgctccctggagacgctggccgcggactgcgggggc
tacagcgaccacaacgcccgcaccgagtcggccaagtccacccccctgcacaagatgcgg
gaggtgatcatggagagcccgctggagatcacggagctatga
DBGET
integrated database retrieval system
