Apteryx mantelli mantelli (North Island brown kiwi): 106485594
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Entry
106485594 CDS
T04298
Symbol
ARID1A
Name
(RefSeq) AT-rich interaction domain 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106485594 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aam03000
]
106485594 (ARID1A)
03021 Transcription machinery [BR:
aam03021
]
106485594 (ARID1A)
03036 Chromosome and associated proteins [BR:
aam03036
]
106485594 (ARID1A)
Transcription factors [BR:
aam03000
]
Eukaryotic type
Helix-turn-helix
ARID
106485594 (ARID1A)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106485594 (ARID1A)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106485594 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Apionate_lact_N
Motif
Other DBs
NCBI-GeneID:
106485594
NCBI-ProteinID:
XP_013799459
LinkDB
All DBs
Position
Un
AA seq
1551 aa
AA seq
DB search
MPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHA
GIGPYQQNSMGSYGPQSGQYGPQGGYPRQPNYNAMSNANYPSPGMGGNMNPMGAGSQMHG
QTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMH
VAANSIQTRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMA
ASPEMMGLGDAKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKI
WVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNV
GTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQ
GPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGGDPTFQKRN
SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRA
AGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSR
YPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHE
GEMYNVPYSAGQGQTQQQLPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGGP
QNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQSTPEGPQQGAMWQGRNEIGYSYPNR
QSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSN
YQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQ
PPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFC
RASSPLHEEGDEDDEPRRLNCEMEEDGEEEEEAAFASKDKAPLESSEEKLVSKFDKLPVK
VVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLFTHKRASCN
SVLRKRSAAESNLSTREGEASASDSSSEKRITATMDDMLSARPGSLAGEEEEVKASETAK
ESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFV
PGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLE
MLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSP
QRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANL
AQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRA
ARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccgaccgcctagcggccagtcggacagtatcatgcatccttccatgaaccag
tcaagcatagcgcaagatcgaggttacatgcagaggaatcctcagatgccccagtacagc
tcgccccagcccggctcagccttatctccccgtcagtcttctggaggacagatgcacgct
ggaatcgggccgtaccagcagaactccatggggagctacggaccccagagcgggcagtac
ggacctcaaggaggttatcccaggcagccaaactacaatgctatgtccaatgccaactac
cccagtccaggaatgggaggaaacatgaacccgatgggagcagggagccagatgcatggg
cagactggtgtgccgccatacagtgggcttcccccagggaggatgagccatgcgaccatg
gggaacagaccttatgggcctaacatggcgaatatgcctcctcaggtgggcacagggatg
tgccccccaccaggtggcatgaaccgcaaagcacaagaggcggctgctgccgctatgcat
gttgctgccaactccatccagaccaggcctcctggttatcccaacatgaaccaagggggg
atgatggggactggacctccttacggacagggaattaacagtatggctggcatgataaac
ccccagggcccaccctatccgatgggtggcaatatggccaacaactctgcagggatggca
gcaagtcctgaaatgatgggtcttggggatgccaagttaacacctgctactaaaatgaac
aataaagcagatgggacgccaaaagcagaatccaagtcaaagaagtccagttcctctact
acaaccaacgagaagatcaccaaactctatgagctgggtggtgagcctgaaaggaagatc
tgggtagatcggtatctagcctttactgaagagaaggccatgggcatgaccaatctccca
gcagtaggcaggaaacccttggacctttaccggctctacatctcagtgaaggagattgga
ggattgactcaggtcaacaaaaacaagaaatggcgtgagttagccacaaatctcaacgtg
ggcacgtccagcagtgcagctagttctttgaagaagcagtacatccagtgtctctatgcc
tttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgcagctgcggat
tcgaagaagtctcaaactaagatacaacctccatctccagcgggttcaggctccatgcag
ggtcctcagacgcctcagtccaccagcagctccatggcagaaggaggagacttgaagccg
ccaactccagcgtctacgccacacagtcagatgccccctttgccaggcatcaggagtaac
tcagtgggccttcaggatgccttcgcagatggcggcgatcccacgttccagaagcggaac
tccatgactccaaatccaggttaccagcccagcatgaatacctccgacatgatgggtcgc
atgtcttatgagccaaataaagatccttacagcagtatgaggaaagctccgggaagcgat
cccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttacaatcgtgct
gcaggtccagggatgggtaacatggccatgggacagcggcaacactattcctacggaggt
ccttacgacagagtgaggacggagcctggcatgggacccgagggcaatttagctactgga
actccacagccaaacatcatgccttccacccctgagtcagggatgtactctcccagccgc
tacccgcagcagcagcagcagcagcaaagacatgattcctatggcaatcaattctccact
caaggcacatcctcgggcagccctttccctagccagcaaactaccatgtatcaacagcaa
cagcagaattacaagcgaccgatggacggcagctacggcccgcctgccaagcggcacgaa
ggggagatgtacaacgtaccatacagtgccgggcaagggcagacgcagcagcagctgcct
ccagcacagacccagcaaccgagccagcagcaaactgcacagccgtctccccagcaggac
ttgtataaccagtatgggagtacataccctgctgctgaccgccgatctgccggagggcca
cagaaccagttcccattccaatttggcagagacagggtctcggctcccccaggctccaat
gctcagcagaacatgcctcctcagatgatgggtggccccatacagtctactccagagggc
ccgcagcagggcgccatgtggcaagggcgcaacgaaatagggtacagctatccgaatcgg
cagagcactggctctgcgccccaggggcctgcttatcacggagtgactcgaacagatgaa
attctgcattcagatcagagggtaaaccatgagggaccatggccttcccatgggaaccgg
caacctccttatggtccctctgcccccgtacctccaatgactaggcccccccagtctaac
taccagacccctcctagcatgcagaatcacattcctcaggtatccagcccagcacctctg
cccagacctctggagaaccgcacttctcctagtaaatctccattcctgcactcggggatg
aaaatgcagaaggcaggaccaccagtccctgcctcgcatataacaccagcagctgtacag
cctcccatgatacgacgagacatcaccttccctccgggatcagtagaagctacgcaacct
gtgttgaagcagaggagacggctgacagcaaaagatattggaactcctgaagcctggaga
gtgatgatgtctctgaagtctggactgttggctgaaagtacgtgggccttagataccata
aacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctgccgggc
ttgctggagctcttggtggagtatttccggcgttgcctgatcgagatctttggaatcctg
aaggaatacgaggtgggagacccagggcagagaacactattggatcctggaaggttctgc
agagcttcaagtccccttcacgaagaaggggatgaagatgatgaaccacggcgcctgaac
tgtgagatggaagaggatggtgaggaagaggaggaggctgcatttgcgagcaaggacaaa
gcacctctagagagcagcgaggaaaagctagttagtaaatttgacaagcttccagtcaag
gtcgtgcagaaaaacgacccgtttgtggtagattattcagacaagctggggcgagtgcag
gagtttgacagcggactgctgcactggcggatcggtggcggagataccactgagcatatt
cagacccactttgagagcaagacggagctactgtttactcacaaacgagcttcctgcaac
tctgtcttgaggaaacgttcagcggctgagagcaatctaagcactagggaaggagaggct
tctgcgtccgacagctcctcagagaagaggataactgccaccatggatgacatgctttca
gcacgtccgggctccctggcaggtgaggaggaagaagtcaaagcttcagaaactgcgaag
gaaagcagcaagtttccatttggcattagtccagctcagagccacagaaatataaaaatt
ttggaggacgagcctcacagtaaagatgagacgcccctctgcaccctcctagactggcag
gactctctggctaagcgctgcatctgtgtctctaacatcatcaggagtttatcatttgtg
ccgggcaatgactttgaaatgtctaaacatcccgggctgctgctgattctagggaaactg
attctcttgcaccacaagcatccagagcgcaaacaggcacccctgacgtatgagaaagag
gaggagcaggaccaaggtgtgagctgcaacaaggtggagtggtggtgggactgcttggag
atgctgcgtgaaaatacactggtcacgttggccaacatttctggccagctggacctttcc
ccttacccagaaagcatctgtttgcctatcctggatggacttctccattgggcagtatgt
ccatcagcagaggcccaggatccctttccaacgctggggcctaatgctgtcctctcccct
cagagactggttttggaaacactcagcaaactcagcatccaggacaacaacgtggatttg
attcttgcaactccccccttcagtcgcttggagaagctctacagcaccatggtgcgtttc
cttagtgacagaaagaacccggtgtgtcgagagatggctgtggtactactggccaacttg
gcacagggggacagcctggcagcaagagcgattgctgtgcagaagggcagcattggcaac
ttgctgggcttcttggaggacagcctggccgccacgcagttccagcagagccaggctggc
ttgatgcacatgcagaacccacccttcgagtcaacgagcgtggacatgatgcgccgagct
gctcgggcgctgctcgccctggccaaggtggacgagaaccactcggagttcacgttatac
gagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggtttcacaagtt
atttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
