Apteryx mantelli mantelli (North Island brown kiwi): 106485699
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Entry
106485699 CDS
T04298
Symbol
SETX
Name
(RefSeq) senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106485699 (SETX)
Enzymes [BR:
aam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106485699 (SETX)
5.6.2.5 RNA 5'-3' helicase
106485699 (SETX)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106485699 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_19
AAA_30
AAA_12
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
ResIII
iSTAND
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106485699
NCBI-ProteinID:
XP_013799589
LinkDB
All DBs
Position
Un
AA seq
2432 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKNYASKWLSQEDLEGSNDDLCYCLECVVEYHRAREKLPSLHE
VLWELETSRLIAHIEKSMKEEVGEDDELFIVDENGETQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQGHNSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFDSPDIYSSSMIEKGKLILLPSHLYDTTNYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEADDDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRNSFKRTKSEPESDYDDEMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHHSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIRGILNEKIQQCDKVSEFFVLILVSIIELHRNKKCLHLL
WVSSQEWVEAVVRCAKLPAIAFTRCTEKTSGNYPRGSSALSSQASNSVQHACVQLIRSLL
REGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLSIQETQELQMCLKQVIRSIKGRAMNTS
VSIENNANSTTLPTLSIKQEKRMHGDECEMTVHGRDDLCSPFSFTSKGVRDGGCQENLFT
RRNDAWKEECRDACKTSRSFTERHLVDVKKEPDDKAAQEYECPQNSLTTKICGEVQKNMD
SHLVSGNCDKDNWFFNPSFQCSDFKRGGELETRGGELENKCEMEPVTPKCLVAQTCIDSP
EHVHSSDEKESNMSPNSSSKFKIDADRLMNLKQKVLRTDWTSKLSQLVKPPNLQNSCMAV
SASKAEADQPQLCTDSACASKDCYGHQGVNIACENEISVTSQASRSFENKQEKSMNDTFQ
YRLASIKQESKETLLDCSRASKNEPDLQENEDDHFLLSGITNNLMKKRPSEERSSSLLKS
VFKKDLNMQTSDQEQPNLGNLTKDDCKGQILRTFCVDKTSANGHVRSGSEDKGNVSNTAL
RISPLSVKCESSDRLLEFSKYFKKEDNSMGKSDEDFVRVVSGDSNLTDSEVDRDLSKLSL
AAYAKSVNFPIDSSQESSVYHNICDIKRKVKGAVRSSGNVQSNKSPCDADCLDNQIIIIS
DSSDEEKSVPLAEQTKKTNEDKCPEKQPLTSSCISDTEIKKELKTPSSPLSHDECESQYF
EFETEDEVFSVWQDTQMYTMEKIQEYKQDRVSTSVGSSDSDSVLKDYTNEWGYDTDYISD
DTMEKEASAVEKQIDNLSHQKEAGNTEEVSSSALQESISKGIKKDQLENSADKSAVAEDF
IPNTELTEPRASTSNISLASKLAIKKNSVSPQNNLAKSKLVRTIQRSPKRTLLKTAQSKK
LSQSTSKNSQPGRSTPAVVPPKKVRQCPAPTSTAEKLGLKKAPRKAFELSQRSLESLAQL
RSYGKAAGKVGTAQKQKIKLITPQTLSIKNNKKMLACQDLQFLRQTRPKQSVRGKNLAGS
SDSRSKKVSKVDAKSVKQKPKSFGLTSVEGAVENQGGGKMEQTFFPSASERKQIRDVSLE
KEGMQTTHISKIPVFSDSNTKMKENNMVVPPVPVDLDLFSPVAAEDDKPSEGGCVVQSKF
EKTTSKENGCKSNENSDDDDDLFLTQLDPVDMELCSQEENDGEITISSKPVEMEIDAAEN
LQQNKPLSIVKCKHKDCVEKVEKIGEYCSKHSTTNLETDHLFAKPLLPPSKTRKPSTTKV
FSSVSSSRNAAFTKDLEDVKKLPPASKSKVNVVKPVVFRPPNAKAVPAGNQVCKTPSFSN
VPQPCVSSNVLRPQNTQMDNASNISRRPVREEYYSSFLGAQQRDHSIFVKEVLKWTYEMF
ANCSQYGPPDSLLQSVVASVPIKFQGYNDYFNTFFPLMMLNAFETLAQDWLESQRMRERS
YYFHLQNFCADLKRADFIAHIRESDLARQLHPKEDDLIFLVVQERNAFGEESEVVNHLVK
HVGLVTRFSRASGSSARQNEQHPVCHLSVQTQGNLSFFINKQVKCVVVGSLVTTQRTFKG
LLLLSRSPLAKPIINPSYNDFCPRDLHIASESAAYIKEYNEDQKRAIDTAYAIVKQHPGL
PKICLIHGPPGTGKSKTIVGLLSRVLRENTRNEKRTQKLNSKIKPNRFLVCAPSNAAVDE
LMKKIIVEFKEKCQNRQDPLGNCGDIRLVRLGAEKSISSEVRGFSLDKQVEHRMKRKLPN
HDQGIQKRKEALDQKLDMLSRQRAMHRCEKRDINQMLDDEIGRLSKERQQLASQLKEVRG
CSQRVQAEIILESDIICCTLSTSGGTLLESAFWRQGLDPFSCVIVDEAGQSCEVETLIPL
IHRCNKLVLVGDPRQLPPTVKSQKAQDYGYDHAAEXDQSLMARLHRHLEAQVQQNILRSL
PVVQLTVQYRMHPDICLFPSNYVYGRSLKTDK
NT seq
7299 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacgcctagtggttctgataccactgagttcctgaagaac
tatgcttctaaatggttgtcccaggaagatcttgaaggatccaatgatgatctctgttac
tgcctggagtgtgtggttgaataccacagagcaagggagaaattgccaagcttgcatgag
gtcctgtgggagttggaaacttcccgtctcattgcccacattgagaaatccatgaaagaa
gaagttggagaggatgatgaattgtttatagtggatgagaatggggagacacagctgtct
ggttatgtaggcccggattttgaaaataacttgcgagtgccccttctagaaatactgaaa
tatccctatctgctgctgcatgagaaagtcagtgagctttgtgtagaagtgctctgtaga
atggaacaaggtcacaactcctttcaggtctttgagaaatatccaggaatttatcttttc
ttggtacaccccaatgaagtgattcgtcgatgggccatcctaacggcaaggaacttaggg
aaggttgacagggatgattactatgacttacaggaagtgctgacatgcttgtttaaagtt
attgaattggggctttttgacagtccagacatttatagttcttcaatgattgaaaagggt
aaactcatccttctgccatctcatttatatgatactaccaactacaagaactattggtta
ggtatttgtatgttgctaacagtgctggaagaacaagctatggattccttgctgctgggt
ccagacaaacagaatgatttcatgcagtctatacttcacaccatggagaaagaagcagat
gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcaa
cttggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcaatagctttaagaggaccaaa
tctgaaccagagtcagactatgatgatgaaatggttacttgcagtcagattgtatataat
tacaatacagaaaagccccaaaaggatactggatggaaaactgccatttgtccagactat
tgccccaacatgtatgaagatatgcaaacgttggctaatgtgcttcagtctgatattggc
agagatatgcgcgtccatcacagcacgtttctgtggttcatcccttttgttcagtcactt
atggacctcaaggacttgggtgtggcatatatagtagaggtcattcactacctctgctca
gaaatcaggggtattcttaatgaaaaaatccagcagtgtgacaaagtctctgaatttttt
gtcctgatcttagtgtcaattattgaactacacagaaataaaaaatgcctgcatttgctg
tgggttagctcacaggaatgggtggaggcagtggtgaggtgtgctaagctcccagccata
gcatttacacggtgcactgaaaaaacatctggaaactatccgagaggttcctcagcatta
tcttcacaggcttctaactctgtgcaacatgcttgtgtgcagttgatacgcagccttctt
agagaaggttatcaaattgggcagcatgctctttgcaagcaatacctagacaaactcaat
ctccttctgcgtggaaatctatccttaggttggcagctgagcatccaggaaacccaggaa
ttacaaatgtgtttaaagcaggttataagaagtataaagggcagagcaatgaatacctct
gtgtctatagaaaacaatgcgaactctacaactttgcccaccctttctataaagcaagag
aagaggatgcatggtgatgaatgtgaaatgactgtacatggtagagatgacctttgttcg
cctttttcttttacatcaaagggagtcagagatggaggttgtcaggagaaccttttcact
agaagaaatgatgcctggaaagaggaatgcagagacgcatgtaaaacttcaagatctttc
actgaaaggcaccttgtggatgttaaaaaggagcctgatgataaggcagctcaggaatat
gaatgcccacagaactctctgacaacaaaaatatgtggggaagttcagaaaaatatggac
agtcatcttgtgtcagggaactgtgataaggataattggttctttaatccaagttttcag
tgctctgactttaaaagaggtggagagttggaaacaagaggtggagagttggaaaataaa
tgtgaaatggaacccgtaacaccaaagtgtctggttgctcagacttgcattgattctcca
gaacatgttcatagctcagatgagaaggaaagcaacatgtctcctaattcttcctcaaaa
tttaaaatagatgcagatagactcatgaatctgaaacagaaggtgctgagaactgactgg
acctcaaaactatcacagctagtgaagccacccaacttgcaaaacagttgtatggcagta
agtgcttcaaaagcggaagcagaccaacctcagctgtgtactgacagtgcatgtgcaagc
aaagattgctacggacatcaaggagtgaatatagcatgtgaaaatgaaatctctgttact
tctcaggcttcaaggagctttgaaaacaagcaggagaaaagcatgaatgatacttttcaa
tacagattggcctccattaaacaggagtcaaaagagacactgctagattgctctcgcgcc
tctaaaaatgaacctgatttgcaagaaaatgaagatgaccattttttgctttcagggatt
accaacaatttaatgaaaaaaagacccagtgaagaaagatcaagttcattgttgaagtct
gtgtttaagaaagaccttaacatgcaaacttcagaccaggaacagcctaatttaggcaac
ttaactaaagatgactgtaaaggtcaaattttgaggacattctgcgtagataaaacttca
gcaaatggtcatgttcgctctggctctgaagataaggggaatgtatccaacactgctctt
cggatcagtccactctcagtgaagtgtgaatcaagtgacagattgttagaattttcaaag
tatttcaagaaagaagacaattcaatggggaaaagtgatgaggattttgtgagggtggtt
tctggagatagcaatttaacagactccgaggttgatagagatcttagtaaattatcttta
gctgcatatgccaaaagtgtcaattttcccattgattcaagccaagaaagctcagtatat
cataatatatgtgacattaaaaggaaagtgaaaggtgctgtaagatcatctggcaatgtc
cagagtaacaagtcaccctgtgatgcagattgccttgacaatcaaatcattatcatttcg
gactcctctgatgaagaaaaaagtgtgcctcttgcggaacaaacaaaaaaaacaaatgaa
gacaagtgtccagaaaaacagcctttaacatccagctgcatttctgatactgagatcaaa
aaagaattgaagacgcctagctctcccttgtcgcacgacgaatgtgagtctcagtacttt
gagtttgaaacagaagatgaggtcttttcggtttggcaagatactcagatgtatactatg
gaaaaaattcaagaatataaacaagatcgtgtttcaacatcagttggtagcagtgactca
gatagtgtactgaaggattacacaaatgaatggggttatgatacagattacataagtgat
gataccatggaaaaagaagcaagtgcggtagaaaagcagatagataatctctctcatcag
aaggaagctggtaatacagaagaggtatctagttcagccttacaagaatctattagtaag
ggaatcaaaaaagatcaactggagaattctgcagacaaaagtgctgttgctgaagacttc
atcccaaacacagaactgactgaacccagagcatctacatctaacatatcgttagcttca
aagttggccattaagaaaaatagcgtgagcccacagaataatttagcaaaatctaagttg
gtaagaactattcaaagaagtcctaaaagaactcttcttaaaaccgcacaaagtaaaaaa
ctatctcaaagtacctcaaaaaactctcaacctggcaggtcaacacctgctgtggttcct
ccaaaaaaagttcggcagtgtcctgcaccaacatcaactgcagaaaaacttggtctgaag
aaggcaccccgcaaagcatttgaattgtctcagcgctctttagagagtctggctcaattg
cgtagctatggtaaagctgctgggaaagttggaactgcacagaaacagaagattaaatta
attactcctcagactttgtcaataaaaaataataaaaaaatgctagcctgccaagatctt
cagtttttaaggcagacaaggcccaaacaaagtgtcagagggaaaaatcttgcaggaagt
tctgacagtagaagcaaaaaggttagcaaagtggatgcaaaatctgtgaaacaaaagcct
aaaagttttggcttgacatctgttgaaggagctgttgaaaaccaagggggaggaaaaatg
gagcagaccttttttccctcagccagtgagagaaaacaaatcagagatgtctctctggag
aaggagggtatgcaaactacacacatctctaaaatacctgttttttcagactcaaacaca
aaaatgaaagaaaacaatatggtggttcctcccgtacctgtggatttggatctcttttcc
cctgtagctgctgaagatgataaaccttcagaaggaggttgtgttgtccagtctaagttt
gagaagacaacttcaaaagaaaatggatgtaaatcaaatgaaaacagtgatgatgatgat
gatttatttttaactcagttagatcctgtggatatggaattatgttcccaagaggaaaat
gatggagaaattactatatctagtaaaccagtggaaatggaaatagatgctgctgaaaac
cttcagcagaacaaacccttgagtattgtgaaatgtaagcacaaagactgtgtggaaaaa
gtggaaaaaataggtgagtactgtagtaagcattcaactaccaatttggaaacggatcat
ttgtttgccaaacctttgctgccaccttctaaaacaagaaagccttccactaccaaagtt
tttagctcagtaagctcttcacggaatgcagccttcaccaaggatcttgaagatgttaaa
aagctaccaccagcttcaaaaagcaaagtaaacgtagtgaaacctgtggtgttcagacca
ccaaatgcaaaggctgtaccagcaggaaatcaagtatgcaagaccccaagtttcagtaat
gttcctcagccctgtgtttccagtaatgttctccggccgcaaaatacacagatggacaat
gcttcaaatatttccagaagacctgtcagagaagaatattattcttcctttcttggggct
cagcagcgtgatcatagtatttttgttaaagaagtcctaaagtggacttatgaaatgttt
gcaaactgcagccaatacggacctccggatagtctcctgcagtctgtagtagcctctgtt
cccatcaaatttcagggatacaatgactattttaatacgtttttccccttgatgatgcta
aatgcctttgaaacactggcacaagactggttagaaagccagagaatgagagagaggagt
tactacttccacttgcaaaacttctgtgctgacttgaaaagagcagattttatagctcac
attcgagaaagtgatttggcaaggcagcttcacccaaaggaggatgatttaatctttttg
gtagtccaagagagaaacgcctttggggaagaaagcgaggtggtgaaccatctagtgaag
cacgtgggtcttgtgacacgattttcgcgtgcatctggcagttcagctagacaaaatgag
cagcatcctgtctgtcatctctctgtgcaaactcaaggcaatttgtcatttttcataaat
aagcaagtgaaatgtgtggtggttggctccctagtaaccacacagcgaacgttcaaaggt
ctgctactactgagcaggagtcccctggctaaacccatcataaacccaagttacaatgac
ttctgtcccagagatttgcacatagcttcagaaagtgctgcttatataaaagaatacaat
gaagatcaaaagagagccatcgatactgcttatgccattgtaaaacagcatccaggactt
cccaagatctgcctcatacatggaccacctggaacagggaaatcaaaaactattgttgga
cttctgtctcgtgttttgagagagaacactaggaatgagaaaagaactcaaaaactaaat
tccaagatcaagccaaaccgttttctagtttgtgcaccatccaatgctgctgttgatgaa
ctcatgaaaaagatcatcgttgaatttaaggaaaaatgccaaaacagacaggatcctttg
ggaaactgcggtgatatcagattagtgcgactgggtgcagaaaaatcaatcagcagtgaa
gtacgtggatttagcctggataagcaagttgaacatagaatgaaacgaaaacttcctaac
catgaccagggtattcagaagagaaaagaagctctagatcaaaagctggacatgctgtct
cgtcaacgtgccatgcatagatgtgagaagagggacataaatcaaatgttagatgatgaa
attggcagactttcaaaggagagacaacagcttgcttctcaactaaaggaggttcgggga
tgctcccagagagtacaggcagaaatcatcttggagtctgacatcatctgctgcacactg
agcacaagtggagggactctgctggaatctgctttttggcggcaaggacttgatccgttc
agctgcgtcattgtggatgaggcaggacagtcctgtgaggttgaaacactcattccactg
attcatcgctgtaataaacttgtccttgttggagatcccagacagctccctcctactgta
aaatcgcagaaagctcaggactatggctatgatcatgcagcagaatntgatcagtccttg
atggcacgcctgcacagacacctggaagcacaagtgcagcagaacatcttaagaagtctg
ccagtcgtgcagctgactgtgcagtacaggatgcaccctgacatctgcctcttcccctcc
aattacgtttatggcagaagtctgaagactgacaagtga
DBGET
integrated database retrieval system
