Apteryx mantelli mantelli (North Island brown kiwi): 106485878
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Entry
106485878 CDS
T04298
Symbol
TRIP12
Name
(RefSeq) thyroid hormone receptor interactor 12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106485878 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aam04121
]
106485878 (TRIP12)
Enzymes [BR:
aam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106485878 (TRIP12)
Ubiquitin system [BR:
aam04121
]
Ubiquitin ligases (E3)
HECT type E3
106485878 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
Maestro_HEAT
Motif
Other DBs
NCBI-GeneID:
106485878
NCBI-ProteinID:
XP_013799790
UniProt:
A0A8B7ILM2
LinkDB
All DBs
Position
Un
AA seq
2024 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRGCSSSAVIIPQQEDPERVNTSEKQKTG
QVPKKDNSRGVKRSASPDYSRTNSPSSAKKPKALQHTETSLETSKPHTKSKKRHLDQEQL
KCAQLPSTSKAHTRKGGAAGSSRSQKRKRTESPSCIKSASAVESTGAEERSAKPSKLASK
SVTSAKAGCSTITDSSSSASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPS
PRRSSRDKEQSKTGGSSKFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLAS
LRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDN
NQDGVNSSAARTDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHL
FGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGG
FPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQC
IDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPD
EFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQL
LVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQID
LVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPY
NRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNT
SGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYF
ADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMH
QVKNLAESEALLTSPPKVCTNGSGTLSTTTTISTGTATAASNAAADLGSPSLQHSREDSL
DLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPK
TWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSE
NMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLL
LYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQ
MEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVK
IDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYI
GDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGN
KDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPS
LDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIP
TWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDR
KKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLG
LWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAI
MDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQ
TKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFW
ALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHG
YTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTEN
PDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaagaggctgtagttcatctgctgtt
ataataccacaacaagaagatccagaaagagtcaatacttcagaaaagcaaaaaacgggg
caagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagattacagc
aggaccaattctcccagctctgctaaaaaacccaaagcacttcagcacactgaaacttcc
ttggaaactagcaagccacatactaaatctaagaagagacacttagaccaagaacagctg
aagtgtgcacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgctggt
agctcccgaagtcagaaaaggaaaaggacagagagcccatcttgtataaagagtgcttca
gcagttgaatcaactggcgctgaagagaggtcagcaaaaccctccaagctggcttcaaaa
tcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttcagcttcc
acatcctcctcctcttctgctgttgcctctgcttcctccaccgttcctcagggtgccaga
gtaaaacaaggaaaggaccagaataaggctagacgttcccgttctgcatccagtcccagt
ccaagaaggagtagcagggataaagaacagagtaaaacaggtggctcttcaaagtttgac
tgggctgctcgcttcagcccgaaagttagcctgcctaaaacaaaactgtctctaccaggc
tcttccaagtcggagacatcgaaacctggaccttcaggactacaggcgaaactagcaagt
ctacgaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagtttgcgg
cggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggctctggc
ctgggcaaaagaggagcagctgaagctcgccgacaagagaagatggctgatccggataac
aaccaggatggagttaactcttcagctgcgcgtacagatgaggctccccagggagctgca
gcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagtgagtcagat
gactctgagatgggaagactacaagctctgttagaggctaggggtctccctcctcacctg
tttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagtggagct
agttctaaagcccaacagcttctacaaggtctccaagccactgatgaaagtcagcaactg
caggcagtgattgagatgtgccagctgttggtcatgggaaatgaagaaacattaggagga
tttccagtcaagagtgttgtaccagctttgataacattgctgcagatggagcacaacttt
gacattatgaaccatgcttgtcgggccttaacgtacatgatggaagcacttcccagatca
tctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaggttattcagtgc
attgatgtggcagagcaggcactgacagccctggagatgttatcgcgcagacatagtaaa
gctattctgcaggcaggtgggttggcagactgcttgctgtatctggaattcttcagcata
aatgcacagaggaacgcgctagctattgctgctaactgctgccagagtataacacctgat
gagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccatcaggat
aaaaagtccgttgaaagcacttgtctctgttttgcacggctagtggacaacttccagcat
gaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatccagcaactc
ttggtagtgactcctcctatcctgagctcaggaatgttcatcatggtggtgcgcatgttt
tccttaatgtgctccaattgtcctacacttgcagtgcaacttatgaagcaaaatattgca
gaaacgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaaattgac
cttgttccacgaagtcctcaagaactttatgagcttacttctcttatttgtgaactgatg
ccttgtctgccaaaagaaggaatctttgctgttgatactatgctaaagaaaggaaatgcg
caaaatacagatggtgcaatatggcaatggcgagatgacaggggtctttggcatccctat
aacaggattgatagtcgaataatagaggcggctcatcaggttggtgaggatgagataagc
ctgtctacacttgggcgtgtctatactattgattttaattctatgcagcaaataaatgag
gataccggaacagcacgtgccattcagcgaaaaccaaaccctttagccaatacgaacact
agtggacattcagaactgaagaaggatgatgctcgagcccagctaatgaaggaggaccca
gagttggctaaatcctttatcaaaacattatttggtgttctttatgaagtatatagttct
tcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatttatttt
gctgatgctgaacttctgaaggatgtcctgaaaaaccatgctgtttcaagtcacattgcc
tctatgctgtcgagtcaagaccttaagatagtagttggagcccttcagatggcggagatc
ttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtgatgcac
caagtgaaaaacttagcagagtctgaagctttgctgacaagcccaccaaaagtatgcact
aacggatcaggaacgctgagtaccactacaacaataagcactggaacagccactgctgcc
agtaatgcagctgcagatttgggctcccccagcttgcaacacagcagggaagattctctg
gatttgagcccgcaaggacgactgagtgatgttctgaagagaaaaagactgccaaaacga
gggccaaggagaccaaaatattctcctccaagagatgatgataaagtagacaatcaagct
aaaagccctacaactactcaatctcctaaatcttccttcttggcaagtttaaatcctaaa
acatggggaagattaagcacacagtccaacagtaataatattgaaccagcacgaacagca
ggagttagtggtcttgcaagggctgcttccaaggataccatttccaataacagagaaaaa
attaagggctggattaaggagcaagcccataaatttgtagaacgttattttagctctgaa
aacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgcaactgaa
caactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagcattgtc
tcggagtctgacgtctcctcatttgaaatccagcacagtgggtttgtgaaacaactgctg
ctttatttgacatccaaaagtgagaaagatgctgtaagcagggatatcagattgaaaaga
tttcttcatgtatttttttcttctccactccctggagaagaaccccttggaagattagag
ccattagaaaatgcacctttgttggcgttagtccacaaaatgaataattgcctcagccag
atggaacagtttccagtcaaagtacatgacttccctagtggaaatggaacagggagcagt
ttttctcttaacagaggatctcaagctttaaaattcttcaacacacatcaattaaaatgc
caactgcaaagacatccggactgtgctaatgtgaaacagtggaagggcggacctgtgaag
attgatcctctggctttggtacaggccattgaaagataccttgtagttagaggttatggc
agagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaatagatgaa
tctttggctgctcaattcttaaattcaggtaatgtgagacacagactacaattttacatt
ggggatcacttgctgccgtataatatgactgtgtatcaagcagttaggcagtacagttta
caagctgaggaggagagggagtctacagatgatgaaagcaacccgctgggaagagctggg
atttggacaaaaacgcataccatttggtacaaacctgtgcgagaggatgaagatggtaat
aaggactgtgttggtggtaaaagaggaagagcacaaactgctcctacaaaaacctcccct
agaaattctaaaaagcatgatgagttgtggcatgatggtgtatgcccttcggtattaaat
cctttagaagtttacctcatatctactccacctgaaaacataacatttgaagatccatca
ttagacgttattcttcttttgagggttttacatgctatcagtcgatattggtattacctg
tatgataatgcaatctgcaaggagattattccaacctcggaatttatcaacagtaaactg
acagcaaaagcaaacaggcagctccaggaccctttggtcatcatgacggggaacatacca
acgtggctgacggaacttgggaaaacatgcccgtttttctttccatttgatactcgacaa
atgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactggatact
aatccagaaatcaatcaatcagactctcaggatagcagagtggcaccaagactggacagg
aaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcaggat
ctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcacaggccta
ggccccacactagagttctatgcacttgtatctcaggaactacagagagcagacttaggc
ctctggaggggagaagaagtaacattagccaatccgaaaggaagtcaggaaggaaccaag
tatattcataaccttcaaggccttttcgcacttccctttggtagaacagccaagccagct
cacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaaggccatc
atggattttagactggtggaccttcctcttggacttcctttttataaatggatgttacga
caggagacttccttgacatcacatgacttgttcagtattgatccagtagtagccaaatca
atatatcatcttgaagatattgtaagacaaaagaaaagacttgaacaggacaaaacacag
accaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctcagtggaa
gatctagggctggacttcacgcttcctgggtttcctaatatagagctgaaaaaaggggga
aaagatataccagtcaccatccacaatttagaggagtatctcagattggttatattctgg
gcactaaatgaaggtgttgccaggcagtttgactccttcagagatggatttgaatctgtc
ttccccctcagtcatcttcagtatttctatcctgaggagctggagcagctcttgtgcggc
agtaaaacggacacttgggatgcaaagacattgatggaatgttgcaggccagatcatggt
tatacacatgacagtcgagcagtgaagtatctcttcgaaattctcagtagttttgatagt
gagcagcaaagactgttccttcagtttgtgaccggtagccccagactgcctgtaggaggc
ttccgaagtttgaatcctccattgacaattgtacgcaagacattcgagtctacagaaaat
ccagatgacttcttgccctcagtaatgacttgtgtgaactatctcaaattgccggactat
tcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcagcagtca
ttccatctttcctga
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integrated database retrieval system
