Apteryx mantelli mantelli (North Island brown kiwi): 106486208
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Entry
106486208 CDS
T04298
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat containing 6A
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106486208 (TNRC6A)
03036 Chromosome and associated proteins [BR:
aam03036
]
106486208 (TNRC6A)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106486208 (TNRC6A)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106486208 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106486208
NCBI-ProteinID:
XP_013800198
UniProt:
A0A8B7IRH7
LinkDB
All DBs
Position
Un
AA seq
1954 aa
AA seq
DB search
METNITFCSRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKK
KKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTVTSTNNNAKRATANNQQQQTLPR
YPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTVTNKQPVTNGEVP
NSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGS
DKEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGENDGIRNGIGHGSQNK
FVVGSNSNNVGNGSINGPWGLSHGTLISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNG
GLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNSGTNIQCSTIGQISNNQSINSKVGGS
AHGSWGSLQENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQINE
LPNNTGHGAWRVSTMNHSQIQASPVTNGTSISHLSNGEAKSGGSYGTTWGAYGSNYSGDK
CSGPNSQANGDTVNATLMQPGISGPGSTNFQINGNKGGGVWEAGTVNSQNMPWGSGNGAS
AGGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNESVNGNSRKFTNGWKSTEEDDLNSQS
SAASQITEQNSAWAKTGTGDSEGSTESTGCHEDRATTEGQTRERRKVDQHALLQSIVNRT
DLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPS
PNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWN
DAQKIKQGWVDGQKASQGWAVSASESWGESSRNNHWGEAKKSSSGGSDSDRSVSGWNEPG
KSNSVTWGGSNTNPNNSSGWDEPAKSNQNQGWGDPPKSNQPQGWGDSSKPINSPEWNKQD
VGSWGAPSATNKPPGSGWLGGPMPTPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPS
KYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLSSSAMSSKESSSGSGWGEPSTPATTVDN
GTSAWGKPMDTGTSWGEPISDAAGTSGWGNASLGQQASNKPGPKSMQDSWCGDDMPLTGS
RQTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGIMKGGNKQDETWINPFIKQ
FTNLSFSRESPEETIQSNKMDMSGGILQDKRMEMDKHGLNVGDYNRVVGKGPGSRPQISK
ESSMDRGPYFDKDGIVADESQNMQFMSNQNMKLPPSNSALPNQALGSLAGLGMQNLNSVR
QNGNPSMFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNNG
GLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQNQRSMPSGGRQQQEQQGRSL
SMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMKSFLENVIPHATPELQKGPSPINA
FSSFPIGMNSNLNVNLDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLE
ESPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPE
TDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSS
TAQSTSARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQKPPLSTW
DNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLI
TFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQSLTP
SPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSPNYSTSL
WGTPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaacatcactttctgttccagagaattggaagctaaagctaccaaagaagtt
gaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagacaagaag
aagaaggaagctgctcagaaaaaggccattgaacaaaaaatcaaagtgccagaacaaaca
aagacaagtgtaagccagcctcagcctgtcacctctaacggcacttccacagtaaccagc
actaataataatgccaagcgggccacagccaacaatcagcagcagcagaccttgcctcga
taccctcctcgtgaagtaccaccacgatttcgacaccaggaacagaaacagcttctgaaa
cgaggtcagcagttaccagttatagctgcaaacctgggatctactcctaaagtattaaac
ggccaatcgggaggcagtactgtcacaaataagcagcccgtgaccaacggagaagtgccg
aacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcccct
aaccagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactgggga
ccagtctcttcaaatagtgactccagcacaaactgggataaagttattgtagacggctct
gacaaagaagcatggccatcaatcactggcagtgacccagagttgacatcagaatgtatg
gacactgactctgcctctagctctgggtcagagagaaaccttgttataatggcttcaggg
agcacaggtggtgaaaatgatggcattcgaaatggcattggacatggttctcaaaataag
tttgtggttggtagcaacagcaataatgtgggcaatggaagtattaatgggccgtggggt
ttatcccatggaaccctaataagcacatgtcaagtttctgtggatgctcctgacagcaaa
tctgaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatcaaatgga
gggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggcctgtattggag
aacaatggacatgccctgaaagggtctgtagggagtggtaattctggcacaaatattcag
tgcagtaccataggtcagatatctaataatcagagtattaactctaaagtgggtggttca
gcccatggttcctggggaagccttcaggaaaattgtgattctgaagtaaatggtacaagg
aaggtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataac
actactaactttatgacctctagtttaccaaactctgctggttcagtgcagattaacgaa
ctgcctaataatacagggcatggggcctggcgtgtgagcacaatgaatcattctcagatt
caggcctctccagttacaaatggcacttccatttctcatcttagcaatggtgaggcgaaa
agtggtggatcttacggtactacatggggtgcctatggttctaattactctggagacaaa
tgttcaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatgcagcca
ggcattagtgggcctggcagcactaactttcaaatcaatgggaataaaggaggaggggtt
tgggaggcagggacagtcaactcccagaatatgccatggggaagtggaaatggtgcaagt
gctggcggaagcagaagaggatggggcaaccctgcacaaaacactggcactaacatttca
aatggggaatggagtaaactgcctagtaatcagcattccaatgaaagtgtaaatggaaat
agtaggaagtttacaaatggatggaaatctactgaagaggatgaccttaacagccagagt
tctgctgcatctcagataactgagcagaacagcgcatgggccaaaacaggtacgggggat
agtgaaggtagtacggagagcactggatgccatgaagacagagcaactacagaaggacag
acccgagagagaagaaaagttgaccagcatgcattactccaaagtatagtgaacagaact
gacttagatccacgtgtcctttccaactctggttggggacagactccaatcaaacagaac
actgcctgggataccgaaacatcaccaagaggtgaaagaaaaactgacaatgggacagag
gcctggggaggctctgtgacacagacttccagctcagggggatgtgtggatagacctagc
cctaataataatgatacctcatctgtatcagggtggggagatccaaagtctgctacaagg
tggggagactccaaagggtcaaacagccaaggggggtgggaagaggattctgctgctaca
gtaatggtcaagagcaatcaatcgtggggaagtggcaaagaggaaaagtcatcttggaat
gatgcacagaaaatcaaacagggatgggtagatggacaaaaggccagccagggttgggca
gtttctgccagtgagagctggggagaaagttcaagaaataaccattggggtgaggccaag
aaatccagttcaggaggtagcgacagtgacagatcagtatctggttggaatgagccaggt
aaatcaaattctgttacttggggaggcagtaatacaaacccaaataattcgtcaggatgg
gatgagcctgcaaagtctaatcagaatcagggctggggagaccctcctaaatccaatcag
cctcaaggttggggggattcatcaaagccaatcaactctccagaatggaacaaacaagat
gttggatcttggggagcaccatctgccaccaataaaccaccaggatcaggctggttggga
ggaccaatgccaacaccagcaaaggaggaagaacccaccggctgggaggagccatcccct
gaatcaatacgccgtaaaatggaaattgatgatggaacttctgcttggggtgatccaagc
aaatacaactacaaaaatgtgaatatgtggaataaaaatgtcccaaacagtagcagcagt
tcagaccagcaagcacaggtacatcagcagctactgtcttcaagtgccatgtctagcaag
gagagcagttctggttctggttggggagagccctctactccagccactactgtagataat
ggaacttcagcgtggggtaaacccatggatactggtactagctggggagaacccatcagt
gatgcagcaggcacctctggctggggaaatgcttctcttggtcaacaggcttcaaataaa
cctgggcctaaatctatgcaagatagctggtgtggagatgatatgccattgacaggcagt
cgtcagaccagctgggaggaagaagaggatgtagagattggaatgtggaatagcagttca
tcacaagaagctaacccatctttaaattggccaccatatatgaaaaaaatgcctacaaag
ggaataatgaaaggtggaaataagcaagatgagacatggattaatccattcattaagcaa
ttcacgaatctcagtttttcaagagaatcaccagaggaaaccatacagagcaataagatg
gacatgtctggagggatattgcaagataagcgaatggagatggataagcatggcctgaat
gttggagattacaatcgtgttgttggaaaaggccctggttctcgtcctcagatttccaaa
gagtcttccatggatcgcggtccttattttgataaggatggcattgtagcagacgagtcc
caaaacatgcagtttatgtccaatcaaaacatgaagcttcccccttcaaatagtgcacta
cctaaccaagcccttggctccctagcagggctgggtatgcaaaacttgaattctgttaga
cagaatggcaatcccagtatgtttggtgttggtaatatagcagcacagcccaggagcatg
cagcagcctccagcacaacctcttaattcatctcagcctaatccacgtgctcaagtgcct
cctccattactttcccctcaggttccagtatcattactgaagtatgcaccaaacaacggt
ggcctgagcccactttttggcccacaacaggtagccatgttgaatcaactgtcccagtta
aaccagctttctcagatctcccagttacagcggttgttggctcagcagcaaaaagcgcag
aatcaaagaagcatgccttctggtggtcgtcaacagcaggagcagcagggtcgatctctt
agtatgcagcaacagatgatgcaacagtcccgtcagcttgatccaaacctgttaatgaag
cagcaaactccaccctctcaacagcagtcactccatcaacccaccatgaaatctttcctt
gagaatgtcataccccatgctacccctgagctgcaaaaagggccatcaccaataaatgcg
ttcagcagcttccctataggaatgaactcaaacttgaatgtaaacctggatatgaacagt
attaaagagccacaatctcgactgaggaaatggactacagtagacagtatttctgtgaac
acgtcgttagatcaaaactccagcaaacatggtgctatttcaagtggttttaggctggaa
gagtctccatttgttccatatgactttatgaacagcagtaattcaccagccagtcctcct
ggatctattggggatggctggccccgtgccaaatcgcctaatggctctagcagtgttaac
tggccaccagaatttcgtcctggtgagccatggaaaggttatccaaacatcgaccctgaa
actgacccttacgtcactcctggcagtgtcataaacaatctttcaattaacactgtgcgg
gaagttgaccacctcagggacaggaacagtgggtcatcctcatctttgaacaccacgctg
ccttcaactagtgcctggtcatccattcgtgcctccaactacaatgtttccctcagcagt
acagcacaaagcacttcagccagaaacagtgattccaaatcaacatggtctcctggatca
gtcactaacacctctctggctcatgagctgtggaaggtccctttgccacctaaaagcatc
actgctccgtcccgcccacctccagggctaaccggccagaaaccacctttatccacttgg
gataactcccttcgcttgggtggaggatggggaaattctgatgccagatatacccctggt
tcaagctggggtgagagcagctcagggagaataacaaattggcttgttctaaaaaacctt
acacctcagattgatggctcaaccctgcgtactctgtgcatgcagcacggtccactaata
acattccaccttaacctcccacatggtaatgctttggtccgttacagttcaaaagaagag
gtagtgaaggcacaaaaatctctgcacatgtgtgtattagggaacactactattcttgct
gagtttgccagtgaagaggagattagtcgcttctttgcacaaggccagtctctgactccg
tctcctggctggcaatctcttggatccagccagaaccgacttggatccattgacggttcc
cattcgttctcaaaccgtaatgatctaaatcactggaatggtgctgggctgtcgggaact
agcagtggagaccttcatggcacttcactttggggaagccccaactattccacgagcctg
tggggcaccccgagcagcaatgacaccaggggaattagcagcccatcccccatcaacgct
ttcctttctgttgaccacctaggtggaggtggagagtccatgtaa
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