Apteryx mantelli mantelli (North Island brown kiwi): 106486347
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Entry
106486347 CDS
T04298
Symbol
SHOC2
Name
(RefSeq) SHOC2, leucine rich repeat scaffold protein
KO
K19613
leucine-rich repeat protein SHOC2
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106486347 (SHOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106486347
NCBI-ProteinID:
XP_013800377
LinkDB
All DBs
Position
Un
AA seq
469 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKEGKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLNSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaagactgcaaagagaaggatccaaaagtcccatcg
tcaaaagaaagggagaaggaggccaaagcctctggagggtttgggaaagagggcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagccttttcagtggacaatacgataaaacgacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatcagctgtcaaa
gagttaacgcaattaacggaactttatttatacagtaacaaattgcagtctctgccagcg
gaggtgggctgtcttgtgaacctggtgacactggccctgagtgaaaactcactcaccagt
ttgcctgactctctcgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
cttagagaaattccctcggtggtgtataggctaaactctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagttgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccggaaaccata
ggaaatctgtccagtctaagtcgtcttggcctaaggtacaacaggctgtcggcaattccc
aagtccttagcaaaatgcagtgaactcgatgaactgaacctggagaacaacaacatttct
actttaccagagggtcttttatccagtcttgtcaaattgactagtttaacactggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagtt
ttaagtaagctgaacatgaaggacaatcagctgacctcactgcccttggacttcgggact
tggactagtatggtagaactgaacctagctactaaccagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggacaatcagctgacctcactgcccttggacttcggg
acttggactagtatggtagaactgaacctagctactaaccagctcacaaaaatccctgag
gatgtatctgggcttgtttctcttgag
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