Apteryx mantelli mantelli (North Island brown kiwi): 106486806
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Entry
106486806 CDS
T04298
Symbol
SHPRH
Name
(RefSeq) SNF2 histone linker PHD RING helicase
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aam04121
]
106486806 (SHPRH)
Enzymes [BR:
aam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106486806 (SHPRH)
Ubiquitin system [BR:
aam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106486806 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PEP-utilisers_N
zf-RING_5
TPR_12
WW
TPR_2
TPR_10
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
106486806
NCBI-ProteinID:
XP_013800914
UniProt:
A0A8B7IRB6
LinkDB
All DBs
Position
Un
AA seq
1695 aa
AA seq
DB search
MSSRRKHAPPSKVDEEKKKQLCWNMHEDRRNEVITLDDDMTDEDSLPGPGTSSVSFVVIN
DDSVDEDLIQKEHSGSKSVTFLTTNVEEDSCSTLTPVSVQLNIIVLPYREDASWKVLLGE
LALHLPPEQSLTEEFHERSFTLMRGDSDDQLQICVHARSEEENNNETKEYLGAYERSILV
EPSLGGEILEGLRWLQKKKIIGLYQRPREAQTLKVGIHLLETGLSKPEFLSDGGGRPKKA
NQLIQKLMEKFYSFIIPDVLDEDDEESDMELERQNIEELYDFVRRTHQQDIQLLREDVQH
PALIPILRPYQSEAVNWMLHRENFISTPSSENALHFLWREVITPDGAKIYYNPFTGCIIR
EYPIAGPQWPGGILADEMGLGKTVEVLALILTHTRQDVKQDVLTLPEGKLVNFFVPPQPL
EGNKKKKTKKLELKLKEKIQYPSLRVMILAAVKEMNVKKGASIIAIFKYISAIYRYDVQR
NRRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKRRERTKEQIAKTSARIQKYL
TDAKTQIKESRNSDVASENVLKTPLRADITTEHDYCTTSKSNRKSEADHDNSVKENNVQQ
EAGGTKSSDLHGNLLVSGDTSSHPDFDVSKSTADVQQDIRKDQSSDSQEHPGSSVQHTSS
VFPFNTSEYRFECICGELGLVDYKARVQCLKCYLWQHAECVNYKEENLKIKPFYCPHCLV
AMKPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEVV
ITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTT
AKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRKN
PQPLYSLIAKIMWRSAKKDVIDQIQIPPQTENVHWLHFSPVERHFYHRQHEVCCQDALAK
LRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSL
QKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQR
LHSTHNLMELLLAKHPGIPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVLQTI
RELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEITSNYKQQTNKLSMADKFHDCRG
LQYLLTTQLDEVKKFQKIVREAVKNLEGPPSKQIIEAATICHLRPVRLPLNNCVFCKADE
LFTEYESKLFSHTVKGQMAIFEEMIEDEEGLVDDRLPTTSRGLWATSETERALKAILSFA
KAHRMDVKLTEEGSMFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPD
EPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGIN
PEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEIS
YVFTAETANQEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIISKAL
YDNNMVFSQINGISRFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNP
AHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLTV
ADLADLFTEETEELE
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtcgaaaacatgcacctccatcaaaagtagatgaggagaagaagaaacag
ctctgctggaatatgcatgaagaccggagaaatgaggtgataacattagatgatgatatg
actgatgaggacagccttccaggtccaggcacttcctcagtgtccttcgttgttataaat
gatgatagtgttgatgaagatctcattcaaaaagagcacagtggttcaaaatctgttaca
tttttgacaactaatgttgaggaagactcgtgctccaccttgactcctgtatcagtacag
ctaaatattatagtcttgccataccgtgaggatgcttcctggaaagttttgctgggagaa
cttgctcttcatcttcctcctgagcaaagtctaactgaggaattccatgaaaggagtttt
actttgatgagaggagactctgatgatcagctgcagatctgtgttcatgcaagaagtgaa
gaagagaacaataatgaaacaaaagaatacttgggtgcttatgaacgaagtattttggtg
gaaccatctttaggtggtgaaatattggaaggcttgagatggctgcagaagaaaaaaata
attggactttatcagagaccaagagaggctcaaactttaaaggttggaattcaccttctg
gaaactggattaagcaaaccagagtttctcagtgatggaggtggaagacccaaaaaagct
aatcagctgattcaaaaactcatggaaaagttctatagttttataattccagatgtgctg
gatgaagatgacgaagaatctgacatggaattagagcgacaaaatattgaagagctttat
gactttgtaaggcgtacacatcagcaggacatccaattactgagagaggatgtgcagcat
cctgcgttaattcctattctgaggccctaccaaagtgaggctgtaaattggatgcttcac
cgggagaacttcataagcactcctagcagtgaaaatgcactgcacttcttatggcgagag
gtcatcactccagatggagcaaaaatctactataatccatttactggctgtattatccgt
gaatatccaattgctggacctcagtggcctggaggtattttggcagatgagatgggtctt
gggaaaacagtagaggtgttggctcttattctgacgcatacccgacaagacgttaaacag
gatgttctgaccttacctgagggtaaacttgtgaacttctttgttccacctcagccttta
gaaggaaataaaaagaaaaaaacaaagaaattggagcttaaattgaaggaaaaaatacaa
tatcccagcttacgagtgatgatactagcagctgtaaaggaaatgaatgtgaagaaagga
gcttccattattgcaatatttaagtatatcagtgctatatataggtatgacgtacagaga
aatagacggcttctcaaaagaactctggaaaaactaattgcagaacaagtagtagaacaa
gtcaaaggccatggtctggctggttctttcaagctgggaaagaattacaaggaacagaag
aggcgagaaagaaccaaagagcagatagcaaagacttcagcaaggattcagaagtacttg
actgatgctaaaactcaaatcaaagaatcaagaaatagtgatgttgcgtctgaaaatgtt
cttaagacccctttacgggcggatatcaccacagaacatgattattgtacaactagcaaa
agtaacaggaaatcagaagcagatcatgacaactctgtaaaagagaataatgttcagcaa
gaagctgggggcacaaagtcttctgatttgcatggtaacctccttgtttccggtgatact
agcagtcatcctgactttgatgtttctaaaagtacagctgatgtccaacaggacattcga
aaggaccagtcctcagattcccaagaacatcctggcagtagtgtacaacataccagttct
gtatttccatttaacacctctgaatatcgttttgaatgcatctgtggtgagcttgggttg
gttgactataaagcccgtgtgcaatgcttgaagtgttatttatggcagcatgcagagtgt
gtaaactacaaagaggaaaatttgaagatcaagccattttactgtccccattgccttgta
gcaatgaaacctgtttccacaggagcaactctgataatttctccgagttctatttgtcat
cagtgggtagatgagatcaacaggcatgtgagatcatcttctcttcgagttctggtatat
caaggtgtgaagaagcatggctttttgcagccacacatgttggcagagcaggaggtagtc
atcaccacatatgatgttctccgcactgaactgaactatgtagacataccccacagtaac
agtgaagatgggcgccgtttcaggaaccagaagcggtacatggccatccccagcccctta
gtagcagtggagtggtggagaatctgtcttgatgaagcacagatggttgaatgcactact
gcaaaggctgctgaaatggcactccgtttaagtggaatcaatcgctggtgtgtcagtggc
actcctgtgcagcgaggattagaagatctgtatggcttagtcctttttcttggagttgat
ccttactgggtcaaacattggtgggaccaactgttatatcgaccttactgtagaaaaaat
cctcagcctctctacagcctaattgccaagataatgtggagatcagcaaagaaggatgtg
attgaccaaattcaaatccccccccagacagaaaatgtacactggcttcacttttctcct
gtggagagacacttctatcatcgccagcacgaggtgtgctgccaggatgccctggcaaaa
ctgaggaagatttcagattggactcttaagcttagtagcctagatagaagaactgtgact
tctattttgtaccctttgctgcggctgaggcaggcctgctgtcatccacaagctgttcgg
ggagagttcttgccattacagaaaagcaccatgaccatggaggaactactaacttcattg
cagaagaagtgtcgaacagagtgtgaggaagctcaccgacagctggtgtgtgctcttaat
ggcttagcgggtatccatatcattaaaggagaatatgcattggctgcagagctgtacaga
gaagtgttgcgttcttctgaagaacacaaagaaaagctcaaaacagattccttacaaaga
cttcattctacacacaatttgatggaattgttgctggcaaagcacccaggaattccacca
actttgcgtgatagccgacttgcagaagaggcagaacaacttcgacagcattatatgagt
aaatccaatgcagaagttgcagaagcccatcaggccttacagccagttctccagacgatt
cgggagctccagagaaagatacattctggttctccatggtggttggatgtcatccagaca
gcaatacaatatgccattgatgaggagcttgttcagcgtgtgcaaaatgagataaccagc
aactacaaacagcaaactaataaactctccatggcagacaaattccatgactgcagaggc
cttcaatacctgctcacaactcaactggatgaagtgaagaagttccagaagatcgtaaga
gaagcagtgaaaaatctagaaggccctccctctaagcagattattgaggctgccactatc
tgccacttgcgacctgttagacttccacttaacaactgtgtcttttgtaaggctgatgag
ttgttcacagaatatgagtcaaagctcttttctcacactgttaaaggccaaatggctata
tttgaagagatgatagaagatgaagaaggacttgttgatgaccgtttacccaccacaagt
cgaggactgtgggcaaccagtgaaacggaacgtgccttgaaagctattctctcctttgcc
aaagcgcaccgaatggatgttaagctaactgaagaaggcagcatgtttctggaactcttt
gaagcgtggaaaaaggaatataagttacttcatgaatattggatggtactgagggatcat
gtgtctgcaattgatgaactagcaatggctacagaacggctgagagtgcgtcatcctgat
gagccaaaaccaaatccaccagttctccacattatagaaccacatgaggtagagcaaaat
cgagtgaaacttttgaatgacaaggcagttgccaaatcacaacttcagaagaaattagga
caacttctgtatctcactaatttggagaagtctcaggataaaactactgggggaattaat
ccagaaccatgcccaatctgtgcacgtcaactgggaaaacagtgggcagtgctgacatgt
ggacattgtttctgtaatgagtgtatagctatcatcatagaacaatacagtgttggcacc
cgccggagctcaattaaatgcgccatttgcaggcagacaacatctcataaagaaatatcc
tatgtctttactgcagaaactgcaaatcaggaggatgatattcctgtaaagggaagtcac
tccaccaaagtggaagctgtggtccgaacactgaagagaattcaatttaaagaccctggg
gctaaatccttagttttctcaacgtggcaagatgtgttggacataatttcaaaagctttg
tatgacaacaacatggttttttctcagatcaatggaattagtagatttcaggaaaatctc
tctgcatttaaatatgatcccaagatcaatattttgctgctgccccttcacactggttcc
aatggattaaacataattgaagcgactcatgttctgcttgtggaacccattctgaatcct
gcacatgagcttcaggctattggcagagtacatcgtattggccaaacaaagtctaccatt
gttcataggttcctgataaaagcaacaatagaagagagaatgcagactatgctgaaaact
gtagatagaagccacacaagctcttccatgaaacagtccgaagcctcagttctgacggtg
gcagatttggctgacctttttacagaggaaactgaagaacttgagtaa
DBGET
integrated database retrieval system
