Apteryx mantelli mantelli (North Island brown kiwi): 106486958
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Entry
106486958 CDS
T04298
Symbol
JMJD1C
Name
(RefSeq) jumonji domain containing 1C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aam03036
]
106486958 (JMJD1C)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
106486958 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
106486958
NCBI-ProteinID:
XP_013801088
LinkDB
All DBs
Position
Un
AA seq
2220 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQ
HQQQRNTRPNKRKGSDSSMPDEEKMKEERYDCIGRGENPKNKNKHFLSKRRKPEEDEKKL
NMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNTSKINGEEGKSQTIEGL
EEQTLTDRQSPWDEIQDDKKREETERLKSSVLDQQEKSSLHAAEQPTSYEQNAKDPHVQE
CSAEKHHTVELKNEQFVPRPPTPKCGVEITNENNSEKENQNNSASTFGLQTVQKIESHGS
DLKQQLANANFLETRKQETDQSWVSNVVNKTDLIQPGVVKTLPVTEHLNPEKEKVPYGSF
MSSLNVASLAEESKLHKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSS
QNSHATGLTRSANKTEHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQ
ETGANHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLSGSSTQTPLSAINTHPL
STASHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPS
PWLHQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHHKEELERKA
FIEPLRSVTTAPIKTELEQSRTQTAKESHMHRHFADPMLNQLPRPPQETGERLSKYKEEH
RRILQESIEVAPFTAKIKALEGERESYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKH
SVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEASNVYVDKQTNCPSTAASPQSLPSYISSL
SKPPPLIKHQPESEGSASKIAEQLSQSVQSHSVTSFRNDSRSPTQLSVSSSNTLRSMPAL
HRAPVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNTGGGKIQELQKPPTLVPEPKEAQT
VYKGISEQNLSEIWKSNNAQNNEKVEWHVERMSGKSQSATASVIVRPPSSTKYDSVPVMQ
SASKDRVSERSSAVTNQTDCLKTAEARETGRVILPNMNSDSTRTQYEKKFPAVSQGSLPS
SVTPTTTMNCSTKTDVTTSAATTTSVSSWGSSEVTYSLSSAVLACAPLECAASRAASQAA
AQAPECKASTAAPVALGGGKAGSAAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNTSET
ESNSVKNQTFSTSLSLDSAIVCNTINKANSVGSGQASQTSQPNYHTKLKKAWLTRHSEED
KNTNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKAKRTY
ESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDAEEEVKPNGVLSRSAKEKS
KLKLQSSSNSTKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSS
RDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQCTTKQS
TQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPPKSETNGNTSPRSDVSTDSKL
TPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDNSESPNCKTSPPASQNN
EQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTPSGKSGRTMPNILDDIIASVVENK
IPPNRTPKINAKSEIKDEPKDDKKCILDDCSKLYNDIQYSWICDKHVLWLRDHKNSNNWK
LFKECWKQGRPVVVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNVKEFWD
GFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPEGKLNLA
SHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVLSK
SGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPE
HDPIRDQSWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVQVTED
FVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEMEDMEEN
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccatactccttaaatggttatagggtgagagtatacagacaggattctgcc
acccagtggtttactggtataattactcatcatgatctcttcactcgcactatggttgtt
atgaatgaccaggtgttagaacctcaaaatgttgatccttctatggttcagatgaccttt
ctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacgccga
aggtctcgttccaaccagaacagcaacacagttcatggtcattatacacgtgcgcaagca
aatagtcccagaccagcaatgaattcccaaactgcagcaccaaaacagaattcacaccag
caccagcagcagcgcaatactcggccaaacaaaaggaaaggctccgatagcagcatgcct
gacgaagagaagatgaaagaagagagatacgattgtattggtcgaggagaaaatcccaaa
aacaaaaataaacacttccttagtaaaagaagaaaacctgaagaggatgaaaaaaaatta
aatatgaagagactgcggacagacaatatctcagattactctgagagcagtgactcagaa
atttcaaataaaagattaacagattcatcctcagagcaaaattcagaaaatgagttaaaa
agcaagaacacttcaaagataaatggagaagaaggaaaatcccaaactattgagggattg
gaagaacagacactaacagataggcaatctccatgggatgaaatacaggacgataaaaaa
cgtgaagagacagaaagactgaagtcatctgtcttggatcagcaggaaaagtcttcactc
catgcagcagagcagccaacatcttatgagcagaacgccaaggatccacatgttcaagag
tgcagtgcagaaaaacatcatactgtggaattaaaaaatgagcagtttgtacccagacct
cctactccaaaatgtggtgttgaaataactaatgaaaacaactctgaaaaagagaatcag
aataattctgcaagtacctttggtttgcaaacggttcagaaaatagaatctcacggcagt
gatttaaaacagcagttagcaaatgcaaatttccttgaaacaagaaaacaggaaactgat
caaagttgggtgagcaatgttgttaacaagacagatttgatacaacctggggttgtgaaa
accttaccagtaactgaacatttaaatcctgaaaaagaaaaagtgccgtatggctcattt
atgtcttcgttaaatgtagcttctctagcagaagaaagtaaactacataaacaaagtcca
gtccctgattctgtgaagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtca
cctgatgttaagcctaaattcacccaatcttctgatactgtgaagtctaaggttagttcc
caaaacagccatgctactggattaacaaggtcagccaataaaactgagcatgatttgcca
aggtctagtttccatccagttccagctagagttagtgctctagaagctactaaaagtcct
cttatcattgacaagaacgaacatttcacagtgtacagggaccccactctgattggacaa
gaaacaggagctaatcacatttcaccttatttgcatcagcataattatccactgcattcc
tcatcccaccgaacctgtttaaatccaaatgctcatcatcctgcattaactggttcatcc
catctgttatctgggtcttcaactcagaccccattgtccgctattaacactcatcctctt
agtaccgcatctcaccattctgttcatcaccctcatctacttcctgcagtgttacccgga
gtgcctaccgcctccttgctgggtggccatccacgactagagactgctcacgctagcagc
ttaagccatttggcattagcacaccagcagcagcaacagatgttacaacaccagtctcca
catcttcttggacaagctcatccttctgcttcctataatcagctagggctttatccaatt
atttggcagtacccaaacggaacacatgcttactcaggactcggtctgccctcctcgaaa
tgggtccaccccgaaactcctgttaacgcagaggcttccttgagaaggaatactccgagc
ccgtggttgcaccagcccacccctgtgacctcagccgacagtctcggtttactgagtcac
attcctgtgagaccatccagcgctgatccccttcggcctctcaagctgacaacgcactct
agtccgcccttgtccaaaagtatagtagagcatcacaaagaagaactggagaggaaggcg
tttattgaacctttacgttccgttacaactgcgcccataaagactgagctagagcaaagc
agaacgcagacagcaaaggagagccatatgcacaggcattttgcagatcccatgttgaac
cagctgccaaggccaccgcaggagactggggagcgactaagcaaatacaaagaggagcac
aggcgaatactccaagaaagtattgaggttgctccttttacagctaaaataaaggcactg
gagggggagagagagagctattccagggtaacatccttatcttcaagtcccaaaagccat
tcagtaaaatatgacaaagatgcagagcgctctgtatcagaactgtataagatgaagcat
tcagtcccacagagtttgccgcagagtaactatttcaccaccctgtctaacagtgtagta
aatgaaccaccaagatcatacccatccaaggaagcttcaaatgtctatgttgataagcag
actaattgtccttcgacagcagctagtccccagtctctcccttcttacatttcttctctt
tccaaacctccccctttaataaagcaccaaccagagagcgaaggctctgcaagcaagata
gctgagcagctttcacagtcagtgcagtctcactcagtaacttcttttagaaatgacagc
aggagccctactcagctgtcagtctcatcttcaaacacactccggagtatgcctgccttg
cacagagccccagtgtttcaccctccggttcaccagaacctggagaagaaggaaagcagc
tacagcagcctgtcgcctccgactctaactcctgttcaacctgttaacactggtggcggc
aaaatacaggaattacaaaagccgccaactttagtacctgaaccgaaggaagctcagacg
gtttacaagggcatttctgaacaaaacttgtcagaaatatggaagtctaataatgctcaa
aataatgaaaaagtggaatggcacgttgaaagaatgagtggaaagtcacagtcggctaca
gcatctgttattgtacgtcctccttctagtacgaaatacgatagtgtaccagtaatgcag
tcggcttccaaagatcgagttagcgagagatcttcagctgtgacaaatcaaacagattgc
ctgaaaacagcggaagccagagagactgggagagtcattctgccaaatatgaactcagac
agtactcgtacacagtatgaaaagaaatttccagctgtctcgcaaggcagccttcctagc
tctgtcacccccaccacaactatgaactgcagtaccaaaacggatgtaaccacatcagca
gctacaactaccagcgtgtcaagctggggtagttcagaagtgacttactccttatcaagc
gcggtcctggcctgcgcgccgctggagtgtgctgcctcgagagccgccagccaggcagcg
gcgcaggccccggagtgcaaggccagcactgcggctccagttgcactgggcggtggcaag
gccgggagcgctgcgcagcccagctcgggattctccacctcgactgattttgtccacttg
aaaaagcacaaggcagcgttggctgcagctcagtttaaaagtagtaacaccagtgagact
gagtccaactctgtgaaaaatcagacattttcaacctctctctccctagacagcgctatc
gtctgtaatacaataaacaaagcaaactctgtaggcagtgggcaggcttcccagacaagt
cagccaaactaccacactaaactgaaaaaggcttggctaacaagacattcggaggaagat
aaaaacactaataaaaaagagaattcagggaacagtgtttcagaaattattaagccatgt
actgtcaatttaatagcttctacatcaaatgatttgcaaaataacatagatagtaaaatc
ctggcagataagtttgtgaaagaagataagcaccctaggagaaaagcaaaaagaacttat
gagtctggctctgaaagcggagactctgatgaaagcgagagcaagtcagagcaaaggact
aaacggcagcccaagccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaagggt
gatgcagaggaagaagtaaaaccgaatggtgttcttagtaggagtgccaaagaaaaaagc
aagctgaagttacagagcagcagtaatagcaccaaaattgcgtggaagagagcagtgaga
ggagtccgcgagatgtgtgatgcatgcgaagccacattatttaacattcactgggtctgc
caaaaatgtggatttgtggtctgcctggattgttacaaggcaaaggaaagaaaaagctct
agagataaggagctgtatgcctggatgaagtgcgtgaagggacagcctcacgaccacaaa
cacttgatgccaactcaaattattcccggctctgttttgacagatcttctagatgctatg
cacaatattagagaaaaatttgaaattaaatcccactgtcagtgtaccaccaaacagagc
acgcaagctggcaaactccctgcaatgaatggtgtgtctcaggttttacagaatgtcctc
aatcacagtaataaaatttctctgtgcatgcctgagtctcaacagcagaataccccccca
aagtctgagacaaatggtaatacaagtccaaggagtgatgtaagcacagacagcaagtta
acaccacctgaatcacagtcgccactgcattggttagctgatcttgcagagcagaaagcc
agagaagaaaagaaagagaataaagaatgtccttctggaaaacattcaaaggaagaaaaa
gaccaggataattcagagtccccaaactgtaaaacctcccctcctgcatcccagaacaac
gagcagggttcaaccttacgagatttactaactacaacagcaggcaaactgcgtctaggt
tctacagatgcgggtattgcttttgctccagtttactccacaggaacaccaagtggcaag
agtggaaggactatgccaaacattctcgatgacataattgcttcagtggtagaaaacaag
attccaccaaatagaacaccaaagataaatgcaaaatctgaaataaaagatgagccaaag
gatgataaaaaatgtattctagatgactgcagtaaattgtacaatgatattcaatattct
tggatctgtgataagcatgttttgtggctcagagaccataaaaacagcaacaactggaag
ctcttcaaagagtgctggaaacaagggaggcctgtagtagtgtccggtatgcataagaaa
atgaacttcagcttgtggaaagcagagtcaattagtctagattttggaaaccagcaagct
gatatcttgaattgcaaagacagcattatttcaaacaccaatgtcaaggagttctgggat
ggttttgaagatgtttcaaaacggcagaaaataaaaaatggggaaacagctctactaaaa
ttgaaagattggccttctggtgaagatttcaaggctatgatgccagcaagatatgaagac
ttattaaaaagtttacctttgcctgaatattgtagtccagaaggaaaattaaacttggcc
tctcatctgccaggattttttgtccgtccagatttgggacccagactatgcagtgcatat
ggtgtggctgctactaaagatcacgatataggaactacaaatctccatattgaagtttct
gatgtagtgaacatccttgtttatgttggcatagcaaaaggaaatggagtactttccaaa
tcaggagtgttgaagaagtttgaagaggaagatttggatgatcttttaaggaagagattg
aaagattcaagtgaattacctggtgctttgtggcacatttatgctggcaaagatgctgac
aagataagggagtttctgcaaaagatagcaaaagaacaaggcctagaagttttaccagag
catgatccaatacgtgatcagagttggtatgtgaacaaaaaacttcgccaaagacttttt
gaagaatatggagtaaaaacctgtacggttattcagtttcttggtgatgctattattcta
ccagcaggagcacttcatcaggtgcaaaattttcacagctgtgttcaagtaactgaagac
tttgtgtctcccgaacaccttgtacagtcatttcacttaacgcaggaactgaggctgtca
aaggaagaaatcaattacgatgataaactgcaggttaaaaatatcttgtatcatgcagtt
aaagaaatggtgagagctttgaagattcatgaaggggaaatggaagatatggaagaaaac
taa
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