Apteryx mantelli mantelli (North Island brown kiwi): 106487100
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Entry
106487100 CDS
T04298
Symbol
ALYREF
Name
(RefSeq) Aly/REF export factor
KO
K12881
THO complex subunit 4
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03013
Nucleocytoplasmic transport
aam03015
mRNA surveillance pathway
aam03040
Spliceosome
aam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106487100 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
106487100 (ALYREF)
03015 mRNA surveillance pathway
106487100 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106487100 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106487100 (ALYREF)
03041 Spliceosome [BR:
aam03041
]
106487100 (ALYREF)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106487100 (ALYREF)
TREX complex
106487100 (ALYREF)
Spliceosome [BR:
aam03041
]
Complex C
Other components
EJC/TREX
106487100 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106487100 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
RRM_occluded
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
106487100
NCBI-ProteinID:
XP_013801241
LinkDB
All DBs
Position
Un
AA seq
210 aa
AA seq
DB search
MALGHTSTLRHALLLVPTSVAALSEVPVSLQPKQLPEKWQHDLFDSGFGAGAGVETGGKL
LVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNG
VPLDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGGTGGFGGGGGNRRGSRGGSRGRG
RGAGRTSKQQLSAEELDAQLDAYNARMDTS
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcggccacaccagcaccctgcgccatgctctgctgctggtgccaacaagcgtg
gcggctctcagtgaggtgccggtctcgttgcagccgaagcagctccccgagaagtggcag
cacgacctgttcgacagcggcttcggggcgggcgccggcgtggagaccggcgggaagctc
ctcgtctccaatctcgactttggcgtctcggatgcggacatccaggaactctttgcagag
tttgggaccttgaagaaggcagcagtgcactatgacagatctggccgcagtctagggaca
gcagatgtgcattttgaaagaaaggcagacgctctgaaagctatgaagcagtacaatgga
gtccccttggatgggcgccccatgaacattcagctggttacgtcacagatagacacacag
aggagaccagcacagagtgtaaacagaggtggcatgaccagaaaccgtggtggtacagga
ggatttggtggtggaggtggcaacaggcgaggtagtcgtggtgggagcagagggagaggc
agaggagctggaagaacttccaaacagcaactctctgcagaagaactagatgcacagctg
gatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
