KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106487108
Entry
106487108         CDS       T04298                                 
Symbol
WDR7
Name
(RefSeq) WD repeat domain 7
  KO
K24738  rabconnectin-3b
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:aam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    106487108 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aam04131]
    106487108 (WDR7)
Membrane trafficking [BR:aam04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    106487108 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd CFAP251_N WDR55 ASA1 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_NOL10_N DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_Aladin Beta-prop_HPS5 WD40_MABP1-WDR62_2nd PAC11 Beta-prop_WDR19_1st WDR72_alpha-sol WDR90_beta-prop_4th Tricorn_2nd PD40 LRS4 DNAI3_WD
Other DBs
NCBI-GeneID: 106487108
NCBI-ProteinID: XP_013801253
LinkDB
Position
Un
AA seq 1487 aa
MAGNSLVLPIVLWGRKAPTHCISTLLLMDDVSMIVTGCHDGQICLWDLSLDLEINPRALL
FGHTASITCLSKASACSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLLSKISPDWISSMSIIRSNRTQEDTVVAV
SVTGILKVWIITSEVSRMQDTTPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENEQTWTGGDFVSADKVIVWTEDGQSFIYKLPASCLPASDSFRSDV
GKAVENLIPPLLHSVLDRADKQLLICPPVTRFFYGRRELFNKLLIQGDSSGRLCIWSVPD
TFEQQDSAEGLQATTSISLQEAFNKLSPHPAGIIDQLSLIPNINEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKITCLLYPHQVSSRY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPESCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEVVPAAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLAGKRAAVLFQQVKETIKENIKEHLLDDDDEDEESVRQRREDSDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPGYNQSIGKPSYDSVELGRKMSITEGLGKGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPEMSKVKAPPSISSHAAQGQIKQVAPAVSSSTEA
GHSGSDTAPTLHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKETIDAWAPYLPQYIDSVISPGVTTEAMQTGSASPDSLGT
EAKVQEEEHDLVDDDITAGCLSGLPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAID
LVGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITTGLPLSPAADSARSARHALSLIA
TARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVD
LLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIR
TGKCQTIHGHKGPITAVAFAPDGRYLATYSNSDSHLSFWQMNTSLLGSIGMLNSAPQLRC
IKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggccggaaacagcctcgttctgcccatcgtcctctggggacggaaagcccccacgcac
tgcatatccacgctgctgttaatggacgacgtgtcgatgattgtcacggggtgtcacgac
ggacaaatatgtctctgggacctctctttagatttagagattaatcccagagctctgttg
tttggtcatacagcctcaattacttgtttatcgaaggcctctgcttgcagtgaaaagcag
tatatagtgagcgcatcagaaagcggggagatgtgtctgtgggatgtgaatgatgggaga
tgcatagagtttactaaattagcctgtgcacatactggcatacagttttaccagttcact
gttgggactcagcgtgaagggagactgttatgccatggacattatccagaaattcttgtt
gtggatgctaccagccttgaagttctttattccttattatcaaagatatctcctgactgg
atcagctccatgagtatcattcgatccaatagaacacaagaggataccgttgtcgctgtc
tcagtgactggcattctgaaagtgtggataataacctccgaagttagtcgcatgcaggat
actacaccagtatttgaagaggagtctaaacctatttattgtcaaaactgtcaaagcatt
tctttctgtgcgtttacccaacggtcgttgttggtagtgtgctccaaatactggagggtt
tttgatgctggagattattccctcttatgttcagtccctagtgagaatgaacagacctgg
actggtggagactttgtgtcagctgataaagtgattgtatggacagaagatggacaaagt
tttatatacaaattaccagccagttgtcttccggctagtgattcatttcgcagtgatgtg
ggaaaagcggtagaaaacttaattccacctttactgcacagtgtattggacagagcggat
aaacagttactaatatgtcctccagttactcgattcttctatggacgtagagagcttttc
aataaactcttaatccaaggagactcttcagggagactgtgtatttggagtgtgcctgat
acatttgaacagcaggatagtgcagaaggactgcaagcaacaacttcaatatccctgcag
gaagcttttaataaacttagtcctcaccctgctggaattatagaccaattaagcttaata
ccaaacatcaatgaaccacttaaagtgacggccagtgtgtacatcccagcgcacgggcgt
ctggtttgtggtcgggaggatggaagcattgttattgtgccagcaacacaaaccgctata
gttcagcttctgcaaggagagcatatgctcaggagaggttggccacctcaccggactctt
cgaggccatcgaaacaaaattacatgtttactgtatcctcatcaggtttcttctcgttat
gatcaaaggtatttgatctcaggcggtgtggatttctcagtcatcatatgggatatattt
tctggagagatgaaacatatcttctgtgtacatgggggagaaattacacagcttctagtt
ccaccagaaagctgtagtgcaagagtccagcactgtatttgctctgttgccagtgatcac
tcagtaggtcttctgagtttgcgggagaaaaaatgtatcatgctggcatcccgtcacctt
tttcctatccaagtaataaaatggaggccttcagatgactacctggtggtgggatgctcg
gatggatctgtgtacgtctggcaaatggatactggtgcgctggacaggtgtgtgatgggc
ataacagcagttgaaatcctgaacgcttgtgacgaggtggtcccagctgctgtggactcc
cttagccacccggccgtcaacctgaagcaggccatgacgaggcgcagcctggcagctctg
aaaaatgtggcgcatcagaaactccagactcttgccactaaccttttagcttcagaagcg
tctgacaaagggaatctacctaaatattcacataactccctgatggttcaagctataaag
accaacttaacagatccagatatacatgtgctcttctttgatgtagaagcactgattatt
cagctactgacggaagaagcctctaggcctaatactgcacttatttccccagagaacttg
cagaaagcatctggcagctctgacaaaggcggctcttttctggctggtaaacgagcagca
gttctcttccagcaggtcaaggaaaccatcaaagagaatataaaagaacatcttcttgat
gatgatgatgaggatgaagaatcagtaagacagagaagagaagacagtgacccagaatat
cgctctagcaaatctaaaccattaaccttgttagaatataatctaaccatggatacggca
aagctttttatgtcctgtcttcacgcctggggcttgaattctgttctagatgagctttgc
cttgatcgtcttgggatgcttaaaccacactgttctgtgtcctttggcctactgtctaga
ggaggccacatgtctctcatgcttcctggatataatcagtctataggtaaaccgtcgtat
gatagtgtggagttgggaagaaaaatgtccattactgaaggactaggaaaggggacatat
ggtgtatcacgtgctgtcaccactcagcatctcctgtctattatttcactggccaacaca
ttgatgagtatgactaatgcaacttttattggcgatcatatgaagaaaggtccaaccagg
cctcctaggccaggcactcccgagatgtcaaaagtgaaggcacccccttcaatttcaagt
catgcagctcaaggacaaattaagcaagttgctcctgctgtttcttctagcactgaagct
ggtcactctggctctgacactgctcctactttacatacctgtttcttagtaaatgaaggg
tggagccagctcgctgctatgcactgcgttatgctccctgacctgttaggactggataaa
tttagacctcctcttctggagatgctagctcgcaggtggcaggatcgatgcttggaggta
agagaagctgcccaggccttactgttagcagaactgagaagaatcgaacaggcgggtcgg
aaagaaaccattgatgcatgggctccctatttaccacaatatattgacagtgttatatca
cctggagtaacaacagaagccatgcaaacgggtagtgcaagcccagattcattgggaaca
gaagcgaaagttcaggaagaggagcatgatctcgttgatgacgacatcacagcaggttgt
ctgtctggtctcccacaaatgaagaaaatatctacatcgtatgaagagagaaggaagcaa
gctaccgccattgttttgcttggagtcattggagcagaatttggagctgaaattgaacct
cccaaacttctgactcggccacgcagttctagtcaaattcccgagggatttggtttgacc
agtggtggatcaaattattccttggcaaggcatacatgcaaggcgctgacgttcctgctg
ctgcagccgcccagccccaagctgcccgcgcacagcaccatccgccgcaccgccatcgac
ctcgtcggccgcggcttcaccgtctgggagccctacatggacgtctccgccgtgctcatg
gggctgctggagctctgcgccgacgctgagaagcagcttgccaacatcacaacggggctg
ccgctgagccccgcggccgactcggcccgctcggcgcgccacgcgctctcgctcatcgcc
acggcccgcccgcccgccttcatcaccaccatcgccaaggaggtgcacaggcacacggcc
ctggccgccaacacgcagtcccagcagaatattcacaccaccacccttgcccgggctaaa
ggagagatcttgagagtcatcgaaatactgattgagaagatgcctaccgacgtggtggac
ctccttgtggaggttatggacatcatcatgtattgccttgaaggatctttagttaagaaa
aaaggtcttcaggaatgctttccagccatctgcaggttctacatggtcagctattatgag
cggagtcacagaatagcggttggagctcgccatggttcagtggccctctacgacatccgg
actgggaaatgtcagactatccatggccataaaggacccataactgctgtagctttcgcc
cctgatggccggtaccttgccacatactccaattcagacagtcacctctccttctggcag
atgaacacctcgctgctgggcagcatcggcatgctgaactcggcgccccagctccgctgc
atcaagacctaccaggtgccgccggtgcagcccgcttccccgggctcccacaacgccctc
aagctggcccgcctcatctggacgtccaaccgcaacgttatcctcatggctcacgacggc
aaggagcatcgcttcatggtctag

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