Apteryx mantelli mantelli (North Island brown kiwi): 106487246
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Entry
106487246 CDS
T04298
Symbol
RAD50
Name
(RefSeq) RAD50 double strand break repair protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03440
Homologous recombination
aam03450
Non-homologous end-joining
aam04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106487246 (RAD50)
03450 Non-homologous end-joining
106487246 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106487246 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aam03032
]
106487246 (RAD50)
03400 DNA repair and recombination proteins [BR:
aam03400
]
106487246 (RAD50)
DNA replication proteins [BR:
aam03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106487246 (RAD50)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106487246 (RAD50)
BRCA1-C complex
106487246 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
106487246 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_21
AAA_15
SbcC_Walker_B
Muted
AAA_29
NPV_P10
DUF2703
AAA_13
Motif
Other DBs
NCBI-GeneID:
106487246
NCBI-ProteinID:
XP_013801427
UniProt:
A0A8B7IR81
LinkDB
All DBs
Position
Un
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGSSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAREIQDHLSNREAQLAASKEN
VKSIESQLDPLTSSLAAIEQNLMKVMRLDNDIKALESRKKQMEKDNQDLQQKMEKIFQGT
DEQLRDRYQNHQRTVKEKEKRLLDCKRELDRASKECQRFNSEKSELLIERGRLQLQADRH
QEHITMRDSLIQSLAAQLELDGFERAPFNERQITSFHRLLKERQERDIEAASQLMRGFAQ
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGSSDRILELDQE
LVKAEHDLEKAEKNSNVEALELEVQSLQSEKTNLDKVLRKLDQEMEQLNLHTTTITQMEM
LKKDKADKEEQIRKVKSRHSDELTLLLGYFPNKKQLEDWLHGKSKEINQTRDRLAKLNKQ
LASAEQHKNYISIELRKKEEQLSSYEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RREKKRDEMIGLKPIRQTITELQERDIPDLRNKLQTVNRDFTRLKNEIEEQETLLHTVLS
EEEGAKACLQDITLMERYQTDIKDVERKIAQQAAKLLGVDLSRTVLQVSQEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLNATLEKLQQEKEDLINKKTASNKETQEKINDIKEKVKNINNYMKE
IENYILHGKEDYKKQKESELEEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRSEELKEVEDDIKQLIKEMGEMKVLQMKNEQKRLEEKIEDLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEDKYREMMIVMRTTELVNKDLDIYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADESVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagattgagaaaatgagtatcctcggagtgaggagttttggggtggaggataaa
gacaaacaaattatcactttctttaatccattaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatccactggagattttcctcccggc
acaaaaggaagctcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
cagattcgactgcagtttcgagatgttaatggagagctcgtggctgtccagcgatccatg
gtttgtacccagaaaggcaagaaaacagaatttaaaacacttgaaggtgtcattactaga
acaaagcatggtgagaaggtcagtcttagttccaagtgtgcagaaatcgatcgagagatg
atcagcgcccttggtgtttccaagtctgtgattaacaatgtcattttctgccaccaagaa
gaatccaactggcccttaagtgaagggaaggctctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagctttggaaactctccgtcaggtacgactgaaacaaagc
ttgaaagtaaaagagtgtcagacagaactgaaatacctaaaacagaataaagaaaaagca
cgtgaaatccaggatcatcttagcaatagagaggctcagctggctgcttctaaagagaat
gtaaaatctattgaaagtcaactagatcctctaacgagttctctggcagcaattgaacag
aatctcatgaaagtgatgaggctagacaatgacataaaagccctggagagcaggaagaag
cagatggaaaaagataatcaagatctgcaacagaaaatggaaaagatttttcaaggaaca
gatgaacaactcagggacagatatcagaaccaccagagaacagtgaaggagaaggagaag
agattattagattgtaagcgtgaactagatagagcttctaaagagtgccagagatttaac
agtgagaagtcagaactacttattgaacgaggtcgccttcagctgcaagcagatcgtcac
caagaacacataacaatgagggattcattaattcagtcgttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaagacagattaccagttttcacaggttgttg
aaggagagacaggaaagagacatagaagctgcaagtcagttaatgagaggctttgcacaa
aaagaagcaatgaagcaaaaacagatagatgaaataagagataagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgaactgaagaatgta
aaatatgaattgcagcagttggaggggtcttcagacagaattctggagttggaccaggag
cttgtcaaggcagaacatgatctggagaaggctgagaagaacagtaatgtagaagcactc
gaactagaagtacaaagtctacaaagtgagaaaacaaacctggacaaagtacttcggaag
ctggatcaggagatggaacagttaaacctacacaccacaacaataacccaaatggaaatg
cttaagaaagacaaagcagacaaagaggagcaaattagaaaagtaaaatcaagacattct
gatgagctgaccttactgctgggatactttccgaataaaaagcaacttgaagactggctt
catggtaaaagtaaagagattaatcagacaagggatagacttgccaagcttaacaaacaa
ctagcttcagcagaacaacataaaaattatatcagcattgaactaagaaaaaaagaagag
caattgtccagttatgaagcaaaactttttgatgtttgcggaagccaagattttgacagt
gatctgaacaaacttcaagatgaaattgaaaagagctcaaaacaacgagctgtgcttgct
ggagccacagcagtttattcccagttcattacacaactgacagaagagaaccagtcatgt
tgtccagtttgtcaaagggtttttcaaacggaggcagaactgcaagatgtaattagtgat
ctgcagtctaagttgcgtcttgctccagacaaactgaagtcaacggagtcagagcttaaa
agaagagagaagaaacgggatgaaatgataggacttaaaccaattaggcaaactataact
gaactccaagaaagggatataccggacttgaggaataagctacagactgtaaacagggat
tttacacgcctaaaaaatgagatagaagaacaggaaacactcttgcacacagttctgtct
gaggaggagggtgccaaggcatgtttacaggatataacacttatggaaaggtaccagact
gatattaaggacgttgaaagaaaaattgctcagcaggctgctaagctactgggagtcgat
ttaagtagaactgttctacaagtaagccaagaaaaacaagaaaaaaaacacttgtgggat
acagttactggtaaaattgagctaaatcaaaaacttaagcaagaccagcaaaatcagatc
cagcagcttaagagtacagttaatgaacttaaagcagagaaacttcagatttccagcagt
atgcaacgtcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgtagagagatcaaggaagcgaaagaacaggtttttcctttgaatgcaactttagaa
aaattgcagcaggagaaggaggatctaattaataaaaagactgcgagtaataaggaaaca
caagagaagataaatgatataaaagagaaagttaaaaatataaacaactacatgaaagaa
attgaaaactatattctacatggaaaagaagactataaaaagcaaaaggagtctgaactt
gaggaagtaaattctcaattagctgcctgtgagaaacagaaggaaaagataagtaaagag
atggaaatgattcgacaagatattgatacccaaaagatacaagagagatggctagaggat
aatcttactttgaggaaaagaagtgaagagctaaaagaagttgaagatgatataaaacaa
cttataaaggagatgggagaaatgaaagtcctgcagatgaaaaatgaacaaaaacgttta
gaggagaaaatcgaagatctaaaaagaaaccatcatgttgcactgggccgccagcgtgga
tttgaggaagagattgttcgttttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggacaaatacagggaaatgatgattgttatgagaacaacagagctggtgaacaaagat
ctggacatttattataaggctcttgataaagcaataatgacatttcatagcatgaaaatg
gaagaaatcaacaaaataattcgtgatctttggcgaagcacctacagaggacaagatatc
gaatatatagaaattcgttctgatgcagatgagagtgtttcagcatctgataaaagaaga
agctacaactatagggtagtaatgataaaaggagatacggcactggatatgcgaggaaga
tgtagtgctgggcagaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatcctggcactagatgagcctactaccaatctcgatcgagaa
aacatagagtctcttgcacatgccctggtggagataataaaaagccgatcacagcagcgc
aactttcagcttctggtgataactcatgatgaagattttgttgaacttctgggccgttct
gaatacgtggaaacattctacaggataaagaagaacattgaccagtgttctgaaattatg
aagtgcagtgtcagctccttaggttcatatgttcattag
DBGET
integrated database retrieval system
