Apteryx mantelli mantelli (North Island brown kiwi): 106487373
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Entry
106487373 CDS
T04298
Symbol
TAF5L
Name
(RefSeq) TATA-box binding protein associated factor 5 like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106487373 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106487373 (TAF5L)
03036 Chromosome and associated proteins [BR:
aam03036
]
106487373 (TAF5L)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106487373 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
106487373 (TAF5L)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106487373 (TAF5L)
STAGA complex
106487373 (TAF5L)
TFTC complex
106487373 (TAF5L)
SAGA complex
106487373 (TAF5L)
SLIK complex
106487373 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_EIPR1
PEP5_VPS11_N
PROPPIN
Ge1_WD40
WD_LRWD1
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
106487373
NCBI-ProteinID:
XP_013801582
UniProt:
A0A8B7IRP0
LinkDB
All DBs
Position
Un
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNSLEPSDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLHSR
KLKSEPHLVDVSRIRLACDILDDEEEEDDSIGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NSYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaaacgccgt
cagtatgtggactcagaaggtcccttaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggcagagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttt
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaacgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgagcttttctggac
aacaagtacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaatgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctacgccggcgggagctcctcgcgcaacgaaagc
aacagcctggaacccagcgacatgccagcttctattctgcagaacgaggcggccctggat
ttactacaggacagcattaaacgtgtcaaggacgggcccccttccttaacgaccatctgt
ttctatgccttctataacacagagcagttgctgaacactgcagagatctcaccgaatagc
aagctgcttgctgccggctttgataattcatgtgttaagctgtggagcctgcattcgagg
aagttaaaatctgagccccatcttgttgatgtgtcccgcatccgtctggcttgtgacatc
ctggatgacgaggaggaagaggatgacagcataggtacagaaatgaagatcctgagagga
cactgtggacctgtgtatagcacaaggttcctttcagacagttcaggactcttatcttgt
tctgaggacatgtccatcagatactgggacctcggaagttttacaaacactgtgttgtac
caaggacatgcctatcctgtctgggatttggatattagtccctgcagcctgtactttgcc
agtggttcccatgatcgcacagcaagactctggtcatttgatcggacgtacccactgcga
atatatgcaggccatttggcggacgtggactgtgtcaagttccaccccaattccaactac
ttagcaacgggctccacagacaaaactgtgcgcttatggagcactcagcagggcaactca
gtgcgtcttttcacaggtcaccgtggccctgtgctagcgcttgcgttttctcccaatggt
aagtacctggcgtcagcaggtgaagaccagcggctaaagctgtgggacttggcttcagga
actctttacaaagaactgagggggcacacggacaacataacgagccttacttttagccct
gacagtagtttgattgcttcagcgtcaatggataattctgtccgggtctgggacattcgg
aacagttactgcaacgcccctgcagacgggtcttccagtgaactggttggtgtatatacc
ggacagatgaataatgtactgagcgtacaatttatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
