Apteryx mantelli mantelli (North Island brown kiwi): 106487395
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Entry
106487395 CDS
T04298
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03030
DNA replication
aam03410
Base excision repair
aam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106487395 (POLE)
03410 Base excision repair
106487395 (POLE)
03420 Nucleotide excision repair
106487395 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aam03032
]
106487395 (POLE)
03400 DNA repair and recombination proteins [BR:
aam03400
]
106487395 (POLE)
Enzymes [BR:
aam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106487395 (POLE)
DNA replication proteins [BR:
aam03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
106487395 (POLE)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
106487395 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
106487395
NCBI-ProteinID:
XP_013801606
UniProt:
A0A8B7IS09
LinkDB
All DBs
Position
Un
AA seq
2244 aa
AA seq
DB search
TDRLDALFGFERPAEPGERTGWLINMHPTEVLDEDRRLVSAVDYYFIQEDGSRFKVALPY
KPYFYIATQKGCEREVSSFLSKKFQGKISKLETVPKEDLDLPNHLVGLKRNYIKLSFNTV
DDLVKVRKEISPAVRKNRERDQASDVYTSMLSSALAGGSLSTDDEGPSKKVANQMDNIVD
MREYDVPYHIRLSIDLKIHVAHWYNVRYRGITYPPEITRRDDLVERPDPVVLAFDIETTK
LPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDE
AHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKAP
QCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSV
SDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQ
EQEFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLRH
AIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRL
QPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLYP
DGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKLEERVTTICQRENSFYVDTVRA
FRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVM
RKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKS
TNAKKPKVTISYPGAMLNILVKEGFTNDQYQELEDPASLTYVTRSENSIFFEVDGPYLAM
ILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLE
EVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRL
AEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQ
DFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQ
KKINELFTSEGKRQVIANQPQEGTSSSQIGDIEDFGAAKTLQPLVPVANKRKRVPMAEES
QQMSQYLELSQSWREILGPPPAMGTTKEEQLVWLRYHKKKWELQARQRQERRKKRRLEDG
GVVTGGGVIRDTLSKGLSSYLRRTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCI
KLSIPRVFYVNQRIAKPEEGAVYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADL
SAPDIEGVYETQVPLLLRALIHLGCVCMVSRQLVRHLTGREAETFDIEHLEMRSLAQFTY
LEPGSIRHMYLYHSSQGSKALFGLFIPSQRKAAVFVLDTVRSNQMPNLTNMYSSERSALL
EKVGEELLPPDKHTFEVRAETDLKTVCRAIQRLLLGYKDERRGPTLVAVQSNWDLKRLAS
GIPIIEEFPLVPVRVIDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIG
NLPDDISTFGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINN
PGCYSTVCLELDIQSLAVNTVLQSHHISDMEGGSSMSISFDVIQQASLEDMVTGNQAANI
PASYDETALCSNTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALH
RTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAIGYMEYIINSIHSKE
IFHSLTISFSRCWEFLLWMDPANYGGIKGKVHSSIHYGEKNASKSQVLGDDSEEEEEDRE
EEEEDGETNVEDLLENSWNIVQFLPQAASCQNYFLMIVSAYIVAVYHSMKEELRRNAPGS
TPIKRRATSQVSQEALGEMGAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSRNATE
PSDMFPVLPGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAA
QFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSVLPGWVCSNCQAQYDSDSIEMA
LVEALQKKLMAFMLQDLVCKKCHGVKETHMPVYCSCAGDFALTISSQIFMEHINVFQNIA
RHYNMAYLLETIEWLLRTNPQLQQ
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
acggaccggctggacgcgctgttcgggttcgagcggcccgcggagcccggcgagcgcacg
ggatggctcatcaacatgcacccgacagaggtgctggacgaggaccggcggctggtgagc
gctgtggactactacttcatccaggaggacgggagccgcttcaaggtggccctgccctac
aagccgtacttctacatcgctacccagaagggctgtgaacgagaagtgtcctccttcctc
tccaagaagtttcaagggaaaatttcaaagctagaaactgtccccaaagaagatttggat
ctgccaaatcacttggtgggtcttaagcggaactacattaagctatccttcaacacggtg
gatgacttagtgaaggtgcggaaagagatctctcctgctgtgaggaaaaacagagagcga
gaccaggcgagcgatgtctatacatctatgctgtcaagtgctcttgctggaggcagcctg
tccacagatgatgaaggaccctcaaaaaaggttgccaaccaaatggacaacattgtggat
atgcgggagtatgatgtaccctaccatattcgcctgtccattgacctgaagatccatgtg
gctcattggtacaatgtgcgataccggggcatcacttaccctcctgaaatcacccgccga
gatgaccttgtagagcgaccggatcccgttgttctcgcctttgacattgaaactaccaaa
ctccctttgaagtttcctgatgcagagacagaccagatcatgatgatctcctacatgatt
gatgggcagggctatctgatcacaaacagggagatcgtctccgaggatattgaagacttt
gaatttactcccaaaccggagtatgagggtccattctgtgtctttaatgaaccagatgag
gctcatttaatccagaggtggtttgaacacgtccaggagaccaaacctaccatcattgtc
acatacaatggagacttctttgactggccttttgtggaagcaagagcagcagctcatgga
attaatatgtatcaggagatcggatttcagaaggacagccagggagagtacaaagcaccg
cagtgcatccacatggattgtctgaggtgggtgaagagagacagttatctcccagtggga
agtcacaacctgaaagcagcagcaaaagcaaaactgggttatgatccagtggagctggac
cctgaagagatgtgccggatggctacagaggagcctcagactctggccacctattcagtg
tctgatgcagttgctacctattacatgtacatgaagtatgtgcaccctttcatttttgca
ttgtgcaccatcattcccatggagcctgatgaggtgttaagaaaaggttctgggacactg
tgtgaggcactgctgatggttcaggcctatcatgccaacatcatcttccccaacaagcag
gagcaggagttcaacaaacttacagatgatggccatgtgctggactcagagacgtatgta
ggaggccatgtggaagctctggaatctggggtttttcgcagtgacatcccctgccgcttt
aaaatgaatcctgctgcctttgacttcctggtgcagcatgtggagaagacgctccggcat
gctatcgaagaggaggagggtttgccattggatcaagtcaccaacttccaggaggtttgc
gatgaaatcaaagtcaagctgaattccttgaaggatgtccctaaccgaattgagtgtccc
cttatctaccatttagatgtgggggccatgtaccccaacatcattctgaccaacaggttg
cagccctcagcaatggtggatgaggccacgtgtgctgcctgtgacttcaacaagccaggt
gccaattgtcagcgccggatgacttggcagtggagaggagaattcatgcctgcaagccgc
agtgagtatcaccgcatccagcagcaactggagtctgagaagtttcctcctctgtatcca
gatggagcgccccgggcattccacgagctttcccgtgaagaacaggccaagtatgagaag
aagcgactggcagattattgccgcaaggcttataagaagatccatgttaccaagttagag
gagcgtgtcaccaccatctgccagcgagagaactctttctatgtagacactgtacgagcc
ttcagagaccgtcgctatgagttcaaggggctgcataaggtgtggaagaagaagctgtct
gcagctgtggagacaggagatgcctctgaagtgaagcgctgcaagaacatggaaatccta
tatgactccctgcagctggcacacaagtgtatcctcaattctttctatggctatgtcatg
cgtaaaggagctcgctggtactccatggaaatggctgggatcgtctgcttcactggagca
aatattatcacacaggctagggagctgattgaacagattgggagacctctggaactggat
acagatgggatttggtgtgtccttcctaacagcttcccagaaaactttgtcatcaagtca
accaatgcaaagaagcccaaggtgacaatttcctacccaggtgccatgctgaacatcctc
gtgaaggaaggcttcacaaatgatcagtaccaggagctggaggacccagcctctctcacc
tatgtcacacgctcggagaacagcatcttttttgaagtggatgggccatacctagccatg
atactcccagcctccaaggaggagggcaagaagctgaagaaaaggtatgcggtattcaac
gaagatgggtccttggctgaactgaagggatttgaggtgaagcgacggggagagctgcag
ctggtgaagatattccagtcttctgtatttgaggcctttctgaaaggcaccacactggag
gaggtctatgcttctgtagccaaggtggctgattactggttggatgtgctgtacagcaag
gctgccaacatgcctgattcagagctgtttgagctgatctcagagaaccgttccatgtct
cgcaaactggaggactacggggagcagaaatccacctccatcagcactgccaagcgtctg
gcagaattcttgggagaccagatggtgaaggatgcagggctaagctgccggttcatcatt
tctaagaaacccgaaggttctccagtcacagagagggccatcccacttgccatcttccaa
gcagagcccagtgtacggaaacattacctccggaaatggctgaagagcccctcactgcag
gacttcaacatccgagcaattctggactgggactactacattgagcgactaggcagcacc
atccaaaaaatcatcactattcctgcagcactgcagcaggtaaagaacccagtcccacgg
gttcggcaccctgactggctgcacaagaaactcctggagaagaatgatgtgtacaaacaa
aaaaaaatcaatgagctcttcacttctgaaggcaagagacaggtcattgctaaccagccc
caggagggaacatctagctcccagattggtgacatagaggattttggggctgccaagacc
cttcagccattggttccggttgcaaataaacggaagcgggtccctatggcagaggaaagc
caacagatgtcccagtacctggaactatcccagtcctggcgagagatcctgggcccacct
cccgccatgggcactactaaggaagagcaactggtttggctgcgctaccacaagaagaaa
tgggaactgcaggctcggcagcgccaggagcgtcggaagaagcggcgcctggaggatggt
ggggtggtgacaggtgggggcgtgatccgtgataccctctccaaagggctgagcagctac
ctgcgcaggacggcacgcagcatcctggacttgccctggcagattgtgcagattgctgag
accagccagcctggcctgttcaggctgtgggcagtgattggaagcgacctgcactgcatc
aagctgagcatcccaagggtgttctatgtcaatcagcgcattgcgaaaccagaggaggga
gctgtgtacaggaaggtgaacaggatcttgccccgctcaaacttagtttacaatctctac
gaatactcggtccctgaagacatgtaccaagagcacatcaatgaaatcaatgcagacctg
tctgctccagacattgagggagtgtatgagactcaggtgccgttactgctccgagccctg
atccacctaggctgtgtgtgcatggtcagcaggcagcttgtcagacacctcacagggcga
gaggctgaaacttttgacattgagcacctggagatgcgctcgctggctcagtttacttac
ctggagccaggaagtattcgccacatgtacctctaccacagctcccagggcagcaaggca
ctcttcggccttttcatcccctctcagcgcaaagctgcagtgttcgtactggacacggtg
cgcagcaaccagatgccaaacctcaccaacatgtactcgtcagagcgcagtgctctgctg
gaaaaggtgggcgaagaactactgcctccagacaagcacacctttgaagtgcgtgctgag
accgacctcaagacagtctgcagagccatccagaggctgctgctgggctacaaggatgag
cgccggggccccacccttgttgctgtgcagtctaactgggacctgaaacgactggcaagt
gggattcccatcattgaggagttccccttggtccctgtccgagtaatagatgacatcagc
tattcggtcctggactggcagcgccatgcagcccgccgcatgatccgccactacctcaac
ttggacacatgcctatcccaggcttttgagatgagcaggtattaccacatccccattggg
aatctccctgatgacatctccacctttggctctgacctgtttttctcccgccacctccgt
cgccacaaccatttgctgtggctctcacccacggcccgcccagacctggggggtaaggag
gctgatgacaaccgtctagtcatggagtttgatgagagagcctcagtggagataaacaac
cctggctgctactccacagtgtgtctggagctggatatccagagcctggctgtaaacaca
gtgttgcagtcccatcacatcagtgacatggaaggaggttccagcatgagcatcagtttt
gatgtgatccagcaggcatctctagaagacatggtgacagggaaccaagctgccaacatc
ccagccagctatgatgagactgccctctgctccaacactttcaggattctgaagagcatg
gtggtgagctgggtgaaggaaatcacacagtatcacaatgtctatgcagacaaccaggtg
attcatttttatcgctggcttcgctctccttcctcactgctctacgacccggcattgcac
cgcactctacacaacatgatgaagaagcttttcctgcaattagtggctgagttcaagcgt
cttggctcttcagtggtttatgccaacttcaaccggatcatcctgtgcaccaagaaacgg
cgaattgaggatgctatcggctacatggagtacatcatcaacagcatccactcaaaggag
atctttcactctctgactatttccttctcccgctgctgggagttcctgctctggatggat
ccagcgaattacggaggtatcaagggaaaagtgcattctagcatccactatggggagaag
aacgccagcaagagtcaagtattgggtgatgacagtgaggaagaagaggaggacagggag
gaagaagaggaggatggagagacaaatgtggaggacctgctggagaatagctggaacatt
gtgcagttcctcccccaggctgcctcctgccagaactactttcttatgattgtgtcagcc
tacatcgtggctgtgtaccacagcatgaaggaggagctgcggcgcaatgcccccgggagc
actcccattaagaggagggccaccagccaggtgtcccaggaggcactgggagagatggga
gccatgcctggcatgatcactttctcacaggattatgtggccaacgagctcacccagagc
ttcttcaccatcacccagaagatccagaagaagatggctggttcccgtaatgccactgag
ccttcagacatgttcccagtgctgcctggctcctacttgccactcaacaacccagctcta
gagttcatcaaatatgtctgcaaggtgttgtccctggatgccaatataaccaaccaggtg
aacaaactgcgcagggacctgctgcgcctcattgaggtgggtgagttctccgaagcagcc
cagtttcgggacccttgccgctcctacgtgctccctgaagtcatctgcaggaactgcaat
ttttgcagggacttggacctgtgcaaggaccctgccctctcccaggatgggtcagtgctg
cctggctgggtgtgctccaactgccaggcacagtatgactcggattccattgaaatggca
ctggtggaagcgctgcagaagaagctgatggccttcatgctgcaggacctggtgtgcaag
aagtgtcatggtgtgaaggagacgcacatgcctgtgtactgcagctgtgctggagatttt
gccctcaccatttcctcccagatcttcatggagcacatcaacgtcttccagaacattgct
cggcactacaatatggcatatctgctggaaactatcgagtggctgctgcgtacaaacccc
cagctccagcagtga
DBGET
integrated database retrieval system
