Apteryx mantelli mantelli (North Island brown kiwi): 106487539
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Entry
106487539 CDS
T04298
Symbol
THOC2
Name
(RefSeq) THO complex 2
KO
K12879
THO complex subunit 2
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03013
Nucleocytoplasmic transport
aam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106487539 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
106487539 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106487539 (THOC2)
03041 Spliceosome [BR:
aam03041
]
106487539 (THOC2)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106487539 (THOC2)
Spliceosome [BR:
aam03041
]
Complex C
Other components
EJC/TREX
106487539 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106487539 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
106487539
NCBI-ProteinID:
XP_013801757
LinkDB
All DBs
Position
Un
AA seq
1637 aa
AA seq
DB search
MLRLYERGEKLKAVRLSEQEYLNGEKKDCVKILEKFFKEHGQILICFLNSLQLCRTLSEN
KSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDMPSILADVFCILDIE
TSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTX
XXYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDII
LEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSGETPSSLYRVAAVLL
QHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEE
EKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIAVALCQLVHVTTEPL
YRRVGVPKGAKGSPIPSLPNKRAPKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVR
LGKAFMKEVGTAKKFVSDGVVKFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDC
NACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKEN
VKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL
ANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILK
EVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLAL
PLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSI
DVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPV
HDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMP
PNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQL
CIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYG
RFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKW
HYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRP
DLYALAMGYSGQLKSRKPYMVPENEFHHKDPPARNAVAATVQNGPGGAGMPASLSINTAK
LEESTAEETDKLKEKSQGAVKVINKAVNATPKVTTSNGNSASNSKIIKEKEDKEKSGKEK
EKEKKEKTPAATPETKALGKDGKDKPKEERANKDDKAREIKEKTPKSDKEKEKAKKEEKT
SKEEKMKTVVTNIDSKSAAEKEREKEPSRERDVAKDMKSKENAKGGEKMPVAGSLKSPVP
RSETSESEREQKRRKVDTHSSPSHSSTVKDNLSELKDSSAKHYINHTTPTLSKSKEREVD
KKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSE
SPSDSPRSNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDS
TGGKEEKKHHKSSDKHR
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgattatatgaaaggggggagaagctgaaagcagttagactgtcagagcaggaa
tacctcaacggggagaaaaaggattgtgtcaagattctagagaaattcttcaaagagcat
ggacaaattttaatttgctttctaaatagtttgcaactatgccgcactctcagtgaaaac
aaaagccatgataatatgggtttcagagatatccagcaggctttgtatgagcttgcatat
cacgttgtcagaggaaacctaaaacatgatcaagcttctaatgttcttggtgatgttata
gaatttcgggaagacatgccctccattttagctgatgtgttctgcatattagatattgaa
acaagttgtttagaagaaaaaagtaagagggatcattttacccaattggtattagcctgt
ttgtatcttgtatctgacactgtcctaaaggagcgtttagatccagaaacactggagtcg
ttaggacttatcaagcagtctcaacagttcaatcagaaatctgttaaaataaagacnnnn
nnnngttataagcaacagaagtttaatttgttaagagaggagaatgaaggttatgcgaag
ctgattgcagaactggggcaagacttatctggaaatatcactagtgatttaattcttgaa
aatatcaaatctttaataggatgttttaaccttgatcctaacagagttttggatattatc
ctagaagtctatgagtgcaggcctgagtatgatgatttctttgtaccattgatagagtcc
tacatgtacatgtgtgaacctcaaactctctgccatatccttgggttcaaattcaaattt
tatcaggatccaagtggtgagacaccttcctccttatacagagttgctgctgtccttttg
caacacaatctcattgatttggaagatctttatgttcaccttcttccaggggataatgcc
atcatcgaggaacacaagcgggagatagtagaagctaagcaaattgtcagaaaacttaca
atggttgtcttgtcctctgaaaagactgaagaaaaagagaaggaaaaagaaaaggaggag
gagaaaactgaaaagccacctgataatcaaaagcttggtttattggaagctttattaaaa
attggtgattggcagcatgcacaaagcattatggatcagatgcctccattttatgctact
tcacacaagcccattgcagttgccctttgccagcttgtacatgtgacaactgaacctctg
tatcgcagggttggagtacctaaaggggctaaagggtcaccgattccttctttgccaaac
aagagagcaccaaaacaagcagacagttttgaagacttgagaaaggaagtgttcaacatg
ctttgttaccttggtcctcatctttcccatgatcccattttatttgcaaaagtggtgcgc
cttggaaaagcatttatgaaagaggttggaactgcgaagaaattcgtcagtgacggagtg
gttaagtttcagtctgatggaagcaaacaagaagataaagagaaaatggagatcttattt
agctgtttgttgagtattaccgatcaagtattgcttccatctctttctttgatggactgc
aatgcatgcatgtctgaagaactgtggggaatgttcaaaacttttccataccagtaccgg
tatcgtctttatggacagtggaagaacgaaacatacaatagtcacccacttctagtgaaa
gttaaagctcaaaccatagaccgagccaaatatatcatgaagcgtctaacaaaggaaaat
gtgaaaccctctggaagacaaattggaaaactcagccacagcaatcctacaattttattt
gattatattttatcacaaatacagaagtatgataacttaataactccagttgttgattca
ctgaaatacctcacttcactgaattacgatgtcttggcatactgtattattgaagctctg
gcaaatcccgagaaggagagaatgaagcatgatgacaccacaatctcaagctggttgcag
agtctggctagcttttgtggtgcagttttccgaaaatacccaattgaacttgctggttta
cttcaatatgtagcaaaccaactgaaagctgggaaaagctttgatttgcttattttaaaa
gaggtagtacaaaaaatggctggtatagaaattactgaagaaatgacaatggaacagttg
gaagccatgactggtggagaacagctaaaagctgagggtggatactttggccaaatcagg
aacacaaaaaaatcttctcagagattgaaggatgcattattggaccatgatcttgccctt
ccactgtgcctgcttatggctcaacagagaaatggtgtgatctttcaagagggaggggaa
aaacatctgaagcttgtggggaaactgtatgatcagtgccatgataccctggtacaattt
ggtggatttttagcatccaatctaagcacagaggattacattaagcgagtgccttctatt
gatgttctctgtaatgagtttcacacacctcatgatgctgcatttttcctttcaagaccc
atgtatgcacaccatatttcatcaaagtatgatgaactaaaaaaagctgagaagggaaat
aaacagcagcacaaagttcacaaatacattacatcgtgtgagctggtgatggctcctgtt
catgatgctgtgatctctctgcaccttcccaaggtttgggatgacatcagtcctcagttt
tatgctacattctggtctctgacaatgtatgaccttgctgtcccacatagtagctatgac
agagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcct
ccaaataaaaagaagaaagaaaaagaacgttgtacagctcttcaggacaagcttcttgaa
gaggagaagaaacaattggagcatgtgcaaagggttctgcagagactgaaattggagaag
gacaactggcttctggcaaagtctaccaaaaatgagactatcacaaaatttctgcagttg
tgtatatttcctcgctgcattttttcggcaatcgatgcggtttattgtgctcactttgta
gaactggtgcatcagcagaaaacacccaacttctcgacacttctctgttatgatagagtt
ttctctgatattatatatacagtagcaagttgcactgaaaatgaagctagtagatatggc
aggtttttatgctgtatgttggagaccgtgactagatggcacagtgacagagtcatatat
gaaaaggaatgtggcaactatccaggcttcctcactatattacgggcaactggatttgat
ggtggaaataaagctgatcagttggattatgagaattttagacatgtggtacacaaatgg
cattataagttaactaaggcttctgtacactgccttgaaacaggtgaatatacacatatc
agaaatatcctgattgtgctgaccaaaatccttccgtggtatccaaaagtattgaacctg
ggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacct
gatctatatgcattggctatgggctattctgggcagttgaaaagtaggaagccttacatg
gtacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaaca
gtacaaaatgggccaggtggtgctgggatgcctgcatctctctcaataaatacagctaaa
ctggaagaaagcactgctgaggagactgataaactaaaggagaaatctcagggtgctgtg
aaagttattaataaagctgtcaatgctacaccaaaggtgacaacaagcaatggaaacagt
gcttctaatagcaaaattattaaagaaaaagaggataaagaaaaaagtgggaaggaaaaa
gagaaagaaaaaaaggaaaagactccagctgccactccagagaccaaggcacttgggaag
gatggaaaagataaaccaaaggaagaacgggcaaataaagatgataaagcaagagagatc
aaggagaagacaccaaaatctgacaaagagaaggaaaaagccaagaaagaagaaaaaact
tcaaaagaagaaaaaatgaagacagttgttaccaacattgattcaaaatcagctgcagaa
aaggagagagaaaaggagccgtccagagaaagagatgtagcgaaggatatgaaatccaag
gaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaagtcacctgttccc
cgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagttgatacccattct
tctccatcacattcctcaacagtaaaggacaacctcagcgaactcaaggactcttcagca
aagcactacattaaccacactactccaacactgtccaagagtaaggagagagaagtggac
aagaaagatttggacaagtcaagggaaagatcaagagagagagagaagaaagatgaaaag
gacaggaaagatcgaaaaagggatcattcaaacagtgaccgggaggtgccacaggattca
actaaacgacgcaaagaggaaaatgggacaactggttcttcaaaacatagtaaaagtgaa
agtccttctgattcccctcgctcaaatgaaaaggaaaaggagaagaacaaatcaaaatct
tcaggtaaagaaaaaggtgattcaatcaaagcagagaagatggagaagagctcctctggt
agcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagacagc
actggaggaaaagaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
