Apteryx mantelli mantelli (North Island brown kiwi): 106487690
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Entry
106487690 CDS
T04298
Symbol
SDC1
Name
(RefSeq) syndecan 1
KO
K06257
syndecan 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04512
ECM-receptor interaction
aam04514
Cell adhesion molecule (CAM) interaction
aam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106487690 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
106487690 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106487690 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aam04131
]
106487690 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aam04090
]
106487690 (SDC1)
00535 Proteoglycans [BR:
aam00535
]
106487690 (SDC1)
Membrane trafficking [BR:
aam04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
106487690 (SDC1)
CD molecules [BR:
aam04090
]
Proteins
106487690 (SDC1)
Proteoglycans [BR:
aam00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
106487690 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
106487690
NCBI-ProteinID:
XP_013801935
LinkDB
All DBs
Position
Un
AA seq
237 aa
AA seq
DB search
MDFNEQLFPGIESRTEKEVISPSATSSVVTEEPVVAVKDERPNLDSPPEKSTNDTVITTR
SLTTHFPFMVHVTPSEASSTVHGLEPNTPGSDVLDTKDVLEPHSPIHRERDFTAAPTTMA
PEDAVLVHEEVSEDGSGDPGDFILIKDEDLVPTQNSEVPADSGRNAKAAGASGIMDRKEV
LGGVIAGGVVGLVFAVFLVVFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatgaacagctgtttcctgggattgagagccgaactgaaaaggaagtaata
tctccatctgcaactagtagtgtagtgacagaggagccagttgtagctgtgaaggatgaa
agacccaacctggactcacctcctgagaaatcaacaaatgacactgttataacaacgaga
agcctcactactcactttcctttcatggttcatgtaactccttcagaagcctcaagcaca
gtccatggcctggaacctaatacccctggctctgatgtgctggacactaaagatgtgctt
gagccccactcccccatccatcgtgagagagactttactgctgcccccacaacgatggct
cctgaggatgcagttcttgtacatgaggaggtttctgaagatggctctggagatccagga
gatttcatcttgattaaagatgaggatttggtccccacccagaactctgaagtgccggct
gactctgggaggaatgccaaagcagcaggagcctcaggaataatggacagaaaagaagtt
cttggaggtgttattgctggaggagtagtaggcttggtgttcgcagtgtttctagttgta
tttatgctgtacagaatgaagaagaaagacgaaggaagctattcactggatgaaccaaaa
cagtctaatggaggataccaaaaaccacacaaacaagaagaattctatgcataa
DBGET
integrated database retrieval system
