Apteryx mantelli mantelli (North Island brown kiwi): 106487698
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Entry
106487698 CDS
T04298
Symbol
PRPF8
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106487698 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aam03041
]
106487698 (PRPF8)
Spliceosome [BR:
aam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106487698 (PRPF8)
Complex C
U5 SnRNP specific factors
106487698 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
106487698
NCBI-ProteinID:
XP_013801942
LinkDB
All DBs
Position
Un
AA seq
2133 aa
AA seq
DB search
MAANRRRADGPGAGRWYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKA
FFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNN
LPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPE
FVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVK
VRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYN
MLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHV
QYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVG
KGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFD
LELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRY
VKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYIT
AEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQRE
ELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYL
DQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFE
KMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQ
YYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFT
ADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLP
RSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTK
ERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRW
SKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRP
SLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVL
IAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY
LSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII
HTSVWAGQKRLGQVSXWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRA
LHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASL
TQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNY
ETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRA
QIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQP
NESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNT
DKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPK
EFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaatcgccgacgtgctgacggccccggtgccgggcgctggtacgtaaatggt
tctacgtaccagcgttggcagtttactctccctatgatgtccacgttgtaccggctggct
aatcagctgctcactgaccttgtggatgacaactatttctatttgtttgacctgaaagca
ttcttcacctccaaggcactgaacatggctattcctggaggtcccaagttcgagcctctt
gtcagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaacaaaatt
atcatcagacagccaatcaggacggagtacaaaattgctttcccatacctgtacaataac
ctgccacaccatgtccacctgacctggtaccatactccaaatgtcgttttcattaaaaca
gaagatcctgatctcccagctttttacttcgatccgctgatcaatcccatttcacacagg
cattctgtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgagttaccagag
tttgtggaacctttcctgaaggatactccgctctacacagacaatacagccaatggcatt
gccctgctatgggccccacggcccttcaacttgaggtctggcaggactcggagagctctt
gacatcccactggtcaagaactggtatcgtgagcattgcccagcaggccagccagtgaaa
gtgcgagtctcctatcagaagttactgaaatactatgttctgaatgcactcaagcacagg
ccccccaaggcccagaagaagaggtacctgttccgctctttcaaggctacgaaatttttc
cagtcaacaaagctagactgggtggaagtaggcctgcaagtgtgtcgccagggctacaat
atgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattacaacttc
aacctgaagccagtgaagaccctcaccaccaaggaaagaaaaaaatcccgatttggtaat
gctttccatctgtgccgagaggttctgcggctaactaagttggtagtggacagccatgtc
caatacaggcttggaaacgtggatgcatttcagttggcagatggcttgcagtacatcttt
gcccatgtaggtcagctgacaggaatgtacagatacaagtacaaactgatgaggcagatt
cgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcctgtgggc
aaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttcatgagg
ggcatcacaccgcttctggaacgctggctggggaatctgctggccaggcagtttgaaggc
cgtcactcaaagggtgtagcaaagaccgtcacaaagcagcgtgtggagtctcactttgac
ctggagctgagggcagccgttatgcatgacattctggatatgatgccagaagggatcaaa
cagaacaaagccagaaccatcctgcagcatttgagtgaggcttggcggtgctggaaggcc
aatatcccctggaaagtgcctgggctgccaactcctattgagaacatgatcttgaggtac
gtgaaggcaaaagctgactggtggacaaatacagctcactacaacagggaacggatccgt
cggggtgccacagtggacaagactgtctgcaagaagaatctgggccggctgaccagactc
tatttgaaagctgagcaggaacggcaacataattacttgaaggacgggccttacatcact
gcagaagaggctgttgctgtgtacacaaccacagtgcactggctggaaagcaggagattc
tcacccattcccttccccccactttcctacaagcatgacaccaaattgctcatattagcc
ctggaaaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcacagagagag
gagttgggcttgattgaacaggcttacgataatcctcatgaagctctgtctagaatcaaa
cgacaccttctaactcagagagccttcaaggaggtgggtattgagttcatggatctctac
agccacttagttcctgtttatgatgttgagcccttggagaaaatcacagatgcttatctg
gatcagtacttgtggtatgaggctgataagcgaagactcttccctccttggatcaaacct
gctgacactgagcctcctccactgttagtgtacaagtggtgccaaggcattaataatctg
caagacgtttgggaaacgagtgaaggtgaatgcaatgtgatgctggaatctcgatttgag
aagatgtatgagaagattgatctgacactgctcaacaggctcttgcgtctcattgttgat
cataacattgctgactacatgacagccaagaacaacgtggtgatcaactacaaggacatg
aatcacaccaactcctatgggattattcgtgggctgcagtttgcttctttcatcgtccag
tattatgggctggtgatggacctgttggtgctgggtctgcaccgtgccagtgaaatggca
gggcctccccagatgccaaatgacttcctgagcttccaggatattgctactgaggtggcc
catcccattcgcctcttctgcagatatatcgaccgtattcacatcttcttcaggtttaca
gcagatgaggcaagagacttgattcagcgctacctgacagagcatccagatcccaacaat
gagaacattgtaggctacaataacaagaaatgctggccccgggatgctcggatgcgcctc
atgaaacatgatgtgaaccttggtcgtgctgtgttctgggatatcaagaaccgcttgcct
cgatcagtcaccacagtgcagtgggagaacagcttcgtatctgtttacagcaaagataac
cccaatttgctgtttaacatgtgtgggtttgaatgccgcatcttgcccaaatgccgcacc
agctatgaggagttcactcacaaggatggggtctggaacctgcagaatgaggtcaccaag
gagcgcacagctcagtgcttcctgcgtgtggatgatgagtctatgcagagatttcacaac
agagtgaggcagatcctcatggcgtctggctccacaaccttcactaagattgtcaataaa
tggaatacagccctgattggcttgatgacatatttccgggaagctgttgtaaatactcag
gagttgcttgatttactggtgaagtgtgagaataaaatccagactcgaattaaaattggt
ctgaattccaaaatgcccagccgtttcccacctgtggtgttttacacccctaaagagcta
ggcgggctgggcatgctgtccatgggccacgttctcatcccacagtctgacctgaggtgg
tccaagcagacagacgttggcatcactcacttccgctcaggaatgagtcatgaggaggac
cagctgatcccaaatttgtatcgttacattcagccatgggagagtgaattcattgactct
cagagagtgtgggcagaatatgccctcaagcgacaagaggctatagcccagaacaggcgt
ctgacgctggaggacctggaggactcgtgggacaggggaattcctcgtattaacaccctt
ttccagaaagaccggcacaccctggcttatgataaaggatggagagtcaggactgacttc
aaacagtaccaggtcctgaaacagaacccgttctggtggacgcaccagcgccatgatggg
aagctctggaacctgaacaactaccgcacagatatgatccaggcacttggtggagtggag
gggatcctggagcacacgctcttcaagggcacttacttccccacatgggagggtctcttc
tgggaaaaggccagtggctttgaggaatccatgaagtggaagaagctgacgaatgcccaa
agatcgggtttgaaccaaattccaaacagaagattcacactgtggtggtctcctaccatt
aacagagccaatgtatacgttgggtttcaggtgcaactggatttgacaggcatcttcatg
catggcaagatccccacgctgaagatttccctcattcagattttccgagctcacttgtgg
caaaagatccatgagagcattgtgatggacttgtgtcaggtgtttgaccaagagctagat
gctctggagattgagacagtgcagaaggagaccatccatcccaggaagtcatacaagatg
aattcctcatgtgcagatatccttctctttgcttcctataaatggaatgtgtctcgtccc
tcactgctcgcagattccaaagatgtgatggacagcaccaccactcagaagtactggata
gatatacagctgcgctggggagattacgattctcatgacatcgagcgctatgcaagagcc
aagttcctggactacactacagacaacatgagtatctatccgtctcccactggtgtgctc
attgccattgatctggcctataacttgcacagtgcttatgggaactggttccctgggagc
aaacctctgatccagcaagccatggccaaaattatgaaagcgaaccctgcactgtatgtg
ttgagagaacgaatccgcaagggcttgcagctgtactcatctgagcccacagaaccctac
ctttcctcccagaactatggggagctcttttccaaccagatcatctggtttgtggatgac
accaatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccacaaaaccc
atcaacggggccattttcatcttcaatcccaggactggacagctcttcctgaagatcatc
catacatctgtgtgggcaggacaaaagcgtctagggcaggtgagttgntggaagactgct
gaagaagtggctgctttgattcgttcacttcctgtggaggagcagcctaagcagatcata
gtgactcggaagggcatgttggacccacttgaggtgcacttgctggatttccccaatatt
gtgatcaaaggctcagagttgcagctgcccttccaggcctgtctgaaagtggaaaagttt
ggtgatctcatcctgaaggctactgaaccacagatggttctcttcaatctctatgatgac
tggctgaaaaccatctcttcctatacggcattctcacgtctgattctgattctccgggca
ctacatgtgaataatgatcgagccaaagttattttgaaaccagacaagacgaccataaca
gagcctcaccatatctggccaacgctgacagatgaggaatggatcaaggtggaggtgcag
ctgaaggatctgatccttgctgactatggcaagaagaacaatgtgaatgttgcatccctg
acgcagtcagagatccgagatattatcctgggcatggagatctctgccccatcccagcag
agacagcagattgcagagattgagaagcaaaccaaggagcagtcacaactgacagccaca
cagacccgtactgttaacaaacacggggacgaaataatcacctctacaaccagcaactat
gaaacccagactttctcctccaagactgagtggcgagtcagagcaatttctgctgccaac
ctccacttgagaacaaaccacatctatgtttcatcagatgatataaaggaaacgggctat
acatacattcttcccaagaatgttttgaagaaattcatctgcatctcagatctgcgggcc
cagattgcaggttacctatatggagtgagccctcctgataatccccaagtgaaggagatc
cggtgcattgtgatggtacctcagtggggaacacaccagaccgtgcatctcccaggacag
ctgccgcagcatgagtatctcaaggaaatggaacctctgggatggattcacacccaacca
aatgagtcccctcagctctcgccacaggatgtcaccacccatgccaaggtcatggctgac
aacccgtcctgggatggggagaagactatcatcatcacctgcagttttacaccaggctcc
tgcacgctgacagcctacaaactgactccgagcggctacgagtggggcaggcagaacacg
gacaaagggaacaaccccaagggctacctgccctcccattatgagagggtgcagatgctc
ctgtcagatcgcttcctcggcttctttatggttccagcgcaagggtcctggaactacaac
ttcatgggtgtgcgccacgaccccaacatgaagtacgagctgcagctcgccaaccccaag
gagttctaccacgaggtccatcgcccctcgcacttcctcaacttcgccctgctgcaggag
ggggaggtctactccgccgacagggaggacctctacgcctag
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