Apteryx mantelli mantelli (North Island brown kiwi): 106487714
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Entry
106487714 CDS
T04298
Symbol
RPA1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03030
DNA replication
aam03420
Nucleotide excision repair
aam03430
Mismatch repair
aam03440
Homologous recombination
aam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106487714 (RPA1)
03420 Nucleotide excision repair
106487714 (RPA1)
03430 Mismatch repair
106487714 (RPA1)
03440 Homologous recombination
106487714 (RPA1)
03460 Fanconi anemia pathway
106487714 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aam03000
]
106487714 (RPA1)
03032 DNA replication proteins [BR:
aam03032
]
106487714 (RPA1)
03400 DNA repair and recombination proteins [BR:
aam03400
]
106487714 (RPA1)
Transcription factors [BR:
aam03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106487714 (RPA1)
DNA replication proteins [BR:
aam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106487714 (RPA1)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106487714 (RPA1)
MMR (mismatch excision repair)
106487714 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
106487714 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
Motif
Other DBs
NCBI-GeneID:
106487714
NCBI-ProteinID:
XP_013801960
LinkDB
All DBs
Position
Un
AA seq
601 aa
AA seq
DB search
MQGENISKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLAAH
CICQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGNIGNPVPYNEGQGQQRSSAPAANP
APSKPQQQNGNLSVAGSAAPKYHAPSKQFGKASGPSSVKTPGGSQSKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDARHLPSVQFEFVSISDLENTPKDSI
VDVIGICKSYEDVTKITVKSNNREVSKRNVHLMDTSGKLVTATLWGVEAEKFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAT
GGNTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPDFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQSAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATALDVKPVNYREYSKRLITSIRKNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaacatctccaagcctgtgctgcaagtcataaatacacgggctattgct
acaggaaatgggccaccgcgttaccgagtgttgatgagtgatggtgttaacacactctcc
tcattcatgttggcaacacagctgaactctcttgtggaagaggagcgcttagcagctcac
tgtatctgccaggttaacagattcattgtcaacagtctgaaagatggaaggagagtcgtt
attctgatggatttggatgttctgaaaactgctgatatggttggtgggaatattggcaat
ccggtgccatacaatgaagggcaagggcagcaacgttcttcagctccagcagcaaaccct
gcacccagcaaaccccagcagcaaaatggtaatttgtcagtagcaggttctgctgctccg
aagtaccatgctccctcaaagcaatttggtaaagcaagtggtcccagctcagtgaagaca
ccaggtggatcacagtccaaagtagtgccaattgccagcttgaacccttaccaatctaag
tggaccatttgtgcccgtgttacccaaaagggccagatccgcacgtggagcaactcccgt
ggtgaaggaaagctcttctctatagagctagttgatgaaagtggtgagattagagctact
gcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatacacagctgttaagaatgactat
gaaattacattcactaatgaaacttcagttgtgccctgtgatgatgcccggcatcttcca
tctgttcagtttgagttcgtatccatctctgacttggagaacacacccaaagactcaatt
gttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtgaaatct
aacaatagggaggtgtcgaagaggaatgtgcacctgatggatacatctgggaagctggtg
acagctacgttatggggagttgaggctgaaaaatttgatggttctagacaacctgtgata
gccatcaaaggagccagagtctccgatttcggtggtagaagcctgtctgtcctgtcctcg
agcacagttgtcatcaaccccgatagcccagaggcttttaagctccgaggatggtttgac
tctgaggggcagcttttggaatgtgcctcaatctctgatgtgaggggtggacctgcaact
gggggaaataccaactggaaaactctgtttgaagccaaatctgagaacttgggacaagga
gataaggcggattattttagctgtgtgggcacagtggtacatctgcgcaaagagaactgc
atgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaaaatgga
ctgtaccgttgtgaaaagtgtgatcgtgaattccctgacttcaagtaccgcatgatgctt
ctggtgactattgcagactgtttggagtatcagtgggtgacttgcttccaagagtcagca
gaattcattcttgggcaaagtgctgctttccttggagagctgaaggaaaagaacgagcag
gcatttgaggaagtgttccaaaatgcaaacttcaacacatatgagttcaggatccgagtc
aaactggagacttacaatgatgaatctcgcattaaggctacagcactggatgtcaaacct
gtgaactacagagaatacagcaagaggttgatcacaagcatcaggaaaaatgctcagctc
ggatga
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integrated database retrieval system
