Apteryx mantelli mantelli (North Island brown kiwi): 106488114
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Entry
106488114 CDS
T04298
Symbol
POLR1A
Name
(RefSeq) RNA polymerase I subunit A
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106488114 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106488114 (POLR1A)
Enzymes [BR:
aam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106488114 (POLR1A)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106488114 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
HMG_box
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
106488114
NCBI-ProteinID:
XP_013802421
UniProt:
A0A8B7IUD9
LinkDB
All DBs
Position
Un
AA seq
1644 aa
AA seq
DB search
MQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLLLSQLKVL
ERGLLHAVHDLEVILNRFLEQNADATGLEIEEELNHHVHEILQNHQLGDQCSNVKNVCEC
KNKLIAQFWKAHMASKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYQKSGEEGILEEPAII
DETQLGKRGYLTPMTAKEYILSLWKNEGFFLRYLFPGMDIHESAGFSPDMFFLDLLVVPP
SRYRPINRLGDRMFTNGQTVNLQAVMKDAQMIRKLLVFMAKEQCQPIKITEDEIQMETGE
SNEPLDRSVLAMIPGQTIADKLYNAWIRLQTHVNIVFDSDMDKLMTEKYPGIRQLLEKKE
GLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVI
NGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCRHIKNGD
VLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRA
EAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRGLTDKKG
RIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENHIPLNLTGKAKIGGKAWVKGPAKRCLE
TNLDSMCESQVIIRSGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLGRLFT
AYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSTHCGIEAVRAALNLPETASCDEVQGKW
QDAHLRKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGAKGST
VNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPSEFFF
HCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDI
PKTQFLQPKQFPFIAENYEVMQKTNHLDEALAKMESHQANQQFKAIKKWRARHQSSVQRE
GGFLMYSQKKMASVKAQIPGGESKNGRNPVTLQLLKMWYELDEKKRRKYQKKTNKCPDPS
LAVWRPDTYFASVSETFENGVEDYISKWESENRGCYVQPAFSSDRLKDLLYLKWQRSLCD
PGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREVLMVASANIKTPMMSV
PVFNTKKAHKKVKQLKKQLTRVCLAEVLQKVEMEESLRVKSKENRHRLYKIKFHFLPHEC
YREEKCVKPRDILCFMETRFFKILMEAIKRKNAKLASFTEVSARKATRKDLDGDQDQVLN
NREAPEDEEEKIVDAEADEGDGDATEAKRRKKQEEEVDYESEEENGDEHGENPEEEEAES
EKEERTQGAEGGDQSGADGDDSQHLSFMSQTKKERDQLVKSAELRINAVLSSHPSIQDYT
FDTENELWCEVSLTLPLMKVYFDLTSLLVSLARNTVIHEVKGITRCLLNENTSTEGEKEL
VLHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGVESALRVIIKEIKDVFAVYGIVV
DPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAYDELRSP
SACLVVGKVVKGGTGLFDLKQPLT
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttcagcaactgcccaggccattttggccacatagaactacctctgactgtc
tataaccctctattttttgataaattataccttctaattcgaggttcttgtttaaattgt
cacatgctgacgtgtactcgagctgtggttcacttactgctaagtcagctgaaggttctg
gagagagggttgcttcatgcagtccatgatcttgaagtcatcctgaataggtttctagag
caaaatgcagatgcaacaggtctagaaattgaagaagagttaaatcaccatgttcatgaa
atactacaaaatcatcaactaggagatcaatgttcaaatgtaaaaaatgtatgtgaatgt
aagaataagctgatagcacagttctggaaagcacatatggcttcaaagaaatgcccaaac
tgcaaatctaggagatcactagtgcgaaaagagcataacagcaagctgacagtaacctat
ccttccacagtatatcagaagtcaggagaagaaggcatcctagaagagccagcaattatt
gatgaaacccagttagggaagagaggatatctaacaccaatgactgccaaagagtacatc
ctgtctctgtggaagaatgaaggtttctttttgcgttatcttttccctgggatggatatt
catgagagtgcaggattcagtccagatatgttttttttagatcttcttgtggttccacct
tcaaggtatcgtcccataaatcgtctcggagatcggatgttcacgaatggacagactgtg
aacctgcaggctgtcatgaaagatgcccaaatgatacggaagctcttggttttcatggca
aaagaacaatgtcagccgataaaaatcacagaagatgaaatccaaatggagacaggggag
tctaacgaacctctggaccgttctgtcctggcaatgattccagggcagaccattgcagat
aagctgtacaatgcttggattcgtcttcagacccatgtcaacattgtgtttgatagtgac
atggacaagctaatgacagaaaaataccctggtattcgtcagctattagagaaaaaggaa
ggtctgttccgcaagcatatgatgggaaaacgtgtggattatgctgctcgatcagtcatt
tgccctgatatgtacattggtacgaatgagattggcattcccatggtatttgctaccaaa
ctgacttaccctcagccagtcactccctggaatgtcaaagagctgaggcaggctgtcata
aacggcccaaaggttcaccctggggcctccatggtcattaatgaagatggatctcgtacg
gtgttgagtgccagcagcctgacccaaagggaagctatagctaagcagcttcttacccct
tcttcaggtgccccccagtcaggactgaagattgtgtgtcgccatattaaaaatggagat
gtccttttactgaaccgccagcccacccttcatagaccctccatccaagctcaccgggcc
agaattctgcctggagagaaagtgctgcggcttcactatgccaactgcaaggcttacaac
gccgactttgacggtgatgagatgaacgctcactttccgcaaagtgagctgggcagagca
gaggcctacaccttagcctttactgatgaacagtatctggttccaaaggatggcaagcca
cttcctggcttgatccaagatcacatgatttctggtgtcagcatgacaatccggggctgc
tttttcacgcgggagcaatatatggagcttgtctaccgaggactaacagacaaaaaggga
agaattaaaatctttccacctgccattatgaagccacagcgattatggacgggaaagcag
gttgtttctaccttgttaataaacatcattccagaaaaccacatcccactgaatttgact
gggaaagctaaaattggtggaaaagcctgggtaaagggacctgcaaaaagatgtctagaa
actaatcttgattcaatgtgtgaatctcaggttattattagaagcggggagttactttgt
ggtgtcttggacaaagctcacttcggcagctctgcctatggcctggtccactgttgctat
gaaatctatgggggtgaaactagtgggaaagtgctaacatgtctaggacgcctctttact
gcttatctgcagctctacaggggatttacaatggggattgaagatatcttggttaaacct
gaagcagaccacaaaagacaaaaaattattgaaaagtcaactcattgtggtattgaagct
gttagagctgctcttaatttgccagaaacagcatcatgtgatgaggtccaagggaaatgg
caggatgcccatctccgcaaagaccagagagattttaacatggttgatctgaaattcaag
gaggaagtaaacaattacaacaatgaagttaacaaggtttgtatgcctcttggtctccat
aggagctttccagagaacaatttgcagttgatggtacagtcaggagccaaaggatctact
gtaaatacaatgcagatttcctgtttgctgggccagattgagctggaaggtcgaaggccc
ccgctgatggcatctggcaaatcactgccctgtttccagccttatgatttttcccctagc
tcaggaggatttgtgaccggcaggtttctcactgggatcaaaccttctgaattcttcttt
cactgcatggctggcagggaaggtcttgtagatacagctgtcaaaaccagtcgatctgga
taccttcaaaggtgtatcataaaacatttggaagggctggtggttcagtatgacctgact
gtacgtgacagcgatggcagtgtggtgcagtttttgtatggagaagatgggcttgatatc
cctaaaactcagtttttacaacccaagcagtttcctttcattgcagaaaactatgaggtg
atgcaaaagacaaaccatctggatgaagctttagcaaagatggagtctcaccaagctaac
cagcagttcaaagccatcaaaaagtggcgagccaggcaccaaagctctgtgcaaagagaa
ggaggttttctgatgtattcccagaagaaaatggcaagtgtaaaagcacagattcctgga
ggagagagcaaaaatggaagaaatcctgttactttacagttattgaagatgtggtatgaa
ctagatgagaagaaacgaagaaaatatcagaaaaagacaaataagtgtcctgacccaagc
cttgcagtctggcgtccagatacttattttgcatctgtttcggaaacatttgaaaatgga
gtcgaggattacatcagcaaatgggaatctgagaacagaggatgttacgtgcaaccagca
ttttcttccgatagattaaaggatttgttgtatttaaagtggcaacgatccctgtgtgac
ccaggagaagctgtgggtctccttgcagcccagagtattggggaaccttccacacagatg
actttgaacactttccactttgctggcagaggtgaaatgaatgtcacattgggtattcca
aggttgcgggaggtattgatggtagccagtgcaaatattaaaacaccaatgatgagtgtt
cctgtgttcaataccaagaaagctcacaagaaggtgaaacagcttaagaagcagctgaca
agagtgtgcttagctgaggtcctgcagaaagttgagatggaggaatctctgcgtgtgaag
agcaaggagaacagacatcgcctctacaaaatcaaattccatttcttgccccacgaatgt
taccgagaggagaagtgtgtgaagcccagggacatcttatgcttcatggaaacaagattt
tttaaaatcttgatggaagcaattaagaggaagaatgcaaagctggcatcttttactgaa
gtcagtgcccggaaagcaactcggaaagatttagatggtgaccaagaccaggtattgaat
aatcgtgaagctccagaagatgaagaagagaagattgttgatgcagaagctgatgaaggg
gatggtgatgctacagaagcaaagaggaggaagaaacaggaagaagaggttgattatgag
agtgaagaagagaatggggatgaacatggtgagaatccagaagaggaagaggctgaatcg
gagaaagaagaaaggactcaaggcgctgaaggaggagatcagagtggagcagatggtgat
gattctcaacacctttcctttatgtctcagaccaaaaaagagagggatcaattagttaaa
tcagcagagttacgaataaatgctgttctgagcagccacccatcaatacaggattacaca
tttgatacagaaaatgaactctggtgtgaggtttcactgacgcttcctctgatgaaggtg
tactttgacctcacctccttgctggtgtctctggcacgaaacacagtcattcatgaggta
aaggggatcacacggtgcttgttgaatgaaaacaccagtacggaaggagagaaggaactc
gttttacataccgaagggataaaccttgccgagctgttcagatactctgatattttggac
ctgaacagactttattccaatgatattcatgccatggctaagaattatggtgttgagtct
gccctgagggtgattataaaggaaataaaagatgtgtttgctgtgtatggtattgtggta
gaccctcggcacctttcgctggtggcagattacatgtgctttgaaggagtttataaacca
ctgaatcgttttggaattcagtccaactcttcccccctgcaacagatgacatttgaaacc
agctacaaattcttgaaggaagcaacaatgatgggtgcctacgatgaactgagatctccg
tctgcgtgcctagtggttggaaaagtcgttaaaggagggactggtttgtttgacctcaag
caacctcttacgtaa
DBGET
integrated database retrieval system
