Apteryx mantelli mantelli (North Island brown kiwi): 106489393
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Entry
106489393 CDS
T04298
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106489393 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106489393 (CNOT1)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106489393 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106489393 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106489393
NCBI-ProteinID:
XP_013804038
LinkDB
All DBs
Position
Un
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLQIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaatcggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagacttcatgcaa
gaagttggctatggcttttgtacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttggggatgatggctcgaact
cattcggggttgacggacggtattccattacaatctatatcggctcctggcagtgggatt
tggagtgatgggaaagataaaagcgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagtttggacttcaaagtagtaacctatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcttgcagattgtagtgtttggg
atccagagagggctaggcatggaagtctttccagttaatgccatatacagaccttggaaa
catgcagaaggccagctctccttcattcagcattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgcaacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcactgc
ccagatatgttggtattggccttattgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgccagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaactgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgcatgactttctta
aagagaagatgtccatctatcctcggtggcctggctccagaaaaagatcagcccaaaagt
gctcagcttcctccggaaaccttggcaactatgttggcttgtctccaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagccaccacctggagtcatgccaaaaggccgtccacctagtgct
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcgggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcgtttccccctctttccacccag
aaccagacaacaggtttcagtggcattggaggactctcttcacagcttccagtaggtggc
cttactacgggtagcctgaccggtataggaactggggcccttggcctccctgcagtgaac
aatgacccgttcgtgcaaaggaaactgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctactttcagcgtatttataaccatccacca
catccaaccatgtctgtagatgaggtgttagagatgctacagagattcaaggactccaac
atcaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttttttccccaatacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacttacaggagtacatagaatatggacagcagtcccgagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcactcgtccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactactaacattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgttcaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacaaaaggttgaggagctgaaggaa
acagtgaaagaagagttcatgccctgggtatcgcagtatctcgtcatgaaaagagtcagt
attgagccaaactttcacagcttatattccaacttccttgacactctcaaaaatccagag
tttaataaaatggttctgaatgaaacctacagaaatataaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcattggctggga
atgattacattggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgctg
cttctggaagcgtacgttaagggacagcaggaattgctttacgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtgttcaggcctccaaacccctggacgatg
gccattatgaatgttttagctgagctgcatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcgctagatatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgattgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccggaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagcctcagtacagttaccac
gacatcaatgtctactccttaggaggcctggctccgcatattaccctaaatccaacgatt
ccactgtttcaggcccacccgcagttgaagcagtgtgtgcggcaggctatcgagcgagca
gtgcaagagctggtccatccagtggtagatcggtccattaagattgccatgactacttgt
gaacagatagtcagaaaggactttgccctggattcagaagagtcccgaatgcgtgtagca
gcacatcatatgatgcggaacctgactgctgggatggccatgattacctgcagggaacct
ttgctgatgagcatagctaccaacttgaagaatagttttgctactgcactgagggcagcc
tccccacaacagagggacatgatggagcaagcagctgcccagctagcgcaggataactgt
gagctcgcgtgctgctttattcagaagacagctgtggaaaaagcaggccctgaaatggat
aagaggctagcgactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgttgtgttaacttaccaagcagaacggatgccagaacagatcaggttaaag
gttggaggtgtggatccaaaacagctggctgtttacgaagagtttgctcgcaacgtccct
ggcttcttgcctaccaatgacttaacccagcctacaggattcttggctcagcctatgaag
caagcctgggctacagatgatgtagcacaaatctatgataaatgtatgacagaactggag
cagcacctgcagtccattccacataccctggccatgaatcctcaagctcaagctttgcgc
agcctcttggaggctgtggtagtggctcgtaactcacgtgatgctattgctgcacttggg
ctgctgcagaaggctgttgagggcttactggatgccacaagtggggccgatgctgacctt
ctgcttcgctatcgtgagtgtcatctgcttgtgctgaaggctctgcaggatggccgtgcg
tatggatctccgtggtgtaacaaacaaattactaggtgcctgattgaatgcagggatgag
tacaagtacaatgtagaagcagtggagctgctaatccgcaatcaccttgttaacatgcag
cagtatgatcttcacttggctcagtcaatggagaatggcttgaactacatggcagtggca
tttgccatgcaattggtaaagatcctcttggtggatgagagaagcgttgcccacgtaaca
gaggcagatctgtttcacaccattgagacgctcatgagaattaacgctcactccagagga
aatgccccagaaggattaccccagttgatggaagtggtccgatcaaactatgaagccatg
attgaccgtgctcatggaggtcccaatttcatgatgcattctggaatatcccaagcctct
gagtatgatgacccaccaggtctgagggagaaggcagaatatctactgagggaatgggtg
aacctctaccattcagctgcagcaggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaacagatgac
ctgatcactcgattttttcgtctttgcactgaaatgtgtgttgaaatcagttatcgtgct
caggctgagcaacagcataaccctgctgccaaccccactatgatccgagccaagtgctac
cacaatctggatgcctttgtgcgacttattgcactactagtgaagcactctggggaggca
accaacacagttacaaagatcaacctcctgaacaaggttcttggtattgttgtgggagtt
cttctgcaggaccacgatgtccggcagagtgaatttcagcagcttccttaccatcgcatt
ttcatcatgttgctgttagaattaaatgctcctgagcatgtgctggagaccatcaacttc
cagacactcacagccttctgtaacacatttcacatcctgaggcctacaaaagctccaggt
tttgtttatgcctggctggaactgatctcccatcggatatttattgcaagaatgctggca
catacaccacagcagaagggttggcctatgtatgcccagttattgatcgatcttttcaag
tacttggctccttttcttagaaatgtggaactcaccaaacctatgcaaattctttacaag
ggcaccctgcgagtgttgctggtcttgttgcatgatttcccagaatttctttgtgactac
cactatgggttctgtgatgtgatcccccctaactgtattcagctaaggaaccttatcctg
agtgccttcccacggaacatgaggcttccagaccctttcacccccaacctgaaggtggac
atgctgagtgagattaatattgctccacggatacttaccaatttcactggagtgatgcca
cctcagttcaagaaagacttggattcctatctcaaaacccgttctcctgtcactttcttg
tctgacttgcgcagcaacctacaggtatcaaatgaacctggcaaccgctacaacatccag
ctgattaatgcactggtgctctacgtaggtactcaagctattgcgcacattcacaacaaa
ggcagcacgccctccatgagcaccatcacccactcggctcacatggacatcttccagaat
ttggctgtagatctggacactgaaggtcggtaccttttcttgaatgcaattgccaatcag
ctgcgatatcccaacagtcacacccactacttcagttgcaccatgctttacctgtttgca
gaggccaacactgaagctatccaggagcagatcactagggttctcttggaacgactgatt
gtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaatcca
gcgtttaagttctggaaccatgagtttgttcactgtgctccggagattgagaagttgttc
cagtcagtggcacagtgctgtatggggcagaagcaggcccagcaagtaatggaagggact
ggtgccagttag
DBGET
integrated database retrieval system
