Apteryx mantelli mantelli (North Island brown kiwi): 106489478
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Entry
106489478 CDS
T04298
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aam03016
]
106489478 (TRUB1)
Enzymes [BR:
aam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106489478 (TRUB1)
Transfer RNA biogenesis [BR:
aam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106489478 (TRUB1)
Prokaryotic type
106489478 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
106489478
NCBI-ProteinID:
XP_013804120
UniProt:
A0A8B7IZ30
LinkDB
All DBs
Position
Un
AA seq
283 aa
AA seq
DB search
MIYVCDIRQGKLCPCTRSQLKPYTLFKGFIQDRGGVSACSQQKEAGVQTNRNKRKKQILK
IGHGGTLDSAATGVLVVGIGKGTKMLRAILAGSKKYTAIGRLGKATDTLDATGKVTEEKP
YDKITKGDLENVLQKFTGDIMQVPPLYSALKKDGQRLSSLIKRGEAVEAKPARPVRVYSL
SLQRFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASVQELTRTKQGPFTLEEHALYED
KWTIDEIARSLERCTSLLPGEPSHKKFKTEDSGETAVSCEDKR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgtctgtgatattcgccaaggcaaactttgtccttgtacaagaagccagctc
aagccctacacgttgttcaagggctttatccaggacagaggtggggtatctgcttgttct
cagcagaaagaagctggtgtgcaaacaaataggaacaaaagaaagaaacagattttgaaa
attggacatggtggaactttggacagtgcagctacaggagttctggtggttggtattgga
aaaggaacaaaaatgctgagagctatattggcaggttccaagaagtacactgccattgga
cgactgggcaaagctactgatacattagatgctacaggaaaagtaactgaagaaaaacct
tatgataagataacaaaaggagatcttgaaaatgtgctgcaaaagttcacaggggacata
atgcaggttcctccactctattctgctttgaagaaggatggacaaaggctatcaagtctg
ataaagagaggagaagcagttgaagcaaagcctgctcggccagtaagagtgtacagcctc
tctctccaacgcttccagccaccactgttcacactggatgttgaatgtggtggtggcttt
tatgtcaggagcctggtcagtgacattggcaaagaactctctacctgtgccagtgtgcaa
gagctgacccgaaccaaacaggggccatttacactagaggagcatgcactttatgaagac
aaatggacaattgatgaaattgcacgatccttagagcgttgcacgtctcttctcccagga
gagccatctcataaaaaatttaagacagaggattctggagaaactgctgtgagctgtgaa
gataagcgataa
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