Apteryx mantelli mantelli (North Island brown kiwi): 106490370
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Entry
106490370 CDS
T04298
Symbol
MSH2
Name
(RefSeq) mutS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106490370 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aam03400
]
106490370 (MSH2)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106490370 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
106490370
NCBI-ProteinID:
XP_013805209
UniProt:
A0A8B7J3H0
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All DBs
Position
Un
AA seq
886 aa
AA seq
DB search
MPLTGAVFGQQVQRCCALGGKASGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKA
GSKSTKENDWYLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTADGQRVVGVGYVD
TTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDR
KKAEFTTKDIVQDLNRLLKSKKEEQMNSAALPEMEKQVAISSLSAIIKFLELLSDESNFG
QFELTTFDLSQYMVLDNAAVQALNLFQSSMENANTAQSLAGLLNKCRTPQGQRLVNQWIK
QPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRM
YQAINQLPNVVQALEKHEGDHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHE
FLVKASFDPNLTELREKMNELEENMQSFLKSAAKELGLEAGKSIKLESNSQFGHHFRITC
KEEKVLRNNSKYRIIDTQKNGVKFTNSKLSSVNEEYIKNREEYEEAQDAIVKEIINIASG
YAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGRGRIVLKGSRHPCIEVQDD
VAFIPNDIMFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDC
ILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAIS
EYIATKICPFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFG
IHVAELAAFPKHVIESAREKALELEEFQNIGKSKESEGEPPAKKPYREREEGEKIIQDFL
CQVKALPLTDMSEEDIKAKLKQLRTEVLAKNNGFVNEIISRTKVTS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgacaggagccgtctttgggcagcaggtgcagcgttgctgtgctctcgggggc
aaggcctccggaaatcagaaactggagagtgttgtgcttagtaaaatgaactttgaatct
tttgtgagagatctgcttctggttcgtcattacagagtcgaagtttacaagaacaaagct
gggagtaaatctaccaaagaaaatgactggtatttggcatacaagggttctccaggaaat
cttgcccagtttgaggaagttctctttgccaacaatgatatgtcaacggccattggagtt
gtgggggtgaagctgtctactgctgatggacaaagagtagttggagtggggtatgtcgat
actacactgagaaaattgagcgtctgtgagtttccagataacgatcagttctcaaacctt
gaagctctgctggttcagctgggacctaaggagtgtgtgctaccaggaggagagactgct
ggagagatgggaaaactacgacaagtcattcagagaggaggaattctgattacagacaga
aagaaagcagagttcacaacaaaagatattgttcaggatctcaatcgcttgttaaaatca
aaaaaagaagaacagatgaatagtgcagcattaccagagatggaaaagcaggttgccatt
tcatctttgtcagctattatcaagtttttagagttgctgtcagatgagtctaactttgga
caatttgaactgactacttttgatcttagtcaatatatggttcttgataatgcagctgtc
caagccctcaaccttttccagagttctatggaaaatgctaatactgcacagtcactagct
ggcttactaaataaatgcagaacccctcaaggacaaagactagttaatcagtggatcaaa
cagccacttatggacaagaatagaattgaagaaagattgaatttggttgaagcctttgtg
gtagatccagaactacgtcagtgccttcaagaagatcttttacgtcgcttcccagatctc
aaccggctagcaaagaaatttcagagacaagcagcaaccttacaggactgttaccgaatg
tatcaggctattaatcaactgcctaatgttgtacaagcactagaaaaacatgaaggagat
caccagatgttgttgttggcagtgtttataacaccgcttaatgatatccactctgacttc
tcaaagtttctggagatgatagaaacaacattagacatggataaggtggagaatcatgaa
tttcttgtcaaggcttcttttgatcctaacttgacagaattaagagagaagatgaatgaa
ctggaagaaaacatgcagtcctttttaaagagcgcagccaaagaactaggtttggaagct
ggcaaaagtatcaaactagagtcaaactcacaatttggacatcattttcgaattacttgc
aaggaagaaaaagttctccggaacaattcaaaatacagaataattgatacacagaagaac
ggtgtgaagtttactaacagcaaactgagctccgtcaatgaagaatatataaagaacaga
gaagagtatgaagaggctcaggatgcaattgttaaggaaatcattaacattgcttcaggt
tatgcagagccgatacagacaatgaatgatgtgatagctcaattagatgcaattgtcagt
tttgctcatgtgtcaaacggagcaccagtgccgtatgtccgtcctgtcattctggaaaag
ggacgaggaagaattgtgctgaaaggttccaggcatccttgcatcgaagtgcaagatgat
gtagccttcatccccaatgacattatgtttgagaagggcaagcagatgttccacattatt
actggcccgaacatgggggggaagtcaacatacatccgacagaccggggtgatagttctt
atggcccaaattgggtgttttgtaccatgcgactctgcagaaataaccattgtggattgt
atcctggctcgggtaggagctggcgacagtcagctgaaaggcgtgtctactttcatggct
gaaatgttagaaactgcttcaatccttaggactgcatctgaaaactccctgataatcatt
gatgagctgggaagaggaacatctacctatgatggctttggcttagcatgggctatttca
gaatacattgctaccaaaatttgtcctttctgtatgtttgctacacatttccatgaactg
acagcacttgctgaccaagtgcccacagttaataatctacatgttactgctctgaccagt
gatgacacactgacgatgctttaccgtgtcaaggaaggtgtttgtgaccagagttttgga
atacatgtagcagagttggcagcttttccaaaacacgtaatagagagtgcaagagagaag
gcattggagctggaggagtttcaaaacattggcaaatccaaggaatctgaaggagaacca
ccagccaagaaaccttacagagaaagagaggaaggtgaaaaaataattcaggattttctt
tgtcaagtgaaagcattgcccctgacagatatgtcagaagaagacatcaaagccaagctg
aagcagctgaggaccgaagtgttggcaaagaacaacggttttgtgaatgaaataatttcc
cgaacaaaagttacatcgtga
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