Apteryx mantelli mantelli (North Island brown kiwi): 106490408
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Entry
106490408 CDS
T04298
Symbol
MSH6
Name
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106490408 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aam03400
]
106490408 (MSH6)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106490408 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PWWP
Motif
Other DBs
NCBI-GeneID:
106490408
NCBI-ProteinID:
XP_013805252
LinkDB
All DBs
Position
Un
AA seq
1267 aa
AA seq
DB search
MEGYPWWPCLIYNHPTEGTIVRGKGKSARIHVQFFDDSPTRGWVSIKYLKPYKGSSDGEA
LKGGTFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEEEMEQMSES
ASGDSDDCNSEEGVKTNKRVANRGRSAVKAKRRRVLDSDSDHEGSDVEFKPDVKEAASSE
EASSGVDENESTGTETDAESIAESPIKVPSKRKRRDTSKPAKRNSLGNERSETPKRAAVV
SLEAKSKLTSFAAPENFESQANACSGGIGGFAVWEHEKLDWLQEGKRKDARRRRQDDPDY
DPCTLYVPEDYLNKCTPGIRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTAVNELGLIF
MKGTWAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSMAHPTKFDKVVRR
EICRIITKGTQTYSVLDCDPSENHNKYLLCIKEKEDSSGHRVYGVCFVDTSVGKFYVGQF
SDDRHCSRFRTLVAHYTPVQVLFEKGNLSVDTQKILKGSLVSCIQEGLSSGSQFWNASKT
LKVLLEEEYFKEKQNSDNGCSLPSVIKFMTSESDSLGLTPGENSELALSALGGCIFYLKR
CLIDQELLSLGNFEEYIPVDIDIAKTTSSSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGT
TEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLK
KLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVD
VMEEIASDFKSKVLKQLVTRKARNPEGRFPDLNAELKRWDTAFDHNQARKTGVITPKTGF
DPDYDKALQDIKAVEKDLHEYLDKQRKLLGFKSMLYWGAGKNRYQIEIPESAISRNLPEE
YELKSTRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVEC
IAVLDVLMSLANYSQDGDGPLCRPVILLPVDSTPPFLELKSSRHPCITKTFFGDDFIPND
IMIGCKDEDSSIEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRV
FTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVK
ELAEKIKCRTLFSTHYHSLVEDYSHSAAVRLGHMACMVENESEDPSQETITFLYKFIEGV
CPKSYGFNAARLANIPEEVVQKGHRKAKEFEKTTISLRIFRYLCLVVDDATSDTNAIQKL
TTMISHL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttacccttggtggccatgtctcatatacaaccacccaactgaaggaacaata
gtcagaggaaaagggaaatctgctcgtattcatgtacagttttttgatgacagtcccaca
aggggctgggtcagtattaaatacctgaagccatacaaaggttcatcagatggggaggca
ctgaagggaggtacgttttacagtacaaagcctgaaattaaaagagcaatggtgctagcg
gatgatgcaatgagtaaagataaaactaagcgacttgagcttgcagtatgcagtgaacct
tcagacacggaggaggaggaggaggaggaggaggaggaaatggagcagatgagtgaaagt
gcatcaggcgacagtgatgactgcaatagtgaggagggtgtgaagaccaataagcgagta
gcgaatagagggagaagtgctgtaaaagccaaaagaagaagagtgttggattctgacagt
gatcatgaaggttctgatgtagagttcaagcctgatgtgaaagaagcagcaagcagtgag
gaagctagtagtggggtagatgaaaatgaatctaccggcacagagacggacgcagagagc
attgcagaaagccccattaaagtcccttctaaacgaaagagaagagacacaagcaagcct
gctaaaaggaatagcttaggaaatgaacgttctgaaacacctaaaagagcagcagtggtt
tctttagaagctaagtctaagctaacatcttttgcagcacctgaaaattttgaatctcaa
gcaaatgcttgcagtggaggaattggtggctttgcagtgtgggaacatgaaaagcttgac
tggctgcaggaagggaaaaggaaagatgcacgcaggagacgacaggatgatcctgattat
gacccatgtactctttatgtacctgaggactatcttaacaagtgtacaccaggaatacgg
aggtggtggcagctgaaaagtcaaaactttgatgctgtgattttttacaaagttggaaaa
ttctatgagttgtatcatatggatgcagtcactgctgtaaatgagttgggcctgatattc
atgaaaggcacttgggcccattcaggttttccagaaactgcatttggcagattttcggat
gttctagtacagaagggctacaaggtagcccgtgttgagcaaacagaaacccctgaaatg
atggaagcacgctgtaaatcaatggctcacccaacaaaatttgacaaggttgtacgccga
gaaatatgtagaatcattactaaagggactcagacttacagtgttctggattgtgatcca
tctgagaaccataacaaataccttctgtgcattaaagaaaaagaagactcctctggacat
cgtgtatatggggtttgttttgttgacacatcagtagggaagttttatgtaggccagttc
tcagatgaccggcactgttcgaggtttcgaactttagtggcgcattacactcctgtgcag
gtactgtttgagaaaggcaacctctctgtggacacgcagaagatcctgaaaggctcgctt
gtttcttgcattcaggaagggttgagctctggttcccagttctggaatgcatctaaaaca
ctaaaagttcttcttgaagaagaatatttcaaggagaaacagaactctgataacggatgt
tctctgccctctgtaatcaaatttatgacttcagagagtgattcactgggattaactcct
ggtgaaaatagtgaattagctctgtcagctcttgggggatgtatcttctatctcaaaaga
tgtttgattgatcaggagctgttatcattgggaaactttgaggagtatatccctgtggat
attgatattgctaaaactacaagttcaagtagtttctttgccaaaactgaccaacggatg
gtgctggatggagtcaccctaatgaacttggaagtcctgcagaatggaactaatggaacc
acagaaggtactttgttggaaaggattgactcttgttgtacgccatttggaaagcggctc
ctgaaacaatggctctgtgctcctctctgtaatcctaaatccatcaatgatcgtttagat
gctgttgaagaccttctggcagtgcctgataaaatgtctgaagttagtgagcacctgaag
aaacttcctgaccttgaaagactactcagcaaaattcacagcattggatcaccacttaaa
agtcagaaccatcctgacagcagggccatcttttatgaagaaatcaagtatagcaaaaaa
aaaattgctgattttttatctgcactggagggttttaaagtaatgaatgaaattgtagat
gtcatggaagaaattgccagtgacttcaaatctaaagtacttaagcagctagtcacccgc
aaagccagaaatccagagggtcgctttccggacttaaatgcagaacttaaaaggtgggat
actgcttttgatcataaccaggctcgaaagacaggagtgattactccaaagacaggcttt
gaccccgattatgataaagcactacaggatattaaagctgtagagaaagatcttcatgag
tacctagataaacaacgcaaactgcttggattcaaatccatgctgtactggggggcaggc
aaaaatcgataccaaatagaaataccagaaagtgcaatatcacgtaatttgcctgaggaa
tatgaattgaagtcaaccaggaagggatataaacgttactggaccaaggagattgagaag
atgctggctgcgatggttaacgctgaagagcggagagatgcagcactaaaagactgtatg
aggcgtttgttttacaacttcgataaaaatagcaaagactggcagacagcagttgaatgc
attgctgtgttagatgtcttgatgtcccttgctaactacagtcaagatggtgatggacct
ctgtgccgacctgtaattctactgcctgtggatagtactcctccattcctggaacttaaa
agttcacgccatccatgtattacaaaaactttttttggagatgattttattcctaacgac
atcatgataggctgcaaagatgaagatagcagtattgaagcttcctgtgtgttagtaact
ggcccaaacatgggtggcaaatctacgctcatgagacaggctggtctcttggttataatg
gctcaattgggatgttatgtacctgctgaagtctgcaggcttacacctatcgacagggta
tttacaagactgggtgcctcagacagaattatgtcaggtgaaagtaccttctttgttgag
ttgagcgagacttccagcatactccagcatgcgacagagcattcccttgttcttgtggat
gaactaggtagaggcacagctacttttgatggaacagctatagcaagtgcagttgttaaa
gaacttgcagagaaaatcaagtgtcgaactttgttttctacacactaccattcactagta
gaggattattcacacagtgctgctgtgcggcttggtcacatggcatgtatggttgaaaat
gagagtgaagatccaagccaggaaactattacattcctgtacaaattcattgaaggagta
tgtccaaaaagctatggcttcaatgcagcaagacttgctaatattccagaggaggttgtt
cagaaggggcacagaaaagcaaaagagtttgaaaaaacaacaatttcactgagaatattt
aggtatctctgcttggtggtggatgatgcaacaagtgatacaaatgctattcagaagctt
accactatgatcagtcatctttaa
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