Apteryx mantelli mantelli (North Island brown kiwi): 106491079
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Entry
106491079 CDS
T04298
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA processing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106491079 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aam03041
]
106491079 (PRPF38A)
Spliceosome [BR:
aam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106491079 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
106491079 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
106491079
NCBI-ProteinID:
XP_013806070
UniProt:
A0A8B7J4N3
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacccgcatctacgagtccaagtactggaaggaggagtgcttc
ggcctcacggccgagctggtggtggacaaggccatggagctcaagtacgtggggggcgtc
tacggcggcaacatcaagcccacgcccttcttgtgcttgacgctgaagatgctgcagatc
cagcccgagaaggacatcatcgtggagttcataaaaaacgaagacttcaaatacgtccga
atgcttggtgcattgtatatgagattgacaggcactgccattgattgctacaagtatctt
gaacccctgtacaatgattatcgaaaaataaaaagtcagaacagaaatggcgaatttgaa
ctgatgcatgtggatgaatttattgatgaactactccatgaggaacgtgtgtgtgatatc
attctgcctcgattacagaaacgatatgttctggaagaagctgagcaactcgagcctcgt
gttagtgctttggaagaagatatggatgacgtggagtctagtgaggaggaggaggaagaa
gatgaaaaattggagcgagcaccctctccggatcaccgcagaagaggctacagagacctc
gataaaccccgcagatctcctgttgtgcgatacaggcggagccgaagcaggtctccaaga
agacgaagccgctctccaaagagaagaagcccatcaccacgccgggagaggcatcgcagc
aaaagcccaagacgacaccggagcagatccagagagaggcgccacagatcaagatctaaa
tctccagggcatcaccgtagtcacaggcacagaagtcactctaagtcacctgaaagatct
aagaaaagccacaagaaaagtcgacgagggaatgaatag
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