Apteryx mantelli mantelli (North Island brown kiwi): 106492667
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Entry
106492667 CDS
T04298
Symbol
CHD5
Name
(RefSeq) chromodomain helicase DNA binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aam03036
]
106492667 (CHD5)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106492667 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106492667
NCBI-ProteinID:
XP_013807995
LinkDB
All DBs
Position
Un
AA seq
2006 aa
AA seq
DB search
MRVAPSAEPRQTSSGKRECCVLHACEILPSKLSLLSSEEDDGVLEGLDEFYPEEQVAVQK
KKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKE
KKPKRKKKDEEEDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFL
RPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPPLAA
SPPQSALPTVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPNKRKKS
SSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEV
CQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEDEEEEGAE
EEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKV
QRILHWTWKEPPAPLPSVLPLPDAELAVPPPKALEGIPEREFFVKWAGLSYWHCSWVKEL
QLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKP
EWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQLYWNHRELML
GEDTRPPKKLNKKGKKLKEEKLEKPPETPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLN
WLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFE
MWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELI
TIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHL
LNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVR
VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVL
PNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYER
IDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ
AFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQEL
DDILKFGTEELFKDDVEGMMSQGQRIGMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPG
DNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEV
EREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDE
LSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGF
NARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAE
TFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGSESKKSSEIVS
SDPNTPVPASPAHMHTGPVALSDKIETQLGFQEEKDQVEQKSKKVSDSQVPASAEKVERE
EHQESSENKEKVTEEKQEESGQAEPSPEPLVKDEAIQEKEKPLEKSELNSSAGKGEDKEV
KPEDAKVEEKEQNETQQNGEKEEEEEGKKDERNANFRFMFNIADGGFTELHTLWQNEERA
AISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMK
NKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKE
SLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTT
RGGDPAVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTASSSGPRSSHPDQ
KAAESLKDGAAVERQGKHGDVICIED
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtggccccgagcgcggagccacggcagacctccagcggtaaacgtgaatgctgt
gtcctgcatgcatgtgaaatccttccaagtaagttgtcccttttgtcctcagaagaagat
gatggggtcctggaaggactggatgagttttacccagaagaacaagttgccgtgcagaaa
aaaaagaaatccaagaagctgaaagacagtaaggctgccaaaatcaagaggaggaagaaa
gaggggagcaatgatgagatatcagacaatgaagaggagatagaggagaagtcggagagt
gaaggaagtgactattcccccaacaaaaagaagaaaaaaaaactgaaagaaaagaaagag
aaaaaaccaaaacggaaaaagaaggatgaagaggaggatgataatgaggatggaggttta
aaggagcccaagagctcagcccagctgatggaagaatggggcctggatgatgtagattac
attttctcagaagaagactatcatactctgactaattacaaggctttcagtcagtttctc
aggcctctaatagccaagaagaatcccaagatccctatgtccaagatgatgactgtgctt
ggtgccaaatggcgagagttcagtgccaacaacccgttcaagggcagctcggcagcggcg
gcagcggcggcggttgctgcagctgtggagactgtcgctattgcgcccccgctcgctgcc
agccctccgcagtctgccttgcccactgtcatcaggaaagctaagaccaaggagggcaaa
ggtccaggtgtgcggaagaaaatcaagggctccaaagacgggaagaaaaagggaaagggg
aaaaagatggcaggcttgaagttccggtttggaggaatccccaacaagaggaaaaagagc
tcttctagtgaagaggaagaacgggaagagtccgactttgacagtgccagcatcaacagc
tcctcagtgcgctccgaatgctcggcgggcctggggaagagaggaaagaggaggagaaag
aaaaagaggatcgaagaaggggacggctatgagacggaccaccaggactactgcgaggtg
tgccagcagggaggggagatcatcctgtgcgacacctgtcctcgcgcctaccaccttgtc
tgcctggaccccgagctggagaaggcccccgagggcaagtggagctgcccacactgtgag
aaggaggggatccagtgggagccgaaggaggaggaggatgaggaagaggaaggtgctgaa
gaggaggaagatgaccacatggaattctgccgtgtctgtaaggatggaggggagctgctg
tgctgcgacacgtgcccgtcctcctaccacctgcactgcctgaacccaccgctgccagaa
ataccaaacggtgaatggctctgcccgcgctgtacatgccctcccctaaagggcaaagtc
caacgcatcctgcactggacctggaaagagccgcctgccccgctcccgtcggtgctgccc
ctgccggacgccgagctggctgtcccgccacccaaggcgctggaggggatcccggagcgc
gagttttttgtcaagtgggcagggctctcctactggcactgctcctgggtcaaggagctg
cagctggagctctaccacactgtgatgtaccgcaactaccaaaggaagaatgacatggat
gagccgccggccttcgactacggctctggggatgaggacagccagagggagaagcggaag
aacaaagatccgcagtacgccaagatggaggagcggttctaccgctatggcatcaagccc
gagtggatgatgatccaccgcatcctgaaccacagctttgataaaaagggagacattcat
tatctgatcaagtggaaagacctgccctatgaccagtgcacctgggagatcgacgacata
gacatcccgtactacgaaaacctcaaacagctctactggaatcacagggagctgatgctg
ggggaagacacgcgccctccaaagaagctgaacaagaaagggaaaaagctgaaagaggag
aagctagaaaagcccccagaaactcctattgttgatcctacggttaagtttgacaagcag
ccgtggtacattgatgccacaggaggcactctccatccttaccagctagaagggctaaac
tggctgagattttcctgggcccaagggactgacaccatcctggccgatgagatggggcta
gggaagaccgtgcagactattgtgttcttgtattccctgtacaaggagggccactcgaaa
gggccgtatctggtcagcgcccctctctccaccatcatcaactgggagcgtgagtttgag
atgtgggcacctgacttctacgttgtgacctacacgggggacaaagaaagccggtcagtc
atcagggaaaacgagttctcttttgaagacaatgccatccggagtggaaagaaggtcttc
cggatgaagaaggaagcccagatcaagttccatgtcctgctcacgtcctacgagctgatc
actattgatcaggcggtgctgggctcaatagagtgggcctgtctggtggtggatgaagca
cacaggctgaagaacaaccagtccaaattctttagagtattaaatagctacaaaatcgat
tacaagctgctgctcaccgggactccactccagaacaacttggaagagctcttccacctg
ctcaatttcctgactccggagaggtttaataacctggagggattcctggaggagtttgca
gacatctccaaggaggaccagatcaaaaagctccatgatctgctgggtcctcacatgctg
cggcggctcaaggcggatgtgttcaagaacatgccagccaagactgaactgatcgtgaga
gtggagcttagccagatgcagaagaagtactacaaatttatactgacaaggaattttgaa
gccttgaattcaaaaggtggtgggaaccaggtctcgttgctcaacatcatgatggatctg
aagaaatgttgtaatcatccatacctctttcctgtggcggctgtggaggcaccggttctg
cccaatggatcctatgatgggaattctttggttaaatcttctggaaagttgatgctgctc
caaaagatgctgaagaagttacgggatgggggccacagggttctgatcttctcccagatg
acaaagatgttggacctgttggaggatttcctggagtacgaaggctacaagtatgagcgg
atagacgggggcatcactggaggcctgcgccaggaagccatagacaggtttaatgctcct
ggtgctcagcagttctgctttctcctctctacccgcgctggtggtctgggcataaacctt
gctacggccgacacagtcattatttatgattctgactggaatccccacaatgacatccag
gcgttcagcagagctcaccgcattgggcagaacaagaaggtgatgatttaccgcttcgtg
acacgagcctctgttgaagagcgcatcactcaggtggccaaaaggaagatgatgctcacc
cacttggtggtccgtccagggcttggctcaaagtcgggctccatgaccaagcaagagctg
gatgacatcctcaaatttgggacagaagagctttttaaggatgatgtggaaggcatgatg
tctcagggccagcggattggcatgccggatgcggtcacccctttctctgacacactgtca
accaaaggcggtgcagtgactcctggcatgaaaaaaaagcacggtggcaccccaccaggt
gacaataaggatgtggatgacagcagtgtgattcactatgatgatgctgccatctctaag
cttctggaccggaaccaggatgcgactgatgacacagaactgcagaacatgaacgagtat
ctgagctcctttaaagtggcccagtatgttgtgagagaagaggatggtgtggaggaggtg
gaacgtgagatcatcaagcaggaggagaatgtagaccctgactactgggagaagctgcta
cggcaccactatgagcagcagcaggaagatctggccaggaacttagggaaagggaagaga
attcgcaagcaggtcaattacaacgatgcctcacaagaggaccaagagtggcaggatgag
ctctctgacaaccagtccgagtactccattggctctgaggatgaggatgaagactttgaa
gaaagaccagaaggtcagagtggcagaagacaatcacggagacagctgaagagtgaccga
gacaagcctctccctcctttgctggcaagagtcggggggaatattgaggttcttgggttc
aacgcccgtcagcgcaaggctttcctgaatgctatcatgcgctggggcatgcccccccag
gatgcgttcaattctcactggctggtccgggatctgcgagggaagagtgagaaagagttc
agggcctacgtctctctgttcatgagacacttgtgtgaacctggagcagatggtgctgaa
acctttgcagatggtgttccccgggaagggttgtcacgccagcacgtgctgactaggata
ggagttatgtcactagtaaggaagaaggtccaggagtttgagcacgtcaatgggaagtac
agcaccccagatctgattcttgaaggctcagagagcaagaagtccagtgagattgtttct
tcagaccctaacacgcctgtcccagccagcccagcgcatatgcacacggggcccgttgct
ctctcagataaaatagaaacacaactgggcttccaggaggaaaaggatcaagtagagcag
aagtccaagaaggtgtctgacagccaggtgcctgcaagtgctgagaaggtggaaagagaa
gaacatcaagaaagctctgaaaacaaagagaaagtgacagaagagaaacaagaagagagt
ggacaggccgagccttctccagagcctctggtgaaagatgaggcaattcaagaaaaagag
aagcctttggaaaagtcagagttgaacagcagtgcaggtaaaggggaggacaaagaagtc
aaaccagaggatgccaaggtggaagagaaggagcaaaatgagactcaacaaaatggtgaa
aaagaggaagaagaggaaggaaagaaggatgagagaaatgcaaacttcagattcatgttc
aacattgctgatggtggctttacagagttgcacacgctgtggcagaatgaggaaagagct
gccatctcctctggcaagatctatgatatctggcaccggagacacgactactggctgctg
gcaggaattgtcactcacggctatgcccgctggcaggacatccagaacgacccgcgctat
gtcattctgaatgaaccgttcaagtcggagatacacaaggggaactacctcgagatgaag
aacaagttccttgcccggcggttcaagttgctggagcaggccctggtgatagaggagcag
ctgcgaagggctgcctacctcaacatgactcaagaccccaatcacccggccatggcattg
aacgcccgtctggctgaagtggagtgccttgccgagagccaccagcatctctccaaagaa
tcccttgctgggaacaagcctgcgaatgccgtcctgcacaaagtgctgaaccagctggag
gagctgctgagcgacatgaaggccgacgtgacgcgcctgccgtccatgctctccaggata
ccgcccgtggccgcccggctgcagatgtccgagcggagcattctcagccgcctcaccacc
cggggcggcgaccccgccgtccagcagggctcctttggttcctcccagatctacaacaac
aactttgggccaaatttccgaggtcctggaccaggtgggattgtcaactacagtcagatg
cctctgggaccgtatgtgaccgcaagctccagcgggcctcgctccagccacccggatcag
aaagcagcagagtcgctgaaagacggcgccgccgtggaacggcaggggaagcacggcgac
gttatctgcatcgaagactag
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integrated database retrieval system
