Apteryx mantelli mantelli (North Island brown kiwi): 106493317
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Entry
106493317 CDS
T04298
Symbol
TAF1C
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106493317 (TAF1C)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
106493317 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
106493317
NCBI-ProteinID:
XP_013808791
LinkDB
All DBs
Position
Un
AA seq
702 aa
AA seq
DB search
SPCASLQAETTFVPRCGRTGESWEPADVAAVPFLRPNASCWVPSLVPQDILYRGVLHRKL
RSGKSGAALDFTKQLGHFFVDHPEDAFGSLGQLLHKNFYLGNTKLRRQARDTTIRMTSLV
EEINRLEARHGCPQQHFTSRVRWFSHLCRDWLFEVPLDLLADCVHDELVLQWASLLFDDS
STGGALAWLPPEDAGAHTGCLVYPGGQAMNQLYFQDVVVGEVPRARGSPAQFELNGRIRQ
VAAAQVDGEGFVGVRSDYHCGVWKVPGRTGAAPTPLQVIRTNVPASCLTVSPHLPGELAV
CTQSGAVYLWSVETGLQQLRQDPQTMFFRDHSPWRWNEFTAHPRVLSCADRTGLQCLDAR
APGRCHLDFFKVGEEAGCQQGERVVLPMYLGRAHPSQHLVATQFAVYVMDERLPLVPVLK
WAHMMKDPPLFAHVVPGGPGRSHKVLLGASRTQELLLLQYTGGSELACQLAGPPQKLHSI
SGCLQHLPAQLPHRHWLLQQRLGAPAAGLAAVPHARGQRESLLVFQLSEAGDVFYQTLTH
EAAQPRAPAGEDKDEAASSASPMLEAPFGSTPGSPPGSGGEEEEEIFYLSNLEVIVNEEE
EEEEEGTPAASEETQHPEEPCASPHPLPAVPSPAAAVRYRRWLKALFRDWRELPRHTGVR
GPPTISQKRLFTGKDLGPPWEQFMELGQAVPDTELDVIICSL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
tcaccttgtgcctccctccaggccgagacgacgttcgtgccccgctgcggcaggacgggc
gagagctgggagcctgccgacgtcgctgctgtgcccttcctgcgtcccaacgcgagttgc
tgggtcccctcgctcgtgcctcaggacatcctttaccgcggggtccttcacaggaagctc
cggtcaggcaagtctggagctgccctcgacttcaccaagcagctgggccacttctttgtg
gatcacccagaagatgcatttggctccttggggcaactgctgcacaagaacttctacctg
ggcaacaccaagctgaggagacaggcccgagacaccaccatccggatgacatccctggtt
gaggaaatcaaccggctggaggccaggcacggctgcccccagcagcacttcacctcccgc
gtccgctggttttcccacctgtgccgcgactggctgtttgaggtgccgctggacctgctg
gcggactgcgtgcatgacgaactggtgctgcagtgggccagcctgctctttgacgacagc
tccacagggggggccctggcctggctgccccccgaagacgcaggcgcacacacaggctgt
ctggtgtaccccggagggcaggctatgaaccagctctatttccaggacgtggtggtgggt
gaggtgccccgcgcccggggctccccagcacagtttgagctcaacggacgcatccggcag
gtggctgccgcccaggtggacggggaaggttttgtcggtgtccgctcggactatcactgc
ggtgtttggaaggtgccgggcaggacaggcgctgcccctaccccactgcaggtcatccgc
accaacgtgcctgcctcctgcctcaccgtcagccctcatctccccggggagctggccgtc
tgcacccagagcggagccgtctacctctggagcgtcgagacggggctacagcagctccgc
caggacccccagaccatgtttttccgggaccattcgccctggcgctggaacgagttcact
gcccacccacgggtgctgagctgcgctgaccgcaccggcctgcagtgcctggacgcacgg
gcacctgggagatgccacttggatttcttcaaggtgggtgaggaagccgggtgccagcag
ggagagcgcgtggtgctgcccatgtacctgggcagggctcacccctcccagcaccttgtt
gccacccagttcgcagtgtacgtgatggacgagcgcttgccgctggtgcctgtgctgaag
tgggcgcatatgatgaaggaccccccgctgtttgcccacgtggtgccaggggggcccggc
aggagccataaggtgctgcttggcgcgtcccgcacccaggagctgttgctgctgcaatac
acagggggcagcgagttggcctgccagcttgccgggcctccgcagaagctgcacagcatc
tccggctgcctgcagcacctgcccgcgcagctcccacaccggcactggctgctgcagcag
cgcctcggcgccccagctgccgggctggcagcggtgccgcatgcacgagggcaacgggag
tccctgctggttttccagctctccgaggctggggatgtcttctaccaaaccctgacacac
gaggcagcacagcccagggctcccgctggggaggacaaagatgaggcagcctccagcgct
tcccccatgctggaggctccgttcgggagcactcctgggtctccgcctggctctggtggc
gaggaggaggaagagatcttctacttgtccaacctggaggtgattgtcaacgaggaggaa
gaggaggaggaagagggcacgccagcagcttcagaagaaacccagcacccggaggagccc
tgtgccagcccccatcccttgccggctgtgcccagccccgctgctgccgtgcggtaccgc
cgctggctgaaggcgcttttcagggactggcgggagctgccccggcacacgggggtccgg
gggccccccaccatcagccagaagcgcctcttcaccgggaaggacctggggccgccgtgg
gagcagttcatggagctgggccaggcggtgccagacacagagctggacgtcatcatctgc
tcgctgtga
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