KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106493997
Entry
106493997         CDS       T04298                                 
Symbol
COL4A1
Name
(RefSeq) collagen type IV alpha 1 chain
  KO
K06237  collagen type IV alpha
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04382  Cornified envelope formation
aam04510  Focal adhesion
aam04512  ECM-receptor interaction
aam04518  Integrin signaling
aam04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106493997 (COL4A1)
   04518 Integrin signaling
    106493997 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106493997 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106493997 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    106493997 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aam04147]
    106493997 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:aam00536]
    106493997 (COL4A1)
Exosome [BR:aam04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106493997 (COL4A1)
Glycosaminoglycan binding proteins [BR:aam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106493997 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106493997
NCBI-ProteinID: XP_013809585
LinkDB
Position
Un
AA seq 1614 aa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NT seq 4845 nt   +upstreamnt  +downstreamnt
atgcaaggacctgaaggtccccctgggccaccagggcttaagggtgatactggagaacca
ggactgccaggaacaaaaggaacaagaggcccaccaggatcatcaggatatccaggaaac
ccaggccttcctggcattcctggacaagatggccctccaggtccacctggtattccagga
tgtaatggcacaaagggtgaaagaggtccagtaggtcccccaggtttaccaggattgact
ggaagcataggacctccaggacctcctggaatgaagggagatccaggtgaagttattggt
cttttacctcctagtgtgctaaaaggtgataaaggctttcctggtcaacctggactacct
ggtccacctggaaccccagggtttcagggaccaatggggccaccagggcttccaggagag
ccaggtcctccagggcaaccaggacccccaggtgagaagggctacatgggcttgggtttt
cagggtcccaaaggtgaaaagggagaacaaggagtaaggggcccccctggacctccgggc
ccagctccgcatgtgaaagaaaaaggaagtgaaattataaggggagaaaagggtgatcct
ggtgaaaagggtgaacagggtatcccaggattaccaggttcaggtttcaaaggggaaaag
ggtgaacctggaaagcctggtccacgtggaaagcctggaaaagatggtgaaccaggacca
aaaggagaacccggtttgcctggcgggtttgggattcctggacgacccggtgaacctggt
gtcaagggtgaaaaaggtgatcaaggtcttccagggcctccaggaagaattatagatact
ggaacagtggattcttttggtgaaaaaggagaccctggagtttcaggtttgccaggactg
aaaggtcaaaaaggtgaaaaaggtttccctggtatacaaggaattccaggtcttccaggt
cgacctgttccagatcgggtaggagcacctggtgtccctggagagagaggtgaaaaaggt
gaaaagggttctccaggattccctttacctggaccacctggaagagatggtttcccaggt
cctcctgggttgcctggcccaccaggtcctccaggagtaacagatggagttgatcagtgc
cagccaggagaacctggtgcaccaggtagacctggagctccaggacagcacggatttcca
ggagagatgggagagaaaggtgagaaaggtgattcctgtccctcatgtgaagtaggacct
cctggactcccaggaccacaagggccaccaggtccagcaggttttccgggacaagcgggt
ttcaaaggtgacagaggcttacctggacttgatggccttccaggcgtacctgggccgcca
ggcactccaggacttataggcagccctggggcaaaaggagaaccaggagatttttcttat
gaacctatcctgaaaggtgaaaagggagatcctggttttccagggcaaccaggtattcct
ggaagagaagggacaccaggaaaagatggcctgccaggtccccagggtccgaaaggagca
tcgggtacagctggattgaaaggagaacgtggtccccctggccaacctggattccctgga
gtacgtggtgaaagaggttttcctggtcctcctgggataggctcagcagggttacctggt
gacaaaggagacagaggctttgctggaaccccaggtttaccaggccttccaggggcaaaa
ggtgaagcaggacgaactgttcctctgcctggtcctcctggggcagatggccttcctggg
ccacctggtttccctggaccccaaggtgacaaagggaatcctgggctaccaggaagaccc
ggcctgccgggagaaaaaggtgctgttgggcagccaggtataggattccctggacctcca
ggacccaaaggtttccaaggtcagcctggctctcctggtcagccaggcactccaggaact
cctggcctggatggtttgccaggtgccccaggtttacaaggtcaaaaaggtgaacctgga
gtaggtctcccaggccctaagggattaccaggcccaccaggcccagctggtatccctgga
gaaaagggaaatccaggattgcctggcttacgtggcgagcaagggtttccagggattccg
ggtcagcaaggattccgaggtgaccctggtctccctggcttgcaaggtttacagggctct
ccaggtgcaccaggactaggcccgcagggatcaccaggacctgctggacaaccaggaccc
cagggaccaccaggatttcctggaataaaaggagaaaggggttttcctggtatcccaggt
ctagatatgccaggaccaaaaggggataaaggtagccagggccagcctggagtaccaggc
tctgtgggattacctggcctgcctggaccacaaggggcagttggactgaaaggatcggca
ggagccaaaggagaaatgggagttatgggaactcctggattgccagggtctcctggagca
gttggagatcgagggttccctggtgaaaaaggtagcccaggtttcaaaggagtaattgga
cctcaaggtgatcctggtgtcaagggagataaaggtgaagtaggtctcccgggaaaacct
ggaagcatggatggcatggacatggttagtctcaaaggccaaaagggagaccaaggagaa
aaaggggaccatggagcaacaggagaaaaagggttacgtggggagtatggacaaccagga
attccagggaaggatggtgaacctggtactccaggtcatccaggaccaaaaggtgatcaa
gggcccccggggtacccaggagatccaggaattccaggacaaaaaggatcagttggtgaa
atgggtttgccaggaacacctggagaaaaaggtctgccgggaattccaggttcaccaggc
acaccagggttccctggccaaaaaggtgaaaaaggagacaaaggagcagcaggttttcct
ggaattggctttccaggatctcctggtgagaagggagaaccgggaagaacaggtagtcca
ggcttatctggagagaagggtgaaaaaggtagcgcaggacttccaggaatgccgggttcc
ccaggtcccaaaggatcccctggcatggcaggatttccaggaagcccaggtcgccatgga
gaaaagggtgaaaaaggacttcctggcttaagtggcattccaggtttaaaaggagaacca
ggtgaaccgggtcttccgggtcctgttggttccactggacagaaaggtgaaccaggttat
gatgggattcctggtgcagctggtgcaaagggtgaacaaggtcttcctggtagaggactt
ccaggatttccgggtgcaaagggagataaaggtgcaaaaggtgacgtgggttttccagga
tccccagggagtccagggatcccaggtctgaaaggagaaccaggatatgcaggtccacca
ggccctaaaggcagccaaggtcttcctggactaccgggaagtgcgatggagggacctaag
ggagacagaggaccccaaggccaacctggccttccaggtttaccaggtccaacagggcca
ccaggacccccaggacttaaaggggccaaaggagaacaggggagcgatggctggcctggg
acccctgggggtccgggagtcaaaggtgacccaggattccagggcttgcctggtagtcca
ggtttaccaggagatattggtcaaaagggtgatttaggacctccaggagttccaggcgtt
ccaggtccaaaaggatctcctggcttcccaggtcttaaaggagagcgaggtgaccaaggt
cttcctggatctaaaggtttacaaggcccaccaggcccaccaggtgcttttcagcttgtt
aaaggggatcctggcttacctggccctgtaggaccagttggtctcaaaggattcccggga
cttccaggtcccaaaggacagcaaggggttacaggaccttcaggtatacctgggccacct
ggtagcccagggtttgatggtaaacctgggcaaaaaggagaagttggtccttatggtccc
ccagggcccagaggattccctggtccacctggtcctgaaggtttgcctggggttatgggc
ccaccaggtgcagcatctgttgctcatggcttccttgttaccagacacagtcagaccact
gaagaaccacagtgtccatttggaactaggctgatttaccatggttactccttgctctat
gtacaaggcaatgaaagagcacatggccaggatttgggcacagcagggagctgtcttcgt
aaatttagtactatgccattcttattctgcaatatcaacaacgtatgtaactttgcatcg
agaaatgactattcctactggctctccactcctgaacccatgccaatgagtatggctcct
atcactggtgataatatcagaccattcatcagcagatgctctgtgtgtgaggctcctgct
atgataatagccgttcacagtcaaacaattcaaataccgcaatgtcctgaaggctggagt
tcactttggattggttactcctttgtcatgcacaccagtgctggtgccgagggctctggc
caggccctggcctctccaggttcctgcctagaggagtttcgcagcgctcccttcattgaa
tgccatggccggggcacctgcaattattatgcaaatgcttacagcttctggcttgccact
atagagaggaatgagatgttcaagaaaccaacgccctcaacgttgaaagcaggggatctg
cgctcaaacgttagccgttgtcaagtctgtatgagaaaaacataa

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